Dataset | Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID |
Phenotype | phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID |
Upregulated in class | SCID |
GeneSet | V$POU3F2_02 |
Enrichment Score (ES) | -0.47250524 |
Normalized Enrichment Score (NES) | -1.511117 |
Nominal p-value | 0.0020408162 |
FDR q-value | 0.34373552 |
FWER p-Value | 0.879 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | BAT2 | 1422799_at 1422800_at 1442802_x_at | 80 | 3.096 | 0.0416 | No | ||
2 | ADM | 1416077_at 1447839_x_at | 237 | 2.110 | 0.0653 | No | ||
3 | LMO4 | 1420981_a_at 1439651_at | 518 | 1.409 | 0.0730 | No | ||
4 | HDAC9 | 1421306_a_at 1434572_at | 654 | 1.203 | 0.0844 | No | ||
5 | TNNI1 | 1450813_a_at | 819 | 1.022 | 0.0918 | No | ||
6 | PDE3B | 1433694_at | 854 | 0.994 | 0.1048 | No | ||
7 | ITSN1 | 1421192_a_at 1425899_a_at 1435884_at 1435885_s_at 1440637_at 1441034_at 1442637_at 1452338_s_at 1459621_at | 901 | 0.952 | 0.1166 | No | ||
8 | SP6 | 1427786_at 1427787_at 1437788_at 1442342_at | 1148 | 0.777 | 0.1167 | No | ||
9 | BMI1 | 1417493_at 1448733_at | 1463 | 0.627 | 0.1114 | No | ||
10 | PIK3R1 | 1425514_at 1425515_at 1438682_at 1444591_at 1451737_at | 1846 | 0.510 | 0.1013 | No | ||
11 | DUSP5 | 1437199_at | 2526 | 0.364 | 0.0754 | No | ||
12 | FBXW11 | 1425461_at 1425462_at 1437468_x_at 1438336_at 1443010_at 1447294_at 1457485_at | 2605 | 0.351 | 0.0769 | No | ||
13 | ADNP | 1423069_at | 2646 | 0.346 | 0.0802 | No | ||
14 | ANKRD11 | 1435778_at 1436967_at 1437633_at 1454863_at 1456110_at 1458452_at | 2844 | 0.318 | 0.0758 | No | ||
15 | ATP6V0C | 1416392_a_at 1435732_x_at 1438925_x_at | 3013 | 0.297 | 0.0724 | No | ||
16 | MAF | 1435828_at 1437473_at 1444073_at 1447849_s_at 1447945_at 1456060_at | 3332 | 0.264 | 0.0616 | No | ||
17 | FGF7 | 1422243_at 1438405_at | 3564 | 0.243 | 0.0546 | No | ||
18 | CRYZL1 | 1430546_at 1430547_s_at 1440045_at 1442574_at 1451473_a_at | 3617 | 0.239 | 0.0557 | No | ||
19 | ATOH1 | 1449822_at | 3918 | 0.217 | 0.0451 | No | ||
20 | NXT2 | 1456599_at | 3950 | 0.215 | 0.0468 | No | ||
21 | TAPBP | 1421812_at 1450378_at | 3964 | 0.214 | 0.0493 | No | ||
22 | DGKG | 1419756_at 1431167_at 1449584_at | 4025 | 0.210 | 0.0496 | No | ||
23 | HOXB1 | 1453501_at | 4026 | 0.210 | 0.0527 | No | ||
24 | SUPT16H | 1419741_at 1449578_at 1456449_at | 4072 | 0.207 | 0.0536 | No | ||
25 | PDZRN4 | 1456512_at | 4417 | 0.186 | 0.0405 | No | ||
26 | AGTR2 | 1415832_at | 4424 | 0.186 | 0.0430 | No | ||
27 | LMNA | 1421654_a_at 1425472_a_at 1426868_x_at 1452212_at 1457670_s_at | 4508 | 0.181 | 0.0418 | No | ||
