Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
Upregulated in class | ATM_plus |
GeneSet | NCI_ENDOTHELINS |
Enrichment Score (ES) | -0.51711214 |
Normalized Enrichment Score (NES) | -1.6529427 |
Nominal p-value | 0.0 |
FDR q-value | 0.1519344 |
FWER p-Value | 0.92 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | IL5 | 1425546_a_at 1442049_at 1450550_at | 130 | 3.232 | 0.0274 | No | ||
2 | AKT1 | 1416657_at 1425711_a_at 1440950_at 1442759_at | 182 | 2.933 | 0.0554 | No | ||
3 | TBX21 | 1449361_at | 242 | 2.572 | 0.0793 | No | ||
4 | EIF4EBP1 | 1417562_at 1417563_at 1434976_x_at | 583 | 1.660 | 0.0809 | No | ||
5 | CALM3 | 1426710_at 1438825_at 1438826_x_at 1450864_at | 1103 | 1.061 | 0.0680 | No | ||
6 | CALM2 | 1422414_a_at 1423807_a_at | 1171 | 1.010 | 0.0754 | No | ||
7 | EIF4A1 | 1427058_at 1430980_a_at 1434985_a_at | 1229 | 0.977 | 0.0828 | No | ||
8 | COL1A2 | 1446326_at 1450857_a_at | 1635 | 0.774 | 0.0723 | No | ||
9 | CDK4 | 1422441_x_at | 1669 | 0.757 | 0.0786 | No | ||
10 | HRAS | 1422407_s_at 1424132_at | 1741 | 0.725 | 0.0828 | No | ||
11 | GNAI1 | 1427510_at 1434440_at 1454959_s_at | 1743 | 0.724 | 0.0902 | No | ||
12 | PPP5C | 1424115_at 1424116_x_at 1451242_a_at | 1770 | 0.714 | 0.0964 | No | ||
13 | SLC3A2 | 1425364_a_at | 1947 | 0.653 | 0.0951 | No | ||
14 | MAPK14 | 1416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at | 2079 | 0.612 | 0.0954 | No | ||
15 | CASP3 | 1426165_a_at 1430192_at 1449839_at | 2160 | 0.589 | 0.0978 | No | ||
16 | EIF4G1 | 1427036_a_at 1427037_at 1438686_at | 2273 | 0.561 | 0.0985 | No | ||
17 | MAPK8 | 1420931_at 1420932_at 1437045_at 1440856_at 1457936_at | 2363 | 0.538 | 0.1000 | No | ||
18 | PPP2R5D | 1450560_a_at | 2644 | 0.481 | 0.0921 | No | ||
19 | PIK3CA | 1423144_at 1429434_at 1429435_x_at 1440054_at 1453134_at 1460326_at | 2775 | 0.456 | 0.0908 | No | ||
20 | MAPK1 | 1419568_at 1426585_s_at 1442876_at 1453104_at | 3406 | 0.363 | 0.0657 | No | ||
21 | ADCY1 | 1445112_at 1445359_at 1456487_at 1457251_x_at 1457329_at | 3448 | 0.358 | 0.0675 | No | ||
22 | GNAL | 1441654_at 1442021_at 1446359_at 1446491_at | 3565 | 0.344 | 0.0657 | No | ||
23 | GNAO1 | 1421152_a_at 1448031_at 1460383_at | 3759 | 0.328 | 0.0603 | No | ||
24 | JAK2 | 1421065_at 1421066_at | 3805 | 0.324 | 0.0615 | No | ||
25 | FOSL1 | 1417487_at 1417488_at | 3849 | 0.321 | 0.0629 | No | ||
26 | PRKCE | 1437860_at 1437861_s_at 1442609_at 1444649_at 1449956_at 1452878_at | 4192 | 0.295 | 0.0502 | No | ||
27 | PRKCZ | 1418085_at 1449692_at 1454902_at | 4536 | 0.274 | 0.0373 | No | ||
