Details for gene set ECTODERM

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	SCID
GeneSet	ECTODERM_DEVELOPMENT
Enrichment Score (ES)	-0.54988015
Normalized Enrichment Score (NES)	-1.4783242
Nominal p-value	0.015779093
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ATP2C1	1431196_at 1434386_at 1437738_at 1439215_at 1442742_at	747	1.092	0.0168	No
2	LAMB3	1417812_a_at	1934	0.487	-0.0147	No
3	COL1A1	1423669_at 1455494_at	2113	0.441	-0.0023	No
4	PLOD1	1416289_at 1445893_at	2241	0.415	0.0113	No
5	CDSN	1435191_at 1444607_at	2261	0.411	0.0296	No
6	PTHLH	1422324_a_at 1427527_a_at	2759	0.328	0.0222	No
7	DSP	1427610_at 1435493_at 1435494_s_at	3088	0.289	0.0206	No
8	TGFB2	1423250_a_at 1438303_at 1446141_at 1450922_a_at 1450923_at	3499	0.247	0.0134	No
9	FGF7	1422243_at 1438405_at	3564	0.243	0.0218	No
10	FABP5	1416022_at	4484	0.183	-0.0117	No
11	PPARD	1425703_at 1439797_at	4642	0.174	-0.0107	No
12	IL20	1421608_at	4785	0.168	-0.0094	No
13	ALOX12B	1418266_at	4892	0.163	-0.0066	No
14	SPINK5	1430567_at	5058	0.155	-0.0069	No
15	FST	1421365_at 1434458_at	5824	0.127	-0.0360	No
16	GLI1	1449058_at	6101	0.118	-0.0431	No
17	SPRR1A	1449133_at	6326	0.111	-0.0481	No
18	COL5A2	1422437_at 1450625_at	6850	0.096	-0.0676	No
19	GJB5	1449204_at	7225	0.086	-0.0806	No
20	COL7A1	1419613_at	7805	0.071	-0.1038	No
21	DCT	1418028_at	8348	0.059	-0.1258	No
22	PROX1	1421336_at 1437894_at 1457432_at	8878	0.047	-0.1477	No
23	PTCH2	1422655_at	9211	0.040	-0.1611	No
24	HOXB13	1419576_at	9937	0.025	-0.1931	No
25	NME2	1448808_a_at	10097	0.022	-0.1993	No
26	KLK5	1429230_at	10849	0.007	-0.2333	No
27	LAMC2	1421279_at 1452505_at	11322	-0.003	-0.2547	No
28	TGM5	1430142_at	11374	-0.004	-0.2569	No
29	LAMA3	1444860_at	11532	-0.007	-0.2637	No
30	TGM3	1421355_at 1440150_at	11699	-0.011	-0.2708	No
31	CASP14	1418748_at 1443787_x_at	11722	-0.012	-0.2713	No
32	VAX2	1445218_at 1450303_at	11889	-0.015	-0.2782	No
33	RBP2	1422846_at	13021	-0.039	-0.3280	No
34	KLK7	1423542_at	13490	-0.050	-0.3471	No
35	SPRR1B	1422672_at	13550	-0.051	-0.3474	No
36	EDA	1419597_at 1449524_at 1451877_at 1451925_at	13717	-0.055	-0.3524	No
37	CRABP2	1451191_at	13771	-0.056	-0.3522	No
38	COL17A1	1418799_a_at	13884	-0.059	-0.3546	No
39	BNC1	1424890_at	14407	-0.073	-0.3750	No
40	FOXN1	1450508_at 1456815_at	14520	-0.076	-0.3766	No
41	BTD	1417987_at	15427	-0.101	-0.4133	No
42	POU2F3	1450507_at	16023	-0.120	-0.4349	No
43	SCEL	1422837_at 1459426_at	16125	-0.123	-0.4338	No
44	ALDH3A2	1415776_at	16142	-0.123	-0.4288	No
45	WAS	1419631_at	17917	-0.209	-0.5001	No
46	ERCC3	1448497_at	17921	-0.209	-0.4905	No
47	STS	1421500_at	18424	-0.248	-0.5019	No
48	ERCC2	1460727_at	18555	-0.260	-0.4957	No
49	UGCG	1421268_at 1421269_at 1435133_at 1439863_at	18580	-0.263	-0.4845	No
50	SMURF1	1443393_at	20011	-0.472	-0.5279	Yes
51	EVPL	1419133_at	20038	-0.479	-0.5068	Yes
52	STX2	1418164_at	20054	-0.483	-0.4849	Yes
53	CTGF	1416953_at	20292	-0.550	-0.4701	Yes
54	ZBTB7B	1420663_at 1455071_at	20466	-0.605	-0.4498	Yes
55	DHCR24	1418129_at 1451895_a_at	20699	-0.699	-0.4278	Yes
56	EMP1	1416529_at 1459171_at	21618	-1.820	-0.3849	Yes
57	FLOT2	1417544_a_at 1436666_at 1438164_x_at	21750	-2.342	-0.2816	Yes
58	ATP2A2	1416551_at 1427250_at 1427251_at 1437797_at 1443551_at 1452363_a_at 1458927_at	21930	-6.219	0.0003	Yes