28 | XYLT2 | 1452515_a_at | 4605 | 0.176 | 0.0400 | No | ||
29 | CDH13 | 1423551_at 1431824_at 1454015_a_at 1459535_at | 4782 | 0.168 | 0.0344 | No | ||
30 | SLC24A3 | 1424308_at 1442184_at 1458900_at | 4974 | 0.159 | 0.0279 | No | ||
31 | ABL1 | 1423999_at 1441291_at 1444134_at 1445153_at | 4990 | 0.158 | 0.0295 | No | ||
32 | MITF | 1422025_at 1455214_at | 5203 | 0.150 | 0.0220 | No | ||
33 | HS6ST3 | 1421599_at | 5291 | 0.146 | 0.0201 | No | ||
34 | ZFHX1B | 1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at | 5295 | 0.146 | 0.0221 | No | ||
35 | TFB2M | 1423441_at | 5369 | 0.143 | 0.0208 | No | ||
36 | CYP4B1 | 1416194_at | 5527 | 0.137 | 0.0156 | No | ||
37 | SALL3 | 1441186_at 1452386_at | 5573 | 0.135 | 0.0155 | No | ||
38 | RRAS | 1418448_at | 5637 | 0.133 | 0.0146 | No | ||
39 | NEUROG1 | 1438551_at 1450836_at | 5719 | 0.130 | 0.0128 | No | ||
40 | COL25A1 | 1421427_at | 5726 | 0.130 | 0.0144 | No | ||
41 | TEAD3 | 1420593_a_at | 6024 | 0.121 | 0.0025 | No | ||
42 | NPTX2 | 1420720_at 1449960_at | 6234 | 0.114 | -0.0054 | No | ||
43 | ZIC4 | 1421539_at 1456417_at | 6275 | 0.113 | -0.0056 | No | ||
44 | CDC2L1 | 1418841_s_at | 6482 | 0.106 | -0.0135 | No | ||
45 | ENAM | 1421699_at | 6568 | 0.104 | -0.0159 | No | ||
46 | GPC4 | 1421088_at 1436514_at 1443620_at | 6703 | 0.100 | -0.0206 | No | ||
47 | NFIX | 1423493_a_at 1436363_a_at 1436364_x_at 1451443_at 1459909_at | 6837 | 0.096 | -0.0253 | No | ||
48 | BBX | 1422741_a_at 1425835_a_at 1430820_a_at 1458602_at | 6849 | 0.096 | -0.0244 | No | ||
49 | MYF5 | 1420757_at | 6914 | 0.094 | -0.0260 | No | ||
50 | HOXB9 | 1452317_at | 6941 | 0.093 | -0.0258 | No | ||
51 | GSH1 | 1450002_at | 7018 | 0.092 | -0.0280 | No | ||
52 | ERG | 1425370_a_at 1440244_at | 7200 | 0.087 | -0.0350 | No | ||
53 | SNCAIP | 1423499_at 1430463_a_at 1441037_at | 7373 | 0.082 | -0.0417 | No | ||
54 | IGSF4 | 1417376_a_at 1417377_at 1417378_at 1431611_a_at | 7542 | 0.078 | -0.0483 | No | ||
55 | LRFN5 | 1441502_at 1454687_at | 7544 | 0.078 | -0.0472 | No | ||
56 | IGSF4D | 1435145_at 1435146_s_at 1435147_x_at 1436743_at 1440412_at 1444664_at 1459761_x_at | 7591 | 0.077 | -0.0482 | No | ||
57 | LIPG | 1421261_at 1421262_at 1450188_s_at | 7623 | 0.076 | -0.0485 | No | ||
58 | PTEN | 1422553_at 1441593_at 1444325_at 1450655_at 1454722_at 1455728_at 1457493_at | 7628 | 0.076 | -0.0476 | No | ||
59 | HOXD11 | 1450584_at | 7679 | 0.075 | -0.0488 | No | ||
60 | PHF3 | 1420119_s_at 1428998_at 1428999_at 1429000_at 1438070_at 1442173_at 1452441_at 1456115_at | 7931 | 0.069 | -0.0593 | No | ||
