Details for gene set CALCINEURIN_NF_AT

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	CALCINEURIN_NF_AT_SIGNALING
Enrichment Score (ES)	-0.5522046
Normalized Enrichment Score (NES)	-1.662017
Nominal p-value	0.0
FDR q-value	0.20067726
FWER p-Value	0.984

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CEBPB	1418901_at 1427844_a_at	208	2.772	0.0290	No
2	NFKBIB	1421266_s_at 1446718_at	224	2.680	0.0655	No
3	CDKN1A	1421679_a_at 1424638_at	689	1.463	0.0646	No
4	PTPRC	1422124_a_at 1440165_at	795	1.337	0.0784	No
5	CNR1	1419425_at 1434172_at	930	1.208	0.0890	No
6	ITK	1417171_at 1430833_at 1452518_a_at 1456836_at 1457120_at	1018	1.129	0.1007	No
7	CALM3	1426710_at 1438825_at 1438826_x_at 1450864_at	1103	1.061	0.1116	No
8	CALM2	1422414_a_at 1423807_a_at	1171	1.010	0.1225	No
9	HRAS	1422407_s_at 1424132_at	1741	0.725	0.1066	No
10	MAPK14	1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at	2079	0.612	0.0996	No
11	CABIN1	1433686_at 1437794_at 1440596_at	2121	0.599	0.1061	No
12	PIN1	1416228_at	2127	0.598	0.1142	No
13	MAPK8	1420931_at 1420932_at 1437045_at 1440856_at 1457936_at	2363	0.538	0.1109	No
14	RPL13A	1417608_a_at 1433928_a_at 1455001_x_at 1455485_x_at	2521	0.504	0.1107	No
15	FCGR3A	1425225_at 1448620_at	2523	0.504	0.1177	No
16	IL10	1450330_at	2846	0.444	0.1091	No
17	FKBP1B	1449429_at	2878	0.438	0.1137	No
18	CSNK2B	1416728_at	3005	0.419	0.1138	No
19	MEF2B	1421541_a_at	3255	0.381	0.1077	No
20	FOSL1	1417487_at 1417488_at	3849	0.321	0.0850	No
21	MEF2A	1421252_a_at 1425426_a_at 1427185_at 1427186_a_at 1452347_at	4244	0.292	0.0710	No
22	GATA4	1418863_at 1418864_at 1441364_at	4673	0.268	0.0552	No
23	IL4	1449864_at	4912	0.257	0.0478	No
24	BAD	1416582_a_at 1416583_at	4939	0.255	0.0502	No
25	CSF2	1427429_at	5226	0.242	0.0405	No
26	IL3	1450566_at	6633	0.190	-0.0213	No
27	PAK1	1420979_at 1420980_at 1450070_s_at 1459029_at	7172	0.174	-0.0435	No
28	SP1	1418180_at 1448994_at 1454852_at	8439	0.138	-0.0995	No
29	FCER1A	1421775_at	8449	0.138	-0.0980	No
30	IFNG	1425947_at	8785	0.130	-0.1115	No
31	IL2RA	1420691_at 1420692_at	9422	0.113	-0.1391	No
32	TNF	1419607_at	9455	0.113	-0.1390	No
33	CD3E	1422105_at 1445748_at	9934	0.101	-0.1594	No
34	IL13	1420802_at	10244	0.094	-0.1723	No
35	OPRD1	1422121_at	10321	0.092	-0.1745	No
36	PPIA	1417451_a_at	10595	0.086	-0.1858	No
37	IL1B	1449399_a_at	10824	0.081	-0.1951	No
38	NFATC4	1423380_s_at 1432821_at 1454369_a_at	10981	0.077	-0.2012	No
39	NCK2	1416796_at 1416797_at 1458432_at	11200	0.072	-0.2101	No
40	IFNA1	1450564_x_at	11304	0.070	-0.2139	No
41	NPPB	1450791_at	11469	0.066	-0.2205	No
42	XPO5	1428560_at 1451468_s_at	11737	0.059	-0.2319	No
43	GRLF1	1434009_at 1440675_at 1442181_at	13278	0.021	-0.3021	No
44	NUP214	1434351_at 1456503_at 1457815_at	13511	0.015	-0.3125	No
45	ACTB	1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at	13833	0.006	-0.3271	No
46	GSK3A	1435638_at	14111	-0.002	-0.3397	No