28 | RPS6 | 1453466_at | 4629 | 0.270 | 0.0359 | No | ||
29 | PPARG | 1420715_a_at | 4732 | 0.265 | 0.0340 | No | ||
30 | IL4 | 1449864_at | 4912 | 0.257 | 0.0284 | No | ||
31 | BAD | 1416582_a_at 1416583_at | 4939 | 0.255 | 0.0298 | No | ||
32 | CSF2 | 1427429_at | 5226 | 0.242 | 0.0192 | No | ||
33 | RPS6KB1 | 1428849_at 1446376_at 1454956_at 1457562_at 1459951_at 1460705_at | 5573 | 0.228 | 0.0057 | No | ||
34 | TSC2 | 1452105_a_at | 5821 | 0.219 | -0.0034 | No | ||
35 | MAF | 1435828_at 1437473_at 1444073_at 1447849_s_at 1447945_at 1456060_at | 5957 | 0.213 | -0.0074 | No | ||
36 | EIF4E | 1450909_at 1457489_at 1459371_at | 6477 | 0.196 | -0.0292 | No | ||
37 | FKBP8 | 1416113_at | 6548 | 0.193 | -0.0304 | No | ||
38 | IL3 | 1450566_at | 6633 | 0.190 | -0.0323 | No | ||
39 | EDNRB | 1423594_a_at 1426314_at 1437347_at | 6879 | 0.182 | -0.0416 | No | ||
40 | YWHAB | 1420878_a_at 1420879_a_at 1420880_a_at 1436783_x_at 1438708_x_at 1455815_a_at | 6981 | 0.179 | -0.0444 | No | ||
41 | MKNK1 | 1417630_at 1417631_at 1454119_at | 7113 | 0.175 | -0.0486 | No | ||
42 | E2F1 | 1417878_at 1431875_a_at 1447840_x_at | 7608 | 0.160 | -0.0697 | No | ||
43 | GNA12 | 1421026_at 1439206_at 1450096_at 1450097_s_at 1455008_at | 7638 | 0.159 | -0.0693 | No | ||
44 | CYSLTR2 | 1421642_a_at | 7850 | 0.153 | -0.0774 | No | ||
45 | EDN3 | 1421136_at 1438696_at 1441923_s_at 1441924_x_at | 7899 | 0.152 | -0.0781 | No | ||
46 | TSC1 | 1422043_at 1439989_at 1455252_at | 7907 | 0.151 | -0.0768 | No | ||
47 | ADCY9 | 1418586_at | 8094 | 0.147 | -0.0839 | No | ||
48 | INSR | 1421380_at 1450225_at | 8400 | 0.139 | -0.0964 | No | ||
49 | EGF | 1418093_a_at | 8460 | 0.138 | -0.0977 | No | ||
50 | IFNG | 1425947_at | 8785 | 0.130 | -0.1112 | No | ||
51 | ADCY5 | 1439829_at 1443080_at 1447696_x_at 1455296_at | 8813 | 0.129 | -0.1111 | No | ||
52 | IRS1 | 1423104_at | 8941 | 0.126 | -0.1157 | No | ||
53 | GNA15 | 1421302_a_at | 8945 | 0.126 | -0.1145 | No | ||
54 | IL2RA | 1420691_at 1420692_at | 9422 | 0.113 | -0.1352 | No | ||
55 | TNF | 1419607_at | 9455 | 0.113 | -0.1355 | No | ||
56 | EDN2 | 1449161_at | 9515 | 0.112 | -0.1370 | No | ||
57 | ADCY8 | 1418754_at 1443704_at | 10074 | 0.098 | -0.1616 | No | ||
58 | GNA14 | 1420385_at 1447791_s_at 1449848_at 1458738_at | 10103 | 0.097 | -0.1619 | No | ||
59 | RAN | 1443131_at 1446819_at 1447478_at 1460551_at | 11162 | 0.073 | -0.2097 | No | ||
60 | ADCY4 | 1418098_at | 11187 | 0.072 | -0.2101 | No | ||
61 | AKAP5 | 1447301_at | 11622 | 0.062 | -0.2294 | No | ||
62 | PRKACA | 1447720_x_at 1450519_a_at | 11849 | 0.056 | -0.2392 | No | ||
