Details for gene set MANALO_HYPOXIA

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	MANALO_HYPOXIA_DN
Enrichment Score (ES)	0.6449244
Normalized Enrichment Score (NES)	1.8976262
Nominal p-value	0.0
FDR q-value	0.0029008042
FWER p-Value	0.047

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HNRPD	1425142_a_at 1446083_at	59	3.935	0.0592	Yes
2	CCNF	1422513_at 1443807_x_at	132	3.226	0.1067	Yes
3	ZWINT	1423724_at 1427539_a_at 1427540_at 1429786_a_at 1429787_x_at 1444717_at 1455382_at	195	2.844	0.1487	Yes
4	MCM10	1433407_at 1433408_a_at 1454244_at	220	2.689	0.1899	Yes
5	SNRPD3	1422884_at 1422885_at 1449629_s_at	229	2.637	0.2310	Yes
6	NOLC1	1428869_at 1428870_at 1450087_a_at	258	2.467	0.2686	Yes
7	MCM6	1416251_at 1438852_x_at 1447756_x_at	280	2.372	0.3050	Yes
8	DNA2L	1438817_at 1452210_at 1457909_at	300	2.315	0.3405	Yes
9	ID1	1425895_a_at	358	2.138	0.3716	Yes
10	MCM5	1415945_at 1436808_x_at	521	1.778	0.3922	Yes
11	TRIP13	1429294_at 1429295_s_at 1446760_at	551	1.715	0.4178	Yes
12	CDC6	1417019_a_at	622	1.567	0.4393	Yes
13	UBE2S	1416726_s_at 1430962_at	911	1.217	0.4453	Yes
14	SNRPD1	1416336_s_at	926	1.209	0.4637	Yes
15	RFC3	1423700_at 1432538_a_at	1086	1.072	0.4733	Yes
16	RFC5	1452917_at	1102	1.062	0.4893	Yes
17	SKP2	1418969_at 1425072_at 1436000_a_at 1437033_a_at 1449293_a_at 1460247_a_at	1115	1.050	0.5053	Yes
18	POLE2	1427094_at 1431440_at	1190	1.000	0.5177	Yes
19	RNU3IP2	1451293_at	1346	0.915	0.5250	Yes
20	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	1348	0.913	0.5393	Yes
21	DHFR	1419172_at 1430750_at	1396	0.890	0.5511	Yes
22	POLD2	1448277_at	1620	0.785	0.5533	Yes
23	PA2G4	1420142_s_at 1423060_at 1435372_a_at 1450854_at 1460265_at	1643	0.770	0.5644	Yes
24	CTPS	1416563_at	1666	0.758	0.5753	Yes
25	NOL5A	1426533_at 1455035_s_at	1876	0.677	0.5764	Yes
26	MCM2	1434079_s_at 1448777_at	1953	0.651	0.5832	Yes
27	RRM2	1416120_at 1434437_x_at 1448226_at	2066	0.615	0.5878	Yes
28	MRPL46	1449004_at	2067	0.615	0.5974	Yes
29	MAD2L1	1422460_at	2085	0.611	0.6063	Yes
30	UMPS	1431652_at 1434859_at 1451445_at 1455832_a_at	2202	0.578	0.6101	Yes
31	TSFM	1432170_at 1452698_at	2203	0.578	0.6192	Yes
32	RRS1	1416998_at 1456865_x_at	2302	0.553	0.6234	Yes
33	ORC6L	1417037_at	2400	0.531	0.6273	Yes
34	MRPL40	1448849_at	2546	0.499	0.6285	Yes
35	ILF3	1422546_at 1436802_at 1460669_at	2570	0.492	0.6352	Yes
36	RPP30	1423373_at	2605	0.486	0.6413	Yes
37	HNRPDL	1420093_s_at 1420094_at 1424251_a_at 1424252_at 1428224_at 1428225_s_at 1449039_a_at 1456698_s_at	2826	0.448	0.6383	Yes
38	MRPS12	1448799_s_at	2836	0.445	0.6449	Yes
