Details for gene set V$TFIII

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	ATM_minus
GeneSet	V$TFIII_Q6
Enrichment Score (ES)	0.4221546
Normalized Enrichment Score (NES)	1.3076203
Nominal p-value	0.02745098
FDR q-value	0.6421579
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TCF12	1421908_a_at 1427670_a_at 1438762_at 1439209_at 1439619_at 1443012_at 1444620_at 1445093_at 1445133_at 1457524_at 1458337_at	11	4.990	0.0837	Yes
2	CBX4	1419583_at 1440479_at	43	3.624	0.1434	Yes
3	XPO1	1418442_at 1418443_at 1448070_at	57	3.357	0.1995	Yes
4	MSI1	1421409_at 1444306_at	188	2.344	0.2331	Yes
5	CYGB	1423630_at	216	2.215	0.2692	Yes
6	APPBP2	1430265_at 1434039_at 1434040_at 1434041_at 1444886_at 1447855_x_at 1451251_at	395	1.666	0.2892	Yes
7	UBTF	1453097_a_at 1455490_at 1460304_a_at	483	1.482	0.3102	Yes
8	KPNB1	1416925_at 1434357_a_at 1448526_at 1451967_x_at	514	1.420	0.3328	Yes
9	LMO4	1420981_a_at 1439651_at	518	1.409	0.3564	Yes
10	NDRG2	1448154_at	559	1.345	0.3773	Yes
11	BCAT2	1425764_a_at	799	1.046	0.3840	Yes
12	BRUNOL4	1426929_at 1426930_at 1452240_at 1458475_at	855	0.994	0.3982	Yes
13	CUGBP1	1423932_at 1425932_a_at 1426407_at 1426408_at 1427413_a_at	1144	0.779	0.3982	Yes
14	PSME3	1418078_at 1418079_at 1438509_at	1235	0.725	0.4063	Yes
15	NAB2	1417930_at	1360	0.670	0.4119	Yes
16	GATA3	1448886_at	1379	0.658	0.4222	Yes
17	CORO1C	1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at	1778	0.532	0.4129	No
18	JUP	1426873_s_at	2387	0.386	0.3915	No
19	ASCL1	1437086_at 1450164_at	2445	0.377	0.3952	No
20	FZD10	1440182_at 1455689_at	2577	0.356	0.3952	No
21	BCL9L	1419180_at 1438806_at 1443700_at 1444855_at	2594	0.353	0.4004	No
22	PPIG	1434475_at 1435341_at 1436505_at	2839	0.319	0.3946	No
23	CTNNBIP1	1417567_at 1431694_a_at	3233	0.273	0.3812	No
24	UPF2	1435030_at 1445777_at	3294	0.267	0.3829	No
25	STAT3	1424272_at 1426587_a_at 1459961_a_at 1460700_at	3297	0.267	0.3873	No
26	MAF	1435828_at 1437473_at 1444073_at 1447849_s_at 1447945_at 1456060_at	3332	0.264	0.3902	No
27	ABCC6	1421212_at	4057	0.208	0.3605	No
28	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	4080	0.206	0.3630	No
29	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	4226	0.197	0.3596	No
30	ITGA3	1421997_s_at 1455158_at 1460305_at	4259	0.195	0.3615	No
31	SYT7	1423012_at 1441927_at 1446641_at 1460081_at	4373	0.189	0.3595	No
32	ADAM10	1450104_at 1460083_at	4441	0.185	0.3595	No
33	ATP1A2	1427465_at 1434893_at 1443823_s_at 1452308_a_at 1455136_at	4463	0.184	0.3616	No
34	LMNA	1421654_a_at 1425472_a_at 1426868_x_at 1452212_at 1457670_s_at	4508	0.181	0.3627	No
35	FOXB1	1420705_at	4709	0.171	0.3564	No
36	GNAS	1421740_at 1427789_s_at 1443007_at 1443375_at 1444767_at 1450186_s_at 1453413_at	4810	0.167	0.3546	No
37	NODAL	1422057_at	4887	0.163	0.3539	No
38	HFE2	1429223_a_at 1454137_s_at	4958	0.160	0.3534	No
39	NCOA6	1423374_at	4967	0.160	0.3557	No
40	RAB5B	1422119_at 1437446_at	5055	0.156	0.3543	No
41	SPRED2	1423001_at 1434403_at 1436892_at 1441415_at 1441802_at	5321	0.145	0.3446	No
42	TFB2M	1423441_at	5369	0.143	0.3449	No
43	CYFIP1	1416329_at 1445327_at 1457134_at 1457615_at	5682	0.132	0.3328	No
44	LRP3	1436083_at	5879	0.125	0.3259	No
45	SALL1	1450489_at	6246	0.113	0.3110	No