61 | MAGED2 | 1426306_a_at 1459873_x_at | 8420 | 0.058 | -0.0809 | No | ||
62 | PPP2R2B | 1426621_a_at | 8730 | 0.050 | -0.0944 | No | ||
63 | HOXC6 | 1427361_at 1427362_x_at 1427454_at | 9075 | 0.043 | -0.1096 | No | ||
64 | RAB3C | 1432415_at 1432432_a_at 1449494_at | 9129 | 0.041 | -0.1114 | No | ||
65 | SEMA3A | 1420416_at 1420417_at 1449865_at | 9218 | 0.040 | -0.1149 | No | ||
66 | ISL1 | 1422720_at 1450723_at | 10204 | 0.020 | -0.1599 | No | ||
67 | IRAK1 | 1448668_a_at 1460649_at | 10222 | 0.020 | -0.1604 | No | ||
68 | PKD2L2 | 1419422_at 1449469_at | 10224 | 0.020 | -0.1601 | No | ||
69 | HOXD9 | 1419126_at | 10230 | 0.019 | -0.1601 | No | ||
70 | HIVEP3 | 1421150_at 1429134_at 1439660_at 1450132_at 1458802_at | 10423 | 0.016 | -0.1687 | No | ||
71 | CHAT | 1440070_at | 10424 | 0.015 | -0.1685 | No | ||
72 | MAL2 | 1427042_at | 10453 | 0.015 | -0.1695 | No | ||
73 | RASGEF1B | 1454742_at | 10488 | 0.014 | -0.1709 | No | ||
74 | HPCAL4 | 1433987_at | 10522 | 0.014 | -0.1722 | No | ||
75 | GPR85 | 1424896_at 1424897_at 1437618_x_at 1459795_at | 10688 | 0.010 | -0.1796 | No | ||
76 | PDGFA | 1418711_at 1449187_at | 10801 | 0.008 | -0.1847 | No | ||
77 | OTX2 | 1425926_a_at | 11024 | 0.003 | -0.1948 | No | ||
78 | MTUS1 | 1436501_at 1436502_at 1445939_at 1454824_s_at 1458834_at | 11106 | 0.002 | -0.1985 | No | ||
79 | GCM1 | 1420601_at | 11115 | 0.002 | -0.1989 | No | ||
80 | FOXP1 | 1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at | 11199 | -0.000 | -0.2027 | No | ||
81 | TBXAS1 | 1416827_at | 11328 | -0.003 | -0.2085 | No | ||
82 | ASPA | 1418472_at | 11414 | -0.005 | -0.2124 | No | ||
83 | MYT1 | 1422773_at 1439365_at | 11463 | -0.006 | -0.2145 | No | ||
84 | PHC2 | 1416048_at 1437239_x_at 1439639_at | 11494 | -0.006 | -0.2158 | No | ||
85 | SOSTDC1 | 1449340_at 1460250_at | 11513 | -0.007 | -0.2165 | No | ||
86 | CHST7 | 1449402_at | 11520 | -0.007 | -0.2167 | No | ||
87 | HOXC4 | 1422870_at | 11549 | -0.008 | -0.2178 | No | ||
88 | POU1F1 | 1422220_at | 11587 | -0.008 | -0.2194 | No | ||
89 | SIX1 | 1427277_at | 11680 | -0.010 | -0.2235 | No | ||
90 | HSD3B7 | 1416968_a_at 1442912_at | 11852 | -0.014 | -0.2312 | No | ||
91 | EMILIN3 | 1436965_at | 11867 | -0.014 | -0.2316 | No | ||
92 | SYT1 | 1421990_at 1431191_a_at 1433884_at 1438282_at 1442557_at 1457497_at | 11991 | -0.017 | -0.2370 | No | ||
93 | PAK1IP1 | 1423766_at 1430875_a_at | 12180 | -0.021 | -0.2453 | No | ||
94 | FGF20 | 1421677_at | 12189 | -0.021 | -0.2454 | No | ||