39	PRPS1	1416052_at	3171	0.392	0.6358	No
40	PSME3	1418078_at 1418079_at 1438509_at	3225	0.385	0.6394	No
41	CCNE1	1416492_at 1441910_x_at	3304	0.375	0.6418	No
42	BRCA1	1424629_at 1424630_a_at 1427698_at 1443763_at 1451417_at	3894	0.317	0.6198	No
43	DDX21	1448270_at 1448271_a_at	4392	0.282	0.6015	No
44	BARD1	1420594_at	5359	0.237	0.5611	No
45	DDX23	1430050_at	5507	0.231	0.5580	No
46	USP39	1437007_x_at 1460209_at	5768	0.221	0.5496	No
47	RRM1	1415878_at 1440073_at 1448127_at	5919	0.215	0.5461	No
48	DHX35	1452693_at	6003	0.212	0.5456	No
49	MCM4	1416214_at 1436708_x_at	6049	0.210	0.5469	No
50	MFN2	1441424_at 1448131_at 1451900_at	6100	0.209	0.5479	No
51	USP1	1423674_at 1423675_at 1451080_at	7645	0.159	0.4797	No
52	PPARD	1425703_at 1439797_at	7782	0.155	0.4759	No
53	ELK1	1421896_at 1421897_at 1446390_at	8178	0.145	0.4602	No
54	TFAM	1448224_at 1456215_at	8618	0.134	0.4422	No
55	DDX11	1438447_at 1441062_at	8741	0.131	0.4387	No
56	CDC7	1426002_a_at 1426021_a_at	8770	0.130	0.4394	No
57	NEK4	1427639_a_at 1449861_at	9166	0.120	0.4232	No
58	RPL39	1423032_at 1450840_a_at	9661	0.108	0.4023	No
59	PRC1	1423774_a_at 1423775_s_at	9674	0.108	0.4035	No
60	MAZ	1427099_at	11861	0.056	0.3044	No
61	DDX18	1416070_a_at 1416071_at 1456000_at	12166	0.048	0.2912	No
62	GTPBP4	1423142_a_at 1423143_at 1450873_at	13357	0.019	0.2371	No
63	POLG	1423272_at 1423273_at 1437564_at	15012	-0.030	0.1619	No
64	PSMD11	1429370_a_at 1432726_at 1456059_at 1456104_at	15836	-0.063	0.1252	No
65	MLLT10	1419772_at 1420869_at 1420870_at 1438525_at 1442070_at 1443500_at	16264	-0.083	0.1070	No
66	BOP1	1423264_at 1430491_at	16603	-0.105	0.0932	No
67	CCNE2	1422535_at	16866	-0.123	0.0831	No
68	HNRPU	1423050_s_at 1423051_at 1434390_at 1434391_at 1450849_at	18098	-0.251	0.0308	No
69	MPHOSPH9	1419909_at 1419910_at 1431053_at 1438063_at 1440915_at 1449659_s_at	18453	-0.301	0.0193	No
70	RB1	1417850_at 1441494_at 1444400_at 1444454_at 1457447_at	18543	-0.312	0.0202	No
71	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	19530	-0.519	-0.0168	No
72	SNAPC5	1427999_at	19800	-0.594	-0.0197	No
73	PSME4	1426823_s_at 1426824_at 1440511_at 1445147_at 1446464_at 1452211_at	20346	-0.797	-0.0321	No
74	UCHL5	1419452_at 1419453_at 1455086_at 1459011_at	20377	-0.811	-0.0207	No
75	ATIC	1428506_at 1452811_at	20452	-0.847	-0.0108	No
76	RFC2	1417503_at 1457638_x_at 1457669_x_at	20627	-0.935	-0.0040	No
77	MCM3	1420029_at 1426653_at	21483	-1.983	-0.0119	No
78	POLR3K	1422752_at 1422753_a_at 1439266_a_at 1440735_at 1450737_at 1456731_x_at	21518	-2.071	0.0191	No