Details for gene set REACTOME_CELL_CYCLE

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	REACTOME_CELL_CYCLE_CHECKPOINTS
Enrichment Score (ES)	0.6560747
Normalized Enrichment Score (NES)	1.906924
Nominal p-value	0.0
FDR q-value	0.0034561907
FWER p-Value	0.027

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PSMA1	1415695_at 1436769_at 1436770_x_at 1458292_at	8	6.245	0.0979	Yes
2	BUB3	1416815_s_at 1448058_s_at 1448473_at 1459104_at 1459918_at	24	4.996	0.1757	Yes
3	CCNB1	1419943_s_at 1419944_at	88	3.586	0.2292	Yes
4	TP53	1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at	111	3.368	0.2812	Yes
5	MCM10	1433407_at 1433408_a_at 1454244_at	220	2.689	0.3186	Yes
6	MCM6	1416251_at 1438852_x_at 1447756_x_at	280	2.372	0.3532	Yes
7	MCM5	1415945_at 1436808_x_at	521	1.778	0.3702	Yes
8	CDKN1A	1421679_a_at 1424638_at	689	1.463	0.3855	Yes
9	WEE1	1416773_at 1416774_at	753	1.388	0.4045	Yes
10	RFC4	1424321_at 1438161_s_at	788	1.350	0.4242	Yes
11	PSMB9	1450696_at	978	1.164	0.4338	Yes
12	PSMD7	1432820_at 1451056_at 1454368_at	999	1.147	0.4509	Yes
13	RFC3	1423700_at 1432538_a_at	1086	1.072	0.4639	Yes
14	RFC5	1452917_at	1102	1.062	0.4799	Yes
15	CDC20	1416664_at 1439377_x_at 1439394_x_at	1125	1.041	0.4953	Yes
16	RPA2	1416433_at 1454011_a_at	1307	0.930	0.5016	Yes
17	CCNB2	1450920_at	1372	0.898	0.5128	Yes
18	CDC45L	1416575_at 1457838_at	1397	0.889	0.5257	Yes
19	PSMB3	1417052_at	1556	0.815	0.5313	Yes
20	PSMA5	1424681_a_at 1434356_a_at	1570	0.805	0.5433	Yes
21	ORC1L	1422663_at 1443172_at	1723	0.732	0.5479	Yes
22	CDC25C	1422252_a_at	1745	0.723	0.5583	Yes
23	BUB1B	1416961_at 1447362_at 1447363_s_at	1775	0.711	0.5682	Yes
24	PSMC1	1416005_at	1843	0.691	0.5760	Yes
25	PSMA7	1423567_a_at 1423568_at	1912	0.664	0.5833	Yes
26	MCM2	1434079_s_at 1448777_at	1953	0.651	0.5917	Yes
27	PSMC4	1416290_a_at 1416291_at	1988	0.642	0.6003	Yes
28	PSMB10	1448632_at	2021	0.629	0.6087	Yes
29	PSMB6	1448822_at	2044	0.622	0.6175	Yes
30	MAD2L1	1422460_at	2085	0.611	0.6252	Yes
31	PSMA4	1460339_at	2170	0.587	0.6306	Yes
32	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	2279	0.560	0.6345	Yes
33	PSMB5	1415676_a_at	2348	0.542	0.6399	Yes
34	PSMB1	1420052_x_at 1420053_at 1448166_a_at	2470	0.514	0.6424	Yes
35	UBE2C	1452954_at	2626	0.483	0.6430	Yes
36	PSMA2	1448206_at	2629	0.483	0.6505	Yes
37	ATM	1421205_at 1428830_at	2801	0.453	0.6498	Yes
38	RPA1	1423293_at 1437309_a_at 1441240_at	2905	0.433	0.6518	Yes
39	RAD1	1448414_at	2960	0.426	0.6561	Yes
40	PSME3	1418078_at 1418079_at 1438509_at	3225	0.385	0.6500	No
41	PSMC3	1416282_at	3317	0.373	0.6518	No
42	PSMD3	1448479_at	3472	0.355	0.6503	No
43	PSMC5	1415740_at	3784	0.326	0.6412	No
44	PSMD10	1436559_a_at	4168	0.296	0.6283	No
45	PSMD14	1421751_a_at 1446521_at 1457765_at 1459734_at	4174	0.296	0.6328	No
46	PSMD2	1415831_at	4564	0.273	0.6193	No
47	PSMD8	1423296_at	4842	0.259	0.6107	No
48	PSMD9	1423386_at 1423387_at 1444321_at 1447670_at	5504	0.231	0.5841	No
49	CDK2	1416873_a_at 1447617_at	5549	0.229	0.5856	No
50	MCM4	1416214_at 1436708_x_at	6049	0.210	0.5661	No
51	PSMD5	1423234_at	6087	0.209	0.5677	No
52	PSME1	1417056_at	6301	0.201	0.5611	No
53	PSMA3	1448442_a_at	7498	0.164	0.5090	No
54	ORC5L	1415830_at 1441601_at	8593	0.134	0.4611	No
55	CDC7	1426002_a_at 1426021_a_at	8770	0.130	0.4551	No
56	CHEK1	1420031_at 1420032_at 1439208_at 1449708_s_at 1450677_at	9076	0.122	0.4430	No
57	PSMB4	1438984_x_at 1451205_at	10735	0.083	0.3685	No
58	PSMB2	1444377_at 1448262_at 1459641_at	11183	0.073	0.3492	No
59	CDC27	1426076_at 1433848_at 1433849_at 1454739_at	11926	0.054	0.3161	No
60	RAD9B	1425800_at 1439955_at	12374	0.044	0.2963	No
61	ORC4L	1423336_at 1423337_at 1431172_at 1453804_a_at	12930	0.031	0.2714	No
62	RPA3	1448938_at	14354	-0.009	0.2065	No
63	HUS1	1418308_at 1425366_a_at	15503	-0.049	0.1547	No
64	PSMD11	1429370_a_at 1432726_at 1456059_at 1456104_at	15836	-0.063	0.1405	No
65	PSMD12	1448492_a_at	16646	-0.108	0.1052	No
66	PSMC6	1417771_a_at	16707	-0.112	0.1042	No
67	PSMA6	1416506_at 1435316_at 1435317_x_at 1437144_x_at	17094	-0.142	0.0888	No
68	CDC16	1425554_a_at	17441	-0.175	0.0757	No
69	CDC25A	1417131_at 1417132_at 1445995_at	18425	-0.297	0.0354	No
70	PSMD6	1423696_a_at 1423697_at	18665	-0.331	0.0297	No
71	ORC2L	1418225_at 1418226_at 1418227_at	19158	-0.431	0.0140	No
72	PSMD4	1418874_a_at 1425859_a_at 1451725_a_at	20420	-0.832	-0.0306	No
73	RFC2	1417503_at 1457638_x_at 1457669_x_at	20627	-0.935	-0.0253	No
74	MDM2	1423605_a_at 1427718_a_at 1457929_at	20769	-1.045	-0.0153	No
75	UBE2D1	1424062_at	20848	-1.098	-0.0017	No
76	PSMC2	1426611_at 1435859_x_at 1443307_at	21028	-1.281	0.0103	No
77	MCM3	1420029_at 1426653_at	21483	-1.983	0.0207	No