46	ADAM11	1450248_at	6282	0.112	0.3113	No
47	PAX9	1421246_at 1421247_at	6375	0.110	0.3089	No
48	MAFB	1451715_at 1451716_at	6769	0.098	0.2925	No
49	NFIX	1423493_a_at 1436363_a_at 1436364_x_at 1451443_at 1459909_at	6837	0.096	0.2911	No
50	LIN28	1437752_at	7006	0.092	0.2849	No
51	SF1	1422321_a_at 1423750_a_at 1423751_at 1459765_s_at 1459766_x_at	7034	0.091	0.2852	No
52	VPS13C	1456535_at	7258	0.085	0.2764	No
53	CNTN2	1435165_at 1435166_at 1450523_at 1456962_at	7493	0.079	0.2670	No
54	HOXD11	1450584_at	7679	0.075	0.2598	No
55	ALX3	1420555_at 1459790_x_at	7730	0.073	0.2587	No
56	FOXA2	1422833_at	7766	0.073	0.2583	No
57	KLHL1	1436465_at 1449241_at	8107	0.065	0.2438	No
58	ARHGAP5	1423194_at 1450896_at 1450897_at 1457410_at	8247	0.062	0.2385	No
59	INHA	1422728_at	8349	0.059	0.2349	No
60	MEOX1	1417595_at	9118	0.042	0.2003	No
61	FEV	1425886_at	9164	0.041	0.1989	No
62	ELAVL3	1452524_a_at	9199	0.040	0.1980	No
63	PTCH2	1422655_at	9211	0.040	0.1982	No
64	NFATC4	1423380_s_at 1432821_at 1454369_a_at	9617	0.031	0.1801	No
65	GPR81	1438411_at	9791	0.028	0.1727	No
66	UNC119	1418123_at	9866	0.026	0.1697	No
67	LRP1	1442849_at 1448655_at	9964	0.024	0.1657	No
68	HOXC10	1439798_at	10041	0.023	0.1626	No
69	FGF11	1421793_at 1439959_at	10047	0.023	0.1627	No
70	HOXC5	1439885_at 1450832_at 1456301_at	10084	0.022	0.1614	No
71	GGN	1445278_at	10291	0.018	0.1523	No
72	MRC2	1421044_at 1421045_at 1446466_at	10484	0.014	0.1437	No
73	TRIM46	1460568_at	10641	0.012	0.1367	No
74	SIX4	1425767_a_at 1427701_a_at 1439753_x_at 1456862_at	11098	0.002	0.1158	No
75	NR1H3	1450444_a_at	11272	-0.002	0.1079	No
76	PPP2R5E	1428461_at 1428462_at 1428463_a_at 1439401_x_at 1443533_at 1443949_at 1446356_at 1452788_at	11630	-0.010	0.0917	No
77	PAX1	1449359_at	11751	-0.012	0.0864	No
78	TITF1	1422346_at	11840	-0.014	0.0826	No
79	POU3F3	1422331_at 1435197_at	12053	-0.018	0.0732	No
80	EED	1448653_at	12101	-0.019	0.0713	No
81	SLC7A8	1417929_at	12144	-0.020	0.0697	No
82	ESRRG	1421747_at 1455267_at 1457896_at	12151	-0.020	0.0698	No
83	SP7	1418425_at	12280	-0.023	0.0643	No
84	FBXO36	1419305_a_at 1449418_s_at	12455	-0.027	0.0568	No
85	BMF	1422995_at 1454880_s_at 1458325_x_at	12552	-0.029	0.0529	No
86	NCDN	1416852_a_at 1416853_at	12589	-0.030	0.0517	No
87	JPH3	1418161_at 1443724_at	12754	-0.034	0.0447	No
88	FCHSD2	1434260_at 1456949_at	12864	-0.036	0.0403	No
89	NXPH3	1419710_at	12989	-0.039	0.0353	No
90	MAX	1423501_at	13084	-0.041	0.0317	No
91	PRRX1	1425526_a_at 1425527_at 1425528_at 1432129_a_at 1439774_at 1458004_at	13090	-0.041	0.0321	No
92	PCDH9	1439322_at 1442659_at 1444215_at 1444724_at 1445052_at 1445061_at 1457973_at	13253	-0.045	0.0255	No
93	RARG	1419415_a_at 1419416_a_at	13386	-0.047	0.0202	No
94	GPR120	1439489_at	13806	-0.057	0.0019	No
95	BCL11A	1419406_a_at 1426552_a_at 1446293_at 1447334_at 1447335_x_at 1453814_at 1456632_at	13829	-0.058	0.0019	No
96	NKX2-2	1421112_at	13837	-0.058	0.0026	No
97	KCNH3	1421619_at 1431690_at 1445805_x_at 1459107_at	13888	-0.059	0.0013	No
98	BAZ2A	1427209_at 1427210_at 1438192_s_at	14054	-0.063	-0.0052	No
99	CHRM1	1439611_at 1450833_at	14254	-0.068	-0.0132	No
100	RHBDL2	1442819_at	14470	-0.075	-0.0218	No
101	JAG1	1421105_at 1421106_at 1434070_at	14646	-0.079	-0.0285	No