95 | DIXDC1 | 1425256_a_at 1435207_at 1443957_at 1444395_at | 12267 | -0.023 | -0.2486 | No | ||
96 | PRDX2 | 1418506_a_at 1430979_a_at | 12271 | -0.023 | -0.2484 | No | ||
97 | LGI1 | 1423183_at 1435851_at | 12402 | -0.026 | -0.2540 | No | ||
98 | PNMA1 | 1429224_at | 12458 | -0.027 | -0.2562 | No | ||
99 | SLC26A7 | 1425841_at | 12523 | -0.028 | -0.2587 | No | ||
100 | NEO1 | 1423513_at 1434931_at 1440789_at 1444295_at 1447693_s_at 1447694_x_at 1459485_at | 12594 | -0.030 | -0.2615 | No | ||
101 | SMARCA2 | 1430526_a_at 1439930_at 1452333_at | 12704 | -0.032 | -0.2660 | No | ||
102 | PRDM10 | 1441764_at 1444812_at | 12928 | -0.037 | -0.2757 | No | ||
103 | NEUROG2 | 1422839_at | 13027 | -0.040 | -0.2796 | No | ||
104 | LOX | 1416121_at 1437903_at 1448228_at | 13124 | -0.042 | -0.2835 | No | ||
105 | SFRP2 | 1448201_at | 13166 | -0.043 | -0.2847 | No | ||
106 | CABLES1 | 1439778_at 1455844_at | 13263 | -0.045 | -0.2885 | No | ||
107 | TOP1 | 1423474_at 1438495_at 1457573_at 1459672_at | 13518 | -0.050 | -0.2994 | No | ||
108 | SLC6A15 | 1426712_at | 13532 | -0.050 | -0.2993 | No | ||
109 | CSF3 | 1419427_at | 13636 | -0.053 | -0.3032 | No | ||
110 | BMP5 | 1421282_at 1421283_at 1444470_x_at 1455851_at | 14138 | -0.065 | -0.3253 | No | ||
111 | MDM1 | 1445709_at 1451053_a_at | 14349 | -0.071 | -0.3339 | No | ||
112 | GIP | 1449908_at | 14484 | -0.075 | -0.3390 | No | ||
113 | BMPR2 | 1419616_at 1434310_at 1441652_at | 14559 | -0.077 | -0.3413 | No | ||
114 | GSC | 1421412_at | 14929 | -0.087 | -0.3570 | No | ||
115 | USH3A | 1438347_at | 15052 | -0.090 | -0.3613 | No | ||
116 | PLCD4 | 1437030_at | 15095 | -0.091 | -0.3619 | No | ||
117 | HTR4 | 1427654_a_at 1439614_at 1443365_at | 15169 | -0.093 | -0.3639 | No | ||
118 | GBX2 | 1420337_at | 15303 | -0.097 | -0.3685 | No | ||
119 | MUSK | 1450511_at | 15330 | -0.098 | -0.3683 | No | ||
120 | FERD3L | 1422410_at | 15470 | -0.102 | -0.3732 | No | ||
121 | ZADH2 | 1451277_at | 15501 | -0.103 | -0.3731 | No | ||
122 | NUDT3 | 1451575_a_at | 15701 | -0.109 | -0.3806 | No | ||
123 | KCNK2 | 1445929_at 1449158_at | 15897 | -0.116 | -0.3879 | No | ||
124 | AP1S2 | 1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at | 15908 | -0.116 | -0.3867 | No | ||
125 | SLC22A17 | 1448209_a_at | 16114 | -0.123 | -0.3943 | No | ||
126 | EYA1 | 1421727_at 1443117_at 1457424_at | 16261 | -0.128 | -0.3991 | No | ||
127 | ASXL2 | 1439063_at 1444754_at 1453295_at 1458366_at 1460597_at | 16305 | -0.129 | -0.3992 | No | ||
128 | OLFML2B | 1423915_at | 16557 | -0.138 | -0.4087 | No | ||
