DatasetSet_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls
#ATM_minus_versus_SCID
Phenotypephenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in classSCID
GeneSetV$POU3F2_02
Enrichment Score (ES)-0.47250524
Normalized Enrichment Score (NES)-1.511117
Nominal p-value0.0020408162
FDR q-value0.34373552
FWER p-Value0.879
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$POU3F2_02   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1BAT21422799_at 1422800_at 1442802_x_at803.0960.0416No
2ADM1416077_at 1447839_x_at2372.1100.0653No
3LMO41420981_a_at 1439651_at5181.4090.0730No
4HDAC91421306_a_at 1434572_at6541.2030.0844No
5TNNI11450813_a_at8191.0220.0918No
6PDE3B1433694_at8540.9940.1048No
7ITSN11421192_a_at 1425899_a_at 1435884_at 1435885_s_at 1440637_at 1441034_at 1442637_at 1452338_s_at 1459621_at9010.9520.1166No
8SP61427786_at 1427787_at 1437788_at 1442342_at11480.7770.1167No
9BMI11417493_at 1448733_at14630.6270.1114No
10PIK3R11425514_at 1425515_at 1438682_at 1444591_at 1451737_at18460.5100.1013No
11DUSP51437199_at25260.3640.0754No
12FBXW111425461_at 1425462_at 1437468_x_at 1438336_at 1443010_at 1447294_at 1457485_at26050.3510.0769No
13ADNP1423069_at26460.3460.0802No
14ANKRD111435778_at 1436967_at 1437633_at 1454863_at 1456110_at 1458452_at28440.3180.0758No
15ATP6V0C1416392_a_at 1435732_x_at 1438925_x_at30130.2970.0724No
16MAF1435828_at 1437473_at 1444073_at 1447849_s_at 1447945_at 1456060_at33320.2640.0616No
17FGF71422243_at 1438405_at35640.2430.0546No
18CRYZL11430546_at 1430547_s_at 1440045_at 1442574_at 1451473_a_at36170.2390.0557No
19ATOH11449822_at39180.2170.0451No
20NXT21456599_at39500.2150.0468No
21TAPBP1421812_at 1450378_at39640.2140.0493No
22DGKG1419756_at 1431167_at 1449584_at40250.2100.0496No
23HOXB11453501_at40260.2100.0527No
24SUPT16H1419741_at 1449578_at 1456449_at40720.2070.0536No
25PDZRN41456512_at44170.1860.0405No
26AGTR21415832_at44240.1860.0430No
27LMNA1421654_a_at 1425472_a_at 1426868_x_at 1452212_at 1457670_s_at45080.1810.0418No
28XYLT21452515_a_at46050.1760.0400No
29CDH131423551_at 1431824_at 1454015_a_at 1459535_at47820.1680.0344No
30SLC24A31424308_at 1442184_at 1458900_at49740.1590.0279No
31ABL11423999_at 1441291_at 1444134_at 1445153_at49900.1580.0295No
32MITF1422025_at 1455214_at52030.1500.0220No
33HS6ST31421599_at52910.1460.0201No
34ZFHX1B1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at52950.1460.0221No
35TFB2M1423441_at53690.1430.0208No
36CYP4B11416194_at55270.1370.0156No
37SALL31441186_at 1452386_at55730.1350.0155No
38RRAS1418448_at56370.1330.0146No
39NEUROG11438551_at 1450836_at57190.1300.0128No
40COL25A11421427_at57260.1300.0144No
41TEAD31420593_a_at60240.1210.0025No
42NPTX21420720_at 1449960_at62340.114-0.0054No
43ZIC41421539_at 1456417_at62750.113-0.0056No
44CDC2L11418841_s_at64820.106-0.0135No
45ENAM1421699_at65680.104-0.0159No
46GPC41421088_at 1436514_at 1443620_at67030.100-0.0206No
47NFIX1423493_a_at 1436363_a_at 1436364_x_at 1451443_at 1459909_at68370.096-0.0253No
48BBX1422741_a_at 1425835_a_at 1430820_a_at 1458602_at68490.096-0.0244No
49MYF51420757_at69140.094-0.0260No
50HOXB91452317_at69410.093-0.0258No
51GSH11450002_at70180.092-0.0280No
52ERG1425370_a_at 1440244_at72000.087-0.0350No
53SNCAIP1423499_at 1430463_a_at 1441037_at73730.082-0.0417No
54IGSF41417376_a_at 1417377_at 1417378_at 1431611_a_at75420.078-0.0483No