47	NFKB2	1425902_a_at 1429128_x_at	14187	-0.004	-0.3431	No
48	IFNB1	1422305_at	14608	-0.017	-0.3621	No
49	IL6	1450297_at	14615	-0.017	-0.3622	No
50	PPP3CC	1420743_a_at 1430025_at	15477	-0.048	-0.4009	No
51	MYF5	1420757_at	15613	-0.052	-0.4064	No
52	CALM1	1417365_a_at 1417366_s_at 1433592_at 1454611_a_at 1455571_x_at	15628	-0.053	-0.4063	No
53	SLA	1420818_at 1420819_at 1441761_at 1447813_x_at	15852	-0.064	-0.4156	No
54	NFATC1	1417621_at 1425761_a_at 1428479_at 1447084_at 1447085_s_at	15972	-0.069	-0.4201	No
55	TRPV6	1419615_at	16299	-0.085	-0.4338	No
56	NFATC2	1425901_at 1425990_a_at 1426031_a_at 1426032_at 1439205_at 1440426_at	16317	-0.086	-0.4334	No
57	MAPK9	1421876_at 1421877_at 1421878_at	16802	-0.119	-0.4539	No
58	SFN	1448612_at	17471	-0.178	-0.4820	No
59	CAMK2B	1448676_at 1455869_at	18040	-0.244	-0.5046	No
60	TRAF2	1451233_at	18355	-0.288	-0.5150	No
61	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	18708	-0.338	-0.5264	No
62	NFKBIE	1431843_a_at 1458299_s_at	18998	-0.394	-0.5342	No
63	VAV1	1422932_a_at	19214	-0.442	-0.5379	No
64	P2RX7	1419853_a_at 1422218_at 1439787_at	19351	-0.474	-0.5375	No
65	RELA	1419536_a_at	19403	-0.485	-0.5331	No
66	CTLA4	1419334_at	19438	-0.493	-0.5278	No
67	MEF2D	1421388_at 1434487_at 1436642_x_at 1437300_at 1458901_at	19516	-0.517	-0.5241	No
68	VEGF	1420909_at 1451959_a_at	20130	-0.707	-0.5424	Yes
69	SP3	1431804_a_at 1459360_at	20191	-0.732	-0.5350	Yes
70	ICOS	1421930_at 1421931_at 1436598_at	20279	-0.774	-0.5282	Yes
71	VAV3	1417122_at 1417123_at 1446795_at 1448600_s_at 1458630_at	20714	-1.006	-0.5341	Yes
72	FOS	1423100_at	20795	-1.059	-0.5231	Yes
73	CD3G	1419178_at	20877	-1.120	-0.5112	Yes
74	JUNB	1415899_at	20884	-1.130	-0.4958	Yes
75	BCL2	1422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at	20911	-1.157	-0.4809	Yes
76	CSNK2A1	1419034_at 1419035_s_at 1419036_at 1419037_at 1419038_a_at 1453427_at	21003	-1.246	-0.4678	Yes
77	EP300	1434765_at	21052	-1.301	-0.4519	Yes
78	GATA3	1448886_at	21135	-1.401	-0.4362	Yes
79	CAMK4	1421941_at 1426167_a_at 1439843_at 1442822_at 1452572_at	21229	-1.528	-0.4192	Yes
80	PPP3R1	1421786_at 1433591_at 1450368_a_at	21405	-1.812	-0.4021	Yes
81	MAP2K7	1421416_at 1425393_a_at 1425512_at 1425513_at 1440442_at 1451736_a_at 1457182_at	21434	-1.870	-0.3774	Yes
82	CD69	1428735_at	21507	-2.047	-0.3523	Yes
83	PPP3CB	1427468_at 1428473_at 1428474_at 1433835_at 1446149_at 1459378_at	21553	-2.158	-0.3244	Yes
84	NFATC3	1419976_s_at 1452497_a_at	21574	-2.204	-0.2947	Yes
85	TGFB1	1420653_at 1445360_at	21809	-3.227	-0.2606	Yes
86	GSK3B	1434439_at 1437001_at 1439931_at 1439949_at 1451020_at 1454958_at	21817	-3.254	-0.2157	Yes
87	CREBBP	1434633_at 1435224_at 1436983_at 1444856_at 1457641_at 1459804_at	21856	-3.508	-0.1687	Yes
88	VAV2	1421272_at 1435065_x_at 1435244_at 1458758_at	21875	-3.671	-0.1186	Yes
89	EGR2	1427682_a_at 1427683_at	21904	-4.293	-0.0602	Yes
90	EGR3	1421486_at 1436329_at	21908	-4.438	0.0013	Yes