129 | PIK3C2A | 1421023_at 1425862_a_at 1443655_s_at | 16628 | -0.141 | -0.4099 | No | ||
130 | SLC18A3 | 1422203_at | 16785 | -0.148 | -0.4149 | No | ||
131 | BRS3 | 1422265_at | 16839 | -0.150 | -0.4152 | No | ||
132 | HOXD10 | 1418606_at | 16953 | -0.154 | -0.4181 | No | ||
133 | CXXC5 | 1431469_a_at 1448960_at | 17047 | -0.158 | -0.4201 | No | ||
134 | LHX6 | 1422262_a_at 1425094_a_at | 17275 | -0.169 | -0.4280 | No | ||
135 | DPYD | 1427945_at 1427946_s_at 1443717_at | 17287 | -0.170 | -0.4261 | No | ||
136 | ACTG2 | 1422340_a_at | 17438 | -0.178 | -0.4303 | No | ||
137 | DSCR1 | 1416600_a_at 1416601_a_at | 17441 | -0.178 | -0.4278 | No | ||
138 | PANK4 | 1435004_at | 17530 | -0.183 | -0.4292 | No | ||
139 | RARB | 1454906_at | 17581 | -0.187 | -0.4288 | No | ||
140 | ANP32A | 1421918_at 1434555_at 1450407_a_at | 17868 | -0.206 | -0.4389 | No | ||
141 | POU2F1 | 1419716_a_at 1427695_a_at 1427835_at | 18058 | -0.219 | -0.4444 | No | ||
142 | FOXP2 | 1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at | 18070 | -0.220 | -0.4417 | No | ||
143 | IL1RAPL1 | 1445821_at 1458964_at | 18289 | -0.235 | -0.4483 | No | ||
144 | CXADR | 1427321_s_at 1449949_a_at 1451865_at 1452391_at 1453282_at | 18406 | -0.246 | -0.4500 | No | ||
145 | BST2 | 1424921_at | 18736 | -0.278 | -0.4611 | No | ||
146 | MAP2K5 | 1417854_at 1430180_at 1453712_a_at 1455941_s_at | 18986 | -0.303 | -0.4681 | Yes | ||
147 | PBX3 | 1421193_a_at 1440154_at 1442270_at 1447640_s_at | 19018 | -0.307 | -0.4650 | Yes | ||
148 | HOXA3 | 1427433_s_at 1441070_at 1452421_at | 19039 | -0.309 | -0.4614 | Yes | ||
149 | NRAS | 1422688_a_at 1454060_a_at | 19045 | -0.309 | -0.4571 | Yes | ||
150 | PSMA1 | 1415695_at 1436769_at 1436770_x_at 1458292_at | 19170 | -0.327 | -0.4580 | Yes | ||
151 | GTPBP1 | 1450022_at 1450023_at | 19399 | -0.360 | -0.4632 | Yes | ||
152 | STRN4 | 1426209_at | 19492 | -0.373 | -0.4620 | Yes | ||
153 | HOXA4 | 1420226_x_at 1427354_at | 19533 | -0.380 | -0.4583 | Yes | ||
154 | H3F3B | 1420376_a_at 1430357_at 1455725_a_at | 19573 | -0.386 | -0.4545 | Yes | ||
155 | TOP3B | 1438387_x_at 1448173_a_at 1456009_x_at | 19578 | -0.387 | -0.4490 | Yes | ||
156 | DCN | 1441506_at 1449368_at | 19586 | -0.388 | -0.4436 | Yes | ||
157 | SCRN1 | 1428717_at 1428718_at | 19642 | -0.397 | -0.4404 | Yes | ||
158 | UNC13D | 1428992_at | 19659 | -0.400 | -0.4352 | Yes | ||
159 | ELMO1 | 1424523_at 1446610_at 1450208_a_at | 19716 | -0.409 | -0.4318 | Yes | ||
160 | FKRP | 1436812_at 1437536_at 1438414_at | 19875 | -0.441 | -0.4327 | Yes | ||
161 | ING1 | 1416860_s_at 1433267_at 1448496_a_at 1454534_at | 19956 | -0.459 | -0.4296 | Yes | ||