55LRFN51441502_at 1454687_at75440.078-0.0472No
56IGSF4D1435145_at 1435146_s_at 1435147_x_at 1436743_at 1440412_at 1444664_at 1459761_x_at75910.077-0.0482No
57LIPG1421261_at 1421262_at 1450188_s_at76230.076-0.0485No
58PTEN1422553_at 1441593_at 1444325_at 1450655_at 1454722_at 1455728_at 1457493_at76280.076-0.0476No
59HOXD111450584_at76790.075-0.0488No
60PHF31420119_s_at 1428998_at 1428999_at 1429000_at 1438070_at 1442173_at 1452441_at 1456115_at79310.069-0.0593No
61MAGED21426306_a_at 1459873_x_at84200.058-0.0809No
62PPP2R2B1426621_a_at87300.050-0.0944No
63HOXC61427361_at 1427362_x_at 1427454_at90750.043-0.1096No
64RAB3C1432415_at 1432432_a_at 1449494_at91290.041-0.1114No
65SEMA3A1420416_at 1420417_at 1449865_at92180.040-0.1149No
66ISL11422720_at 1450723_at102040.020-0.1599No
67IRAK11448668_a_at 1460649_at102220.020-0.1604No
68PKD2L21419422_at 1449469_at102240.020-0.1601No
69HOXD91419126_at102300.019-0.1601No
70HIVEP31421150_at 1429134_at 1439660_at 1450132_at 1458802_at104230.016-0.1687No
71CHAT1440070_at104240.015-0.1685No
72MAL21427042_at104530.015-0.1695No
73RASGEF1B1454742_at104880.014-0.1709No
74HPCAL41433987_at105220.014-0.1722No
75GPR851424896_at 1424897_at 1437618_x_at 1459795_at106880.010-0.1796No
76PDGFA1418711_at 1449187_at108010.008-0.1847No
77OTX21425926_a_at110240.003-0.1948No
78MTUS11436501_at 1436502_at 1445939_at 1454824_s_at 1458834_at111060.002-0.1985No
79GCM11420601_at111150.002-0.1989No
80FOXP11421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at11199-0.000-0.2027No
81TBXAS11416827_at11328-0.003-0.2085No
82ASPA1418472_at11414-0.005-0.2124No
83MYT11422773_at 1439365_at11463-0.006-0.2145No
84PHC21416048_at 1437239_x_at 1439639_at11494-0.006-0.2158No
85SOSTDC11449340_at 1460250_at11513-0.007-0.2165No
86CHST71449402_at11520-0.007-0.2167No
87HOXC41422870_at11549-0.008-0.2178No
88POU1F11422220_at11587-0.008-0.2194No
89SIX11427277_at11680-0.010-0.2235No
90HSD3B71416968_a_at 1442912_at11852-0.014-0.2312No
91EMILIN31436965_at11867-0.014-0.2316No
92SYT11421990_at 1431191_a_at 1433884_at 1438282_at 1442557_at 1457497_at11991-0.017-0.2370No
93PAK1IP11423766_at 1430875_a_at12180-0.021-0.2453No
94FGF201421677_at12189-0.021-0.2454No
95DIXDC11425256_a_at 1435207_at 1443957_at 1444395_at12267-0.023-0.2486No
96PRDX21418506_a_at 1430979_a_at12271-0.023-0.2484No
97LGI11423183_at 1435851_at12402-0.026-0.2540No
98PNMA11429224_at12458-0.027-0.2562No
99SLC26A71425841_at12523-0.028-0.2587No
100NEO11423513_at 1434931_at 1440789_at 1444295_at 1447693_s_at 1447694_x_at 1459485_at12594-0.030-0.2615No
101SMARCA21430526_a_at 1439930_at 1452333_at12704-0.032-0.2660No
102PRDM101441764_at 1444812_at12928-0.037-0.2757No
103NEUROG21422839_at13027-0.040-0.2796No
104LOX1416121_at 1437903_at 1448228_at13124-0.042-0.2835No
105SFRP21448201_at13166-0.043-0.2847No
106CABLES11439778_at 1455844_at13263-0.045-0.2885No
107TOP11423474_at 1438495_at 1457573_at 1459672_at13518-0.050-0.2994No
108SLC6A151426712_at13532-0.050-0.2993No
109CSF31419427_at13636-0.053-0.3032No
110BMP51421282_at 1421283_at 1444470_x_at 1455851_at14138-0.065-0.3253No
111MDM11445709_at 1451053_a_at14349-0.071-0.3339No
112GIP1449908_at14484-0.075-0.3390No
113BMPR21419616_at 1434310_at 1441652_at14559-0.077-0.3413No
114GSC1421412_at14929-0.087-0.3570No
115USH3A1438347_at15052-0.090-0.3613No
116PLCD41437030_at15095-0.091-0.3619No
