Details for gene set FERRANDO_MLL_T_ALL

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	FERRANDO_MLL_T_ALL_DN
Enrichment Score (ES)	0.61959857
Normalized Enrichment Score (NES)	1.8526955
Nominal p-value	0.0
FDR q-value	0.0073528485
FWER p-Value	0.137

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COX8A	1416112_at 1436409_at 1448222_x_at	7	6.333	0.0771	Yes
2	EEF1D	1428135_a_at 1439439_x_at 1449506_a_at 1459754_x_at	14	5.368	0.1425	Yes
3	HINT1	1424017_a_at 1424018_at 1457286_at	16	5.273	0.2069	Yes
4	DUT	1419269_at 1419270_a_at	30	4.672	0.2635	Yes
5	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	110	3.370	0.3011	Yes
6	POLA2	1425794_at 1448369_at 1456713_at	144	3.131	0.3378	Yes
7	DDX39	1423643_at 1438168_x_at 1438287_x_at 1451065_a_at 1455814_x_at	239	2.581	0.3651	Yes
8	SFRS3	1416150_a_at 1416151_at 1416152_a_at 1454993_a_at	315	2.251	0.3892	Yes
9	GOT2	1417715_a_at 1417716_at	428	1.978	0.4083	Yes
10	MCM5	1415945_at 1436808_x_at	521	1.778	0.4258	Yes
11	SLC29A1	1451782_a_at	540	1.738	0.4462	Yes
12	SLC1A5	1416629_at 1440379_at	560	1.701	0.4662	Yes
13	TOP2A	1427724_at 1442454_at 1454694_a_at	589	1.644	0.4850	Yes
14	SORD	1426584_a_at 1438183_x_at	838	1.289	0.4894	Yes
15	LMNB1	1423520_at 1423521_at	844	1.278	0.5048	Yes
16	UBE2S	1416726_s_at 1430962_at	911	1.217	0.5167	Yes
17	MYC	1424942_a_at	1043	1.111	0.5243	Yes
18	NUP93	1424291_at	1133	1.036	0.5329	Yes
19	ACAA2	1428145_at 1428146_s_at 1455061_a_at	1176	1.007	0.5433	Yes
20	PLP2	1453572_a_at	1329	0.922	0.5476	Yes
21	MX2	1419676_at	1368	0.900	0.5569	Yes
22	RANBP1	1422547_at	1425	0.874	0.5650	Yes
23	EIF3S9	1426674_at	1471	0.852	0.5733	Yes
24	HADH	1436756_x_at 1455972_x_at 1460184_at	1483	0.846	0.5832	Yes
25	POLD2	1448277_at	1620	0.785	0.5866	Yes
26	STRA13	1416553_at	1633	0.775	0.5955	Yes
27	HPRT1	1448736_a_at	1689	0.746	0.6021	Yes
28	HMGA1	1416184_s_at	1840	0.692	0.6037	Yes
29	MCM2	1434079_s_at 1448777_at	1953	0.651	0.6065	Yes
30	ITPKA	1424037_at	1955	0.651	0.6144	Yes
31	USP10	1448230_at	2012	0.632	0.6196	Yes
32	TYMS	1427810_at 1427811_at 1438690_at 1442192_at	2603	0.487	0.5986	No
33	UBE2C	1452954_at	2626	0.483	0.6035	No
34	PSMA2	1448206_at	2629	0.483	0.6093	No
35	AGTRL1	1423037_at 1438651_a_at	3465	0.356	0.5754	No
36	S100A4	1424542_at	4206	0.295	0.5452	No
37	PKMYT1	1418481_at 1438601_at	4550	0.273	0.5329	No
38	BARD1	1420594_at	5359	0.237	0.4988	No
39	CDK2	1416873_a_at 1447617_at	5549	0.229	0.4929	No
40	HMGN2	1433507_a_at	5868	0.217	0.4811	No
41	RRM1	1415878_at 1440073_at 1448127_at	5919	0.215	0.4814	No
42	TRIP12	1423898_a_at 1423899_at 1423900_at 1423901_at 1440314_at 1443125_at 1447073_at 1451158_at	6380	0.199	0.4628	No
43	TFDP2	1435344_at 1437174_at 1443962_at 1445873_at	6508	0.195	0.4594	No
44	PCNA	1417947_at	7044	0.177	0.4371	No
45	ATP5G3	1454661_at	8034	0.148	0.3936	No
46	GCGR	1450127_a_at	8205	0.144	0.3876	No
47	HPCA	1425833_a_at 1450930_at	8632	0.134	0.3698	No
48	KHSRP	1428174_x_at 1436813_x_at 1452690_at	8684	0.132	0.3690	No
49	CSE1L	1448809_at	9020	0.123	0.3552	No
50	IGFBP2	1454159_a_at	10916	0.078	0.2695	No
51	PRRX2	1432331_a_at	11123	0.074	0.2610	No
52	PSMB2	1444377_at 1448262_at 1459641_at	11183	0.073	0.2592	No
53	SDHA	1426688_at 1426689_s_at 1445317_at	11345	0.069	0.2527	No
54	PRDX6	1423223_a_at 1442878_at	14929	-0.027	0.0891	No
55	BCLAF1	1428844_a_at 1428845_at 1436023_at 1438089_a_at	14963	-0.028	0.0879	No
56	LST1	1425548_a_at	16332	-0.087	0.0264	No
57	SLC9A1	1417397_at	16705	-0.112	0.0108	No
58	CSNK1G1	1428806_at 1438246_at 1444964_at	16718	-0.113	0.0116	No
59	PSMA6	1416506_at 1435316_at 1435317_x_at 1437144_x_at	17094	-0.142	-0.0038	No
60	EPS15	1419251_at 1430152_at 1440729_at	17699	-0.201	-0.0290	No
61	LBR	1415829_at	19278	-0.456	-0.0956	No
62	KPNB1	1416925_at 1434357_a_at 1448526_at 1451967_x_at	19279	-0.456	-0.0900	No
63	PLCB2	1452481_at	19419	-0.489	-0.0904	No
64	VBP1	1421750_a_at	20229	-0.746	-0.1183	No
65	TMEM131	1448396_at	20271	-0.772	-0.1107	No
66	TCEB1	1427914_a_at 1427915_s_at 1436226_at 1452593_a_at	20637	-0.942	-0.1159	No
67	AP3S1	1422593_at	20727	-1.015	-0.1075	No
68	FYB	1452117_a_at	20961	-1.211	-0.1034	No
69	PPP2R2A	1429715_at 1437730_at 1453260_a_at	21008	-1.250	-0.0902	No
70	GLUL	1426235_a_at 1426236_a_at	21020	-1.262	-0.0753	No
71	MAPKAPK3	1434815_a_at 1437494_at	21074	-1.319	-0.0616	No
72	PTP4A2	1420612_s_at 1420613_at 1435129_at 1460707_at	21314	-1.640	-0.0525	No
73	APLP2	1421887_a_at 1421888_x_at 1421889_a_at 1423739_x_at 1432344_a_at 1446786_at	21505	-2.043	-0.0362	No
74	CD2	1418770_at	21523	-2.075	-0.0116	No
75	DOCK2	1422808_s_at 1437282_at 1438334_at 1459382_at	21660	-2.487	0.0126	No