162 | ESRRA | 1442864_at 1460652_at | 19972 | -0.464 | -0.4235 | Yes | ||
163 | CUTL1 | 1424667_a_at 1424668_a_at 1425611_a_at 1425612_at 1434683_at 1437686_x_at 1440465_at 1447295_at 1451435_at | 20185 | -0.518 | -0.4257 | Yes | ||
164 | LPHN1 | 1428510_at 1452812_at | 20228 | -0.531 | -0.4199 | Yes | ||
165 | PCDH8 | 1417051_at 1432491_at 1447825_x_at | 20348 | -0.564 | -0.4171 | Yes | ||
166 | SATB1 | 1416007_at 1416008_at 1439203_at 1439449_at 1443284_at 1456902_at | 20437 | -0.594 | -0.4124 | Yes | ||
167 | CHCHD7 | 1440158_x_at 1444318_at 1446844_at 1454640_at | 20620 | -0.661 | -0.4111 | Yes | ||
168 | RBPSUH | 1418114_at 1438848_at 1446436_at 1448957_at 1454896_at | 20873 | -0.801 | -0.4110 | Yes | ||
169 | MTF1 | 1418333_at 1428979_at 1429170_a_at 1440414_at 1452990_at | 20919 | -0.831 | -0.4009 | Yes | ||
170 | PLAG1 | 1421745_at 1443943_at | 20954 | -0.857 | -0.3899 | Yes | ||
171 | GDI1 | 1447613_at 1451070_at | 21007 | -0.896 | -0.3792 | Yes | ||
172 | BCOR | 1428773_s_at 1429438_at 1452910_at | 21032 | -0.912 | -0.3670 | Yes | ||
173 | ATF7IP | 1446323_at 1449192_at 1454973_at 1459096_at | 21124 | -1.003 | -0.3565 | Yes | ||
174 | BIRC4 | 1421394_a_at 1426636_a_at 1437533_at 1440351_at 1450231_a_at 1450232_at 1456088_at | 21140 | -1.024 | -0.3422 | Yes | ||
175 | HIST1H2BC | 1418072_at | 21241 | -1.124 | -0.3304 | Yes | ||
176 | GAS2 | 1429147_at 1435834_at 1438564_at 1450112_a_at | 21283 | -1.171 | -0.3151 | Yes | ||
177 | DLX1 | 1449470_at | 21371 | -1.298 | -0.3001 | Yes | ||
178 | MTMR4 | 1418150_at 1418151_at 1459874_s_at | 21407 | -1.356 | -0.2819 | Yes | ||
179 | SHH | 1427571_at 1436869_at | 21441 | -1.420 | -0.2627 | Yes | ||
180 | KRTAP6-1 | 1420751_at 1425872_at 1451859_at | 21456 | -1.447 | -0.2421 | Yes | ||
181 | ASXL1 | 1434561_at 1435077_at 1458380_at | 21529 | -1.599 | -0.2221 | Yes | ||
182 | GABRG2 | 1418177_at 1437147_at | 21581 | -1.722 | -0.1992 | Yes | ||
183 | RREB1 | 1428657_at 1434741_at 1438216_at 1442047_at 1452862_at | 21629 | -1.842 | -0.1744 | Yes | ||
184 | MEF2C | 1421027_a_at 1421028_a_at 1424852_at 1439946_at 1445420_at 1446484_at 1451506_at 1451507_at 1458551_at | 21658 | -1.921 | -0.1476 | Yes | ||
185 | ADD3 | 1423297_at 1423298_at 1426574_a_at 1447077_at 1456162_x_at | 21664 | -1.941 | -0.1195 | Yes | ||
186 | SFRS7 | 1424033_at 1424883_s_at 1436871_at | 21882 | -3.805 | -0.0738 | Yes | ||
187 | CYR61 | 1416039_x_at 1417848_at 1417849_at 1438133_a_at 1442340_x_at 1457823_at 1459462_at | 21924 | -5.210 | 0.0006 | Yes |