Details for gene set ENDOSOME[GSEA]

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	SCID
GeneSet	ENDOSOME
Enrichment Score (ES)	-0.5608646
Normalized Enrichment Score (NES)	-1.5191603
Nominal p-value	0.016806724
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RAB21	1437741_at 1437742_at 1447497_at	367	1.708	0.0355	No
2	CTSE	1418989_at	561	1.344	0.0678	No
3	RAB22A	1424503_at 1424504_at 1451379_at 1454988_s_at	813	1.028	0.0879	No
4	CD79A	1418830_at	1274	0.702	0.0883	No
5	DNER	1423671_at 1456379_x_at	1378	0.658	0.1038	No
6	RABEPK	1433041_at 1448046_at 1451487_at 1454449_at	2269	0.409	0.0756	No
7	TM9SF2	1423295_at 1455875_x_at 1456742_x_at 1460331_at	2369	0.389	0.0830	No
8	VAMP4	1422895_at 1422896_at 1434796_at	2719	0.335	0.0773	No
9	SLC30A3	1460654_at	3629	0.238	0.0430	No
10	BACE1	1421824_at 1421825_at 1436956_at 1450384_at 1455826_a_at	3846	0.223	0.0400	No
11	STEAP2	1428636_at 1438773_at 1442359_at 1444290_at 1446071_at	4550	0.179	0.0133	No
12	FPR1	1450808_at	4848	0.165	0.0048	No
13	RAB5B	1422119_at 1437446_at	5055	0.156	0.0002	No
14	IGF2R	1424111_at 1424112_at 1440979_at 1445966_at 1457356_at	5214	0.149	-0.0025	No
15	CCR5	1422259_a_at 1422260_x_at 1424727_at	5577	0.135	-0.0149	No
16	AVPR1B	1422204_at	5585	0.135	-0.0111	No
17	FYN	1417558_at 1441647_at 1448765_at	5640	0.133	-0.0095	No
18	NF2	1421820_a_at 1427708_a_at 1450382_at 1451829_a_at	6347	0.111	-0.0384	No
19	CLN3	1417551_at 1457789_at	7205	0.087	-0.0749	No
20	PAMCI	1427942_at	7661	0.075	-0.0934	No
21	TFRC	1422966_a_at 1422967_a_at 1452661_at AFFX-TransRecMur/X57349_3_at AFFX-TransRecMur/X57349_5_at AFFX-TransRecMur/X57349_M_at	8244	0.062	-0.1181	No
22	IL15	1418219_at	8258	0.062	-0.1168	No
23	LAMP2	1416343_a_at 1416344_at 1428094_at 1434503_s_at	8978	0.045	-0.1483	No
24	SYT3	1417708_at	9090	0.042	-0.1520	No
25	AVPR1A	1418603_at 1418604_at	11159	0.001	-0.2465	No
26	TSG101	1417004_at	11605	-0.009	-0.2666	No
27	LHCGR	1450192_at	11654	-0.010	-0.2685	No
28	AVPR2	1450277_at	11883	-0.015	-0.2785	No
29	CTNS	1416274_at 1456450_at	11953	-0.016	-0.2811	No
30	ATP7A	1418774_a_at 1436921_at	11959	-0.016	-0.2809	No
31	ADRB2	1437302_at	12302	-0.023	-0.2958	No
32	RNF32	1431365_at 1432156_a_at 1453666_at	12622	-0.030	-0.3094	No
33	TOM1L1	1439337_at 1451117_a_at	13505	-0.050	-0.3482	No
34	VPS28	1448447_at	13812	-0.057	-0.3604	No
35	ATP7B	1421563_at 1446004_at 1450283_at	13920	-0.060	-0.3635	No
36	YKT6	1448464_at 1460191_at	14130	-0.065	-0.3710	No
37	LYST	1421384_at 1425973_at 1434674_at	14654	-0.079	-0.3925	No
38	MAL	1417275_at 1432558_a_at	15035	-0.089	-0.4071	No
39	LDLRAP1	1424378_at 1457162_at	15459	-0.102	-0.4234	No
40	RABEP1	1421305_x_at 1426023_a_at 1427448_at 1443856_at 1444930_at 1459494_at	16984	-0.155	-0.4883	No
41	TPT1	1416642_a_at 1416643_at	18341	-0.240	-0.5429	Yes
42	VPS4B	1417007_a_at 1457067_at 1460104_at	18390	-0.245	-0.5376	Yes
43	STS	1421500_at	18424	-0.248	-0.5315	Yes
44	EGFR	1424932_at 1432647_at 1435888_at 1451530_at 1454313_at 1457563_at 1460420_a_at	18510	-0.256	-0.5276	Yes
45	SNX17	1455955_s_at	18633	-0.268	-0.5249	Yes
46	VPS35	1415783_at 1415784_at	18800	-0.283	-0.5239	Yes
47	WDFY1	1424749_at 1435588_at 1437358_at 1447543_at 1453426_a_at	18966	-0.300	-0.5222	Yes
48	M6PRBP1	1416424_at	18971	-0.301	-0.5132	Yes
49	VAMP8	1420624_a_at	19686	-0.404	-0.5335	Yes
50	ALS2	1417783_at 1417784_at 1431608_at 1446183_at	20014	-0.472	-0.5339	Yes
51	RAB14	1415686_at 1419243_at 1419244_a_at 1419245_at 1419246_s_at 1439687_at 1441992_at	20604	-0.653	-0.5409	Yes
52	ARF6	1418822_a_at 1418823_at 1418824_at	20713	-0.708	-0.5241	Yes
53	ANKFY1	1417685_at 1443654_at	21122	-1.001	-0.5121	Yes
54	BET1L	1422980_a_at 1426372_a_at 1430549_at 1453570_x_at	21452	-1.436	-0.4832	Yes
55	STX6	1423038_at 1431646_a_at 1440585_at 1441133_at 1450844_at 1458920_at 1460004_x_at	21627	-1.836	-0.4349	Yes
56	ADRA2C	1422335_at 1435296_at 1439762_x_at 1457328_at	21700	-2.096	-0.3741	Yes
57	ANKRD27	1425112_at 1454717_at	21834	-2.927	-0.2905	Yes
58	LAMP1	1415880_a_at 1460096_at	21881	-3.769	-0.1772	Yes
59	VPS29	1417659_at 1417660_s_at 1440641_at 1455302_at	21929	-5.869	0.0003	Yes