102	NUTF2	1434367_s_at 1447440_at 1449017_at	14673	-0.080	-0.0284	No
103	PPP1R9B	1447247_at 1447486_at	14719	-0.081	-0.0291	No
104	MAP4K3	1444406_at	14818	-0.084	-0.0322	No
105	MTA2	1423165_a_at	14897	-0.086	-0.0343	No
106	SIX5	1427560_at	14962	-0.088	-0.0357	No
107	NNAT	1423506_a_at	15179	-0.094	-0.0441	No
108	FGF14	1435747_at 1447221_x_at 1447480_at 1449958_a_at 1458830_at 1459073_x_at	15505	-0.103	-0.0573	No
109	ZIC2	1421301_at	15737	-0.111	-0.0660	No
110	IL11	1449982_at	15874	-0.115	-0.0703	No
111	LMO3	1455754_at	15878	-0.115	-0.0685	No
112	KCNJ10	1419601_at	15928	-0.117	-0.0688	No
113	EDG1	1423571_at	16151	-0.124	-0.0769	No
114	RCOR2	1417302_at	17017	-0.157	-0.1139	No
115	PBX1	1430183_at 1440037_at 1440954_at 1442846_at 1449542_at 1458853_at	17029	-0.157	-0.1118	No
116	APC2	1422129_at 1435199_at 1450497_at 1455231_s_at	17508	-0.182	-0.1307	No
117	CALM2	1422414_a_at 1423807_a_at	17572	-0.187	-0.1304	No
118	SOX13	1450191_a_at	17656	-0.192	-0.1310	No
119	CCND2	1416122_at 1416123_at 1416124_at 1430127_a_at 1434745_at 1448229_s_at 1455956_x_at	17710	-0.195	-0.1301	No
120	ADIPOR2	1434329_s_at 1437864_at	17832	-0.203	-0.1322	No
121	ANP32A	1421918_at 1434555_at 1450407_a_at	17868	-0.206	-0.1304	No
122	IRS1	1423104_at	17881	-0.207	-0.1274	No
123	THRA	1426997_at 1443952_at 1454675_at	17956	-0.212	-0.1273	No
124	BAHD1	1433703_s_at	17978	-0.213	-0.1246	No
125	POU2F1	1419716_a_at 1427695_a_at 1427835_at	18058	-0.219	-0.1246	No
126	RAB35	1433922_at	18079	-0.220	-0.1218	No
127	CASKIN2	1450691_at	18287	-0.235	-0.1273	No
128	PLXNC1	1423213_at 1423214_at 1443433_at 1443434_s_at 1450905_at 1450906_at	18628	-0.267	-0.1384	No
129	PHF13	1455175_at	18766	-0.281	-0.1400	No
130	CAPN1	1417228_at 1417229_at	18878	-0.290	-0.1401	No
131	CNNM1	1420354_at 1441312_at 1445979_at	18970	-0.301	-0.1393	No
132	EMX2	1456258_at	19042	-0.309	-0.1373	No
133	HCFC1R1	1428405_at 1428406_s_at	19459	-0.369	-0.1502	No
134	LDB1	1452024_a_at	19469	-0.371	-0.1443	No
135	PAFAH1B1	1417086_at 1427703_at 1439656_at 1441404_at 1444125_at 1448578_at 1456947_at 1460199_a_at	19501	-0.374	-0.1394	No
136	WDTC1	1434560_at	19588	-0.389	-0.1368	No
137	KRTCAP2	1417058_a_at 1417059_at	19654	-0.398	-0.1331	No
138	MMD	1423488_at 1423489_at	19707	-0.407	-0.1286	No
139	PKP3	1418831_at 1418832_at	19827	-0.431	-0.1268	No
140	STRAP	1416566_at 1419913_at	19863	-0.438	-0.1210	No
141	BCL2L2	1423572_at 1430453_a_at 1430454_x_at 1451029_at	20053	-0.483	-0.1215	No
142	DGKZ	1426738_at 1452169_a_at	20152	-0.509	-0.1174	No
143	PRKCBP1	1426614_at 1429415_at 1445827_at 1456143_at 1458617_at	20457	-0.603	-0.1212	No
144	LYL1	1419120_at	20503	-0.617	-0.1129	No
145	CAPN5	1418671_at 1449165_at	20555	-0.635	-0.1045	No
146	NLGN2	1455143_at 1460013_at	20745	-0.728	-0.1009	No
147	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	20914	-0.828	-0.0946	No
148	RORC	1425792_a_at 1425793_a_at	20938	-0.843	-0.0815	No
149	MICAL2	1438726_at 1455685_at	21031	-0.912	-0.0703	No
150	PIK4CB	1439197_at	21354	-1.284	-0.0634	No
151	TGFB3	1417455_at	21503	-1.541	-0.0442	No
152	FLI1	1422024_at 1433512_at 1441584_at	21536	-1.610	-0.0185	No
153	CD44	1423760_at 1434376_at 1443265_at 1452483_a_at	21719	-2.181	0.0100	No