63 | PTEN | 1422553_at 1441593_at 1444325_at 1450655_at 1454722_at 1455728_at 1457493_at | 12225 | 0.047 | -0.2559 | No | ||
64 | EGR4 | 1449977_at | 12527 | 0.040 | -0.2693 | No | ||
65 | POU2F1 | 1419716_a_at 1427695_a_at 1427835_at | 12594 | 0.039 | -0.2719 | No | ||
66 | PLA2G4A | 1448558_a_at | 12887 | 0.032 | -0.2850 | No | ||
67 | EGFR | 1424932_at 1432647_at 1435888_at 1451530_at 1454313_at 1457563_at 1460420_a_at | 13159 | 0.025 | -0.2972 | No | ||
68 | ADCY2 | 1455462_at | 13283 | 0.021 | -0.3026 | No | ||
69 | NUP214 | 1434351_at 1456503_at 1457815_at | 13511 | 0.015 | -0.3129 | No | ||
70 | BCAR1 | 1439388_s_at 1450622_at | 13601 | 0.012 | -0.3168 | No | ||
71 | CYSLTR1 | 1418944_at 1449282_at | 13901 | 0.004 | -0.3305 | No | ||
72 | RNF128 | 1418318_at 1449036_at | 13942 | 0.003 | -0.3323 | No | ||
73 | PLCB1 | 1421170_a_at 1425600_a_at 1425781_a_at 1425782_at 1435043_at 1447004_at | 14166 | -0.003 | -0.3425 | No | ||
74 | EDNRA | 1433525_at 1440093_at 1451691_at 1460513_a_at | 14216 | -0.005 | -0.3447 | No | ||
75 | PTPN1 | 1417068_a_at 1438670_at | 14331 | -0.008 | -0.3499 | No | ||
76 | JUN | 1417409_at 1448694_at | 14497 | -0.014 | -0.3573 | No | ||
77 | FKBP1A | 1416036_at 1438795_x_at 1438958_x_at 1448184_at 1456196_x_at | 14549 | -0.015 | -0.3595 | No | ||
78 | GNAZ | 1426517_at 1435268_at | 14658 | -0.019 | -0.3642 | No | ||
79 | PTPRK | 1423277_at 1423278_at 1431680_a_at 1441276_at 1441277_s_at 1441644_at 1443491_at 1443699_at 1444763_at | 14713 | -0.021 | -0.3665 | No | ||
80 | MAPK3 | 1427060_at | 14783 | -0.022 | -0.3694 | No | ||
81 | SRC | 1423240_at 1450918_s_at | 14992 | -0.030 | -0.3787 | No | ||
82 | FOXP3 | 1420765_a_at 1457082_at | 15403 | -0.045 | -0.3970 | No | ||
83 | GNA11 | 1434254_at 1449144_at | 15519 | -0.049 | -0.4018 | No | ||
84 | CALM1 | 1417365_a_at 1417366_s_at 1433592_at 1454611_a_at 1455571_x_at | 15628 | -0.053 | -0.4062 | No | ||
85 | CRK | 1416201_at 1425855_a_at 1436835_at 1448248_at 1460176_at | 15694 | -0.056 | -0.4086 | No | ||
86 | YWHAZ | 1416102_at 1416103_at 1436971_x_at 1436981_a_at 1439005_x_at 1443893_at 1448218_s_at 1448219_a_at | 15698 | -0.056 | -0.4082 | No | ||
87 | PRKAB1 | 1424119_at 1452457_a_at | 15803 | -0.061 | -0.4123 | No | ||
88 | RAF1 | 1416078_s_at 1425419_a_at | 15837 | -0.063 | -0.4132 | No | ||
89 | TRPC6 | 1449431_at | 15850 | -0.064 | -0.4131 | No | ||
90 | FASLG | 1418803_a_at 1449235_at | 15860 | -0.064 | -0.4128 | No | ||
91 | NFATC1 | 1417621_at 1425761_a_at 1428479_at 1447084_at 1447085_s_at | 15972 | -0.069 | -0.4172 | No | ||
