Details for gene set FLECHNER_KIDNEY_TRANSPLANT_REJECTION

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	FLECHNER_KIDNEY_TRANSPLANT_REJECTION_UP
Enrichment Score (ES)	-0.58871233
Normalized Enrichment Score (NES)	-1.7126247
Nominal p-value	0.003960396
FDR q-value	0.16237326
FWER p-Value	0.863

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	GZMA	1417898_a_at	140	3.145	0.0408	No
2	CD53	1439589_at 1448617_at 1459744_at	381	2.091	0.0612	No
3	MMP9	1416298_at 1448291_at	529	1.771	0.0810	No
4	CORO1A	1416246_a_at 1435288_at 1455269_a_at	597	1.629	0.1024	No
5	POLR2A	1422311_a_at 1426242_at 1458710_at	664	1.498	0.1219	No
6	FCER1G	1418340_at	768	1.376	0.1378	No
7	PTPRC	1422124_a_at 1440165_at	795	1.337	0.1567	No
8	LGALS9	1421217_a_at	1469	0.853	0.1387	No
9	FCGR3A	1425225_at 1448620_at	2523	0.504	0.0981	No
10	ECGF1	1432181_s_at	2834	0.446	0.0906	No
11	PSMB8	1422962_a_at 1444619_x_at	2873	0.439	0.0954	No
12	RAB27A	1425284_a_at 1425285_a_at 1429123_at 1454438_at	3322	0.372	0.0805	No
13	S100A4	1424542_at	4206	0.295	0.0446	No
14	HCLS1	1418842_at	4553	0.273	0.0328	No
15	DARC	1432273_a_at	4676	0.267	0.0313	No
16	CD14	1417268_at	4702	0.266	0.0341	No
17	TNFRSF1B	1418099_at 1448951_at	5527	0.230	-0.0001	No
18	ALDOC	1424714_at 1451461_a_at	5701	0.223	-0.0047	No
19	EIF2AK2	1422005_at 1422006_at 1440866_at	6192	0.205	-0.0240	No
20	CFD	1417867_at	6323	0.201	-0.0270	No
21	CUGBP2	1423895_a_at 1440322_at 1441072_at 1443545_at 1444152_at 1444533_at 1445306_at 1446670_at 1450069_a_at 1451154_a_at 1451155_at 1457553_at 1458263_at	6427	0.197	-0.0287	No
22	MOXD1	1422643_at	7492	0.164	-0.0749	No
23	VSIG4	1451651_at	9095	0.122	-0.1464	No
24	ADAM15	1416080_at 1425170_a_at 1438760_x_at 1454206_a_at	9641	0.109	-0.1697	No
25	LY86	1422903_at	10655	0.085	-0.2147	No
26	CSTA	1435760_at	11937	0.054	-0.2725	No
27	RAB31	1416165_at 1431691_a_at	12278	0.046	-0.2874	No
28	AOAH	1450764_at 1460156_at	12738	0.035	-0.3078	No
29	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	13833	0.006	-0.3578	No
30	CCL5	1418126_at	14085	-0.001	-0.3693	No
31	UBE2L6	1417172_at 1447633_x_at	14863	-0.025	-0.4044	No
32	IL10RB	1419455_at	15061	-0.032	-0.4130	No
33	USP9X	1420922_at 1420923_at 1428193_at 1428194_at 1450037_at 1450038_s_at 1450039_at	15138	-0.034	-0.4159	No
34	CD163	1419144_at	15369	-0.044	-0.4258	No
35	APOC1	1417561_at	15565	-0.051	-0.4340	No
36	SLA	1420818_at 1420819_at 1441761_at 1447813_x_at	15852	-0.064	-0.4461	No
37	RAC2	1417620_at 1440208_at	16178	-0.079	-0.4598	No
38	LST1	1425548_a_at	16332	-0.087	-0.4655	No
39	C1QB	1417063_at 1434366_x_at 1437726_x_at 1457322_at	16476	-0.097	-0.4705	No
40	IFITM1	1424254_at	16803	-0.119	-0.4837	No
41	PDE6D	1416843_at	17051	-0.138	-0.4929	No
42	AIF1	1418204_s_at	17325	-0.164	-0.5029	No
43	SFN	1448612_at	17471	-0.178	-0.5069	No
44	TYROBP	1450792_at	17866	-0.220	-0.5216	No
45	CD48	1427301_at	19317	-0.467	-0.5809	No
46	TNFRSF7	1452389_at	19488	-0.507	-0.5811	Yes
47	CCND3	1415907_at 1437584_at 1444323_at 1446567_at 1447434_at 1457549_at	19489	-0.507	-0.5735	Yes
48	CXCR4	1448710_at	19495	-0.509	-0.5661	Yes
49	IFI30	1422476_at	19514	-0.517	-0.5592	Yes
50	LCP1	1415983_at 1448160_at	19572	-0.530	-0.5538	Yes
51	INPP5D	1418110_a_at 1424195_a_at	19788	-0.590	-0.5548	Yes
52	LCK	1425396_a_at 1439145_at 1439146_s_at 1457917_at	19798	-0.593	-0.5463	Yes
53	RGS10	1416882_at	19812	-0.598	-0.5379	Yes
54	RHOH	1429319_at 1441385_at 1443015_at	20029	-0.669	-0.5378	Yes
55	IL10RA	1437808_x_at 1448731_at 1456173_at	20476	-0.860	-0.5453	Yes
56	GBP2	1418240_at 1435906_x_at	20519	-0.880	-0.5340	Yes
57	CD8A	1440164_x_at 1440811_x_at	20843	-1.091	-0.5324	Yes
58	LAPTM5	1426025_s_at 1436905_x_at 1447742_at 1459841_x_at	20894	-1.142	-0.5175	Yes
59	PIM2	1417216_at	20918	-1.164	-0.5011	Yes
60	ITGB2	1450678_at	20924	-1.167	-0.4838	Yes
61	GLUL	1426235_a_at 1426236_a_at	21020	-1.262	-0.4692	Yes
62	CD3D	1422828_at	21050	-1.299	-0.4511	Yes
63	UBC	1420494_x_at 1425965_at 1425966_x_at 1432827_x_at 1437666_x_at 1454373_x_at	21150	-1.420	-0.4343	Yes
64	LCN2	1427747_a_at	21308	-1.632	-0.4170	Yes
65	CD52	1460218_at	21414	-1.824	-0.3944	Yes
66	ISG20	1419569_a_at	21521	-2.074	-0.3681	Yes
67	RASSF2	1428392_at 1444889_at	21522	-2.075	-0.3370	Yes
68	CD2	1418770_at	21523	-2.075	-0.3059	Yes
69	WARS	1415694_at 1425106_a_at 1434813_x_at 1437832_x_at	21628	-2.373	-0.2750	Yes
70	PRKCB1	1423478_at 1438981_at 1443144_at 1459674_at 1460419_a_at	21636	-2.405	-0.2393	Yes
71	DOCK2	1422808_s_at 1437282_at 1438334_at 1459382_at	21660	-2.487	-0.2030	Yes
72	GMFG	1419193_a_at 1419194_s_at	21717	-2.780	-0.1639	Yes
73	IL4R	1421034_a_at 1423996_a_at 1447858_x_at	21800	-3.148	-0.1204	Yes
74	STAT1	1420915_at 1440481_at 1450033_a_at 1450034_at	21816	-3.247	-0.0723	Yes
75	S100A8	1419394_s_at	21925	-5.183	0.0005	Yes