92 | SLC9A3 | 1432771_at 1441236_at | 16022 | -0.072 | -0.4187 | No | ||
93 | XPO1 | 1418442_at 1418443_at 1448070_at | 16219 | -0.081 | -0.4269 | No | ||
94 | MAP2K1 | 1416351_at | 16232 | -0.082 | -0.4266 | No | ||
95 | ADCY3 | 1421959_s_at 1421960_at 1436928_s_at 1436929_x_at 1440405_at 1444641_at | 16281 | -0.084 | -0.4279 | No | ||
96 | NFATC2 | 1425901_at 1425990_a_at 1426031_a_at 1426032_at 1439205_at 1440426_at | 16317 | -0.086 | -0.4286 | No | ||
97 | PRKCA | 1427562_a_at 1443069_at 1445028_at 1445395_at 1446598_at 1450945_at | 16402 | -0.092 | -0.4315 | No | ||
98 | SLC9A1 | 1417397_at | 16705 | -0.112 | -0.4442 | No | ||
99 | MAPK9 | 1421876_at 1421877_at 1421878_at | 16802 | -0.119 | -0.4474 | No | ||
100 | CD40LG | 1422283_at | 17003 | -0.135 | -0.4552 | No | ||
101 | ADCY7 | 1420970_at 1450065_at 1456307_s_at | 17324 | -0.164 | -0.4682 | No | ||
102 | PRKCD | 1422847_a_at 1442256_at | 17365 | -0.167 | -0.4683 | No | ||
103 | SFN | 1448612_at | 17471 | -0.178 | -0.4713 | No | ||
104 | YWHAE | 1426384_a_at 1426385_x_at 1435702_s_at 1438839_a_at 1440841_at 1457173_at | 17505 | -0.181 | -0.4710 | No | ||
105 | COL3A1 | 1427883_a_at 1427884_at 1442977_at | 17798 | -0.212 | -0.4822 | No | ||
106 | PRKCH | 1422079_at 1434248_at | 17855 | -0.218 | -0.4825 | No | ||
107 | MAP3K8 | 1419208_at | 18259 | -0.276 | -0.4981 | No | ||
108 | RHEB | 1416636_at | 18445 | -0.300 | -0.5035 | No | ||
109 | YWHAQ | 1420828_s_at 1420829_a_at 1420830_x_at 1432842_s_at 1437608_x_at 1454378_at 1460590_s_at 1460621_x_at | 18537 | -0.311 | -0.5045 | No | ||
110 | CBLB | 1437304_at 1455082_at 1458469_at | 18786 | -0.353 | -0.5122 | No | ||
111 | EDN1 | 1451924_a_at | 18813 | -0.357 | -0.5097 | No | ||
112 | ITCH | 1415769_at 1431316_at 1459332_at | 18975 | -0.390 | -0.5131 | Yes | ||
113 | GRB2 | 1418508_a_at 1449111_a_at | 18989 | -0.393 | -0.5096 | Yes | ||
114 | YWHAH | 1416004_at | 19020 | -0.399 | -0.5069 | Yes | ||
115 | GNAQ | 1428938_at 1428939_s_at 1428940_at 1429559_at 1446688_at 1447593_x_at 1450115_at 1455729_at 1458159_at | 19069 | -0.409 | -0.5048 | Yes | ||
116 | IRF4 | 1421173_at 1421174_at | 19146 | -0.427 | -0.5039 | Yes | ||
117 | SOS1 | 1421884_at 1421885_at 1421886_at | 19240 | -0.448 | -0.5036 | Yes | ||
118 | KPNB1 | 1416925_at 1434357_a_at 1448526_at 1451967_x_at | 19279 | -0.456 | -0.5006 | Yes | ||
119 | PLCB2 | 1452481_at | 19419 | -0.489 | -0.5019 | Yes | ||
120 | CTLA4 | 1419334_at | 19438 | -0.493 | -0.4976 | Yes | ||
121 | MEF2D | 1421388_at 1434487_at 1436642_x_at 1437300_at 1458901_at | 19516 | -0.517 | -0.4958 | Yes | ||
122 | PIK3R1 | 1425514_at 1425515_at 1438682_at 1444591_at 1451737_at | 19644 | -0.549 | -0.4960 | Yes | ||
123 | CSNK1A1 | 1424827_a_at 1428537_at 1430529_at 1451497_at 1456216_at | 19715 | -0.569 | -0.4933 | Yes | ||
124 | GNAI3 | 1428645_at 1437225_x_at | 19794 | -0.592 | -0.4908 | Yes | ||
125 | YWHAG | 1420816_at 1420817_at 1450012_x_at 1459693_x_at | 19896 | -0.621 | -0.4890 | Yes | ||
126 | PIM1 | 1423006_at 1435458_at | 19899 | -0.622 | -0.4827 | Yes | ||
127 | PTGS2 | 1417262_at 1417263_at | 20129 | -0.707 | -0.4859 | Yes | ||
128 | GNAI2 | 1419449_a_at 1435652_a_at | 20160 | -0.718 | -0.4798 | Yes | ||
129 | ADCY6 | 1418128_at | 20630 | -0.938 | -0.4916 | Yes | ||
130 | FOS | 1423100_at | 20795 | -1.059 | -0.4882 | Yes | ||
131 | JUNB | 1415899_at | 20884 | -1.130 | -0.4806 | Yes | ||
132 | BCL2 | 1422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at | 20911 | -1.157 | -0.4698 | Yes | ||
133 | CSNK2A1 | 1419034_at 1419035_s_at 1419036_at 1419037_at 1419038_a_at 1453427_at | 21003 | -1.246 | -0.4611 | Yes | ||
134 | MAP3K1 | 1424850_at | 21036 | -1.286 | -0.4493 | Yes | ||
135 | EP300 | 1434765_at | 21052 | -1.301 | -0.4365 | Yes | ||
136 | GATA3 | 1448886_at | 21135 | -1.401 | -0.4258 | Yes | ||
137 | EEF2 | 1424736_at 1440784_at 1441414_at | 21216 | -1.518 | -0.4138 | Yes | ||
138 | CAMK4 | 1421941_at 1426167_a_at 1439843_at 1442822_at 1452572_at | 21229 | -1.528 | -0.3986 | Yes | ||
139 | FRAP1 | 1417592_at 1436267_a_at 1446185_at 1459625_at | 21257 | -1.565 | -0.3836 | Yes | ||
140 | PRKCQ | 1426044_a_at | 21352 | -1.700 | -0.3704 | Yes | ||
141 | MAP2K2 | 1415974_at 1443436_at 1460636_at | 21462 | -1.936 | -0.3554 | Yes | ||
142 | PDPK1 | 1415729_at 1416501_at 1459775_at 1459776_x_at | 21531 | -2.098 | -0.3368 | Yes | ||
143 | NFATC3 | 1419976_s_at 1452497_a_at | 21574 | -2.204 | -0.3159 | Yes | ||
144 | DGKA | 1418578_at | 21651 | -2.462 | -0.2940 | Yes | ||
145 | NR4A1 | 1416505_at | 21728 | -2.816 | -0.2683 | Yes | ||
146 | GSK3B | 1434439_at 1437001_at 1439931_at 1439949_at 1451020_at 1454958_at | 21817 | -3.254 | -0.2387 | Yes | ||
147 | CREBBP | 1434633_at 1435224_at 1436983_at 1444856_at 1457641_at 1459804_at | 21856 | -3.508 | -0.2042 | Yes | ||
148 | EGR2 | 1427682_a_at 1427683_at | 21904 | -4.293 | -0.1620 | Yes | ||
149 | EGR3 | 1421486_at 1436329_at | 21908 | -4.438 | -0.1163 | Yes | ||
150 | EGR1 | 1417065_at | 21928 | -5.313 | -0.0622 | Yes | ||
151 | PTK2B | 1434653_at 1442437_at 1442927_at | 21933 | -6.050 | 0.0001 | Yes |