117HTR41427654_a_at 1439614_at 1443365_at15169-0.093-0.3639No
118GBX21420337_at15303-0.097-0.3685No
119MUSK1450511_at15330-0.098-0.3683No
120FERD3L1422410_at15470-0.102-0.3732No
121ZADH21451277_at15501-0.103-0.3731No
122NUDT31451575_a_at15701-0.109-0.3806No
123KCNK21445929_at 1449158_at15897-0.116-0.3879No
124AP1S21437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at15908-0.116-0.3867No
125SLC22A171448209_a_at16114-0.123-0.3943No
126EYA11421727_at 1443117_at 1457424_at16261-0.128-0.3991No
127ASXL21439063_at 1444754_at 1453295_at 1458366_at 1460597_at16305-0.129-0.3992No
128OLFML2B1423915_at16557-0.138-0.4087No
129PIK3C2A1421023_at 1425862_a_at 1443655_s_at16628-0.141-0.4099No
130SLC18A31422203_at16785-0.148-0.4149No
131BRS31422265_at16839-0.150-0.4152No
132HOXD101418606_at16953-0.154-0.4181No
133CXXC51431469_a_at 1448960_at17047-0.158-0.4201No
134LHX61422262_a_at 1425094_a_at17275-0.169-0.4280No
135DPYD1427945_at 1427946_s_at 1443717_at17287-0.170-0.4261No
136ACTG21422340_a_at17438-0.178-0.4303No
137DSCR11416600_a_at 1416601_a_at17441-0.178-0.4278No
138PANK41435004_at17530-0.183-0.4292No
139RARB1454906_at17581-0.187-0.4288No
140ANP32A1421918_at 1434555_at 1450407_a_at17868-0.206-0.4389No
141POU2F11419716_a_at 1427695_a_at 1427835_at18058-0.219-0.4444No
142FOXP21422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at18070-0.220-0.4417No
143IL1RAPL11445821_at 1458964_at18289-0.235-0.4483No
144CXADR1427321_s_at 1449949_a_at 1451865_at 1452391_at 1453282_at18406-0.246-0.4500No
145BST21424921_at18736-0.278-0.4611No
146MAP2K51417854_at 1430180_at 1453712_a_at 1455941_s_at18986-0.303-0.4681Yes
147PBX31421193_a_at 1440154_at 1442270_at 1447640_s_at19018-0.307-0.4650Yes
148HOXA31427433_s_at 1441070_at 1452421_at19039-0.309-0.4614Yes
149NRAS1422688_a_at 1454060_a_at19045-0.309-0.4571Yes
150PSMA11415695_at 1436769_at 1436770_x_at 1458292_at19170-0.327-0.4580Yes
151GTPBP11450022_at 1450023_at19399-0.360-0.4632Yes
152STRN41426209_at19492-0.373-0.4620Yes
153HOXA41420226_x_at 1427354_at19533-0.380-0.4583Yes
154H3F3B1420376_a_at 1430357_at 1455725_a_at19573-0.386-0.4545Yes
155TOP3B1438387_x_at 1448173_a_at 1456009_x_at19578-0.387-0.4490Yes
156DCN1441506_at 1449368_at19586-0.388-0.4436Yes
157SCRN11428717_at 1428718_at19642-0.397-0.4404Yes
158UNC13D1428992_at19659-0.400-0.4352Yes
159ELMO11424523_at 1446610_at 1450208_a_at19716-0.409-0.4318Yes
160FKRP1436812_at 1437536_at 1438414_at19875-0.441-0.4327Yes
161ING11416860_s_at 1433267_at 1448496_a_at 1454534_at19956-0.459-0.4296Yes
162ESRRA1442864_at 1460652_at19972-0.464-0.4235Yes
163CUTL11424667_a_at 1424668_a_at 1425611_a_at 1425612_at 1434683_at 1437686_x_at 1440465_at 1447295_at 1451435_at20185-0.518-0.4257Yes
164LPHN11428510_at 1452812_at20228-0.531-0.4199Yes
165PCDH81417051_at 1432491_at 1447825_x_at20348-0.564-0.4171Yes
166SATB11416007_at 1416008_at 1439203_at 1439449_at 1443284_at 1456902_at20437-0.594-0.4124Yes
167CHCHD71440158_x_at 1444318_at 1446844_at 1454640_at20620-0.661-0.4111Yes
168RBPSUH1418114_at 1438848_at 1446436_at 1448957_at 1454896_at20873-0.801-0.4110Yes
169MTF11418333_at 1428979_at 1429170_a_at 1440414_at 1452990_at20919-0.831-0.4009Yes
170PLAG11421745_at 1443943_at20954-0.857-0.3899Yes
171GDI11447613_at 1451070_at21007-0.896-0.3792Yes
172BCOR1428773_s_at 1429438_at 1452910_at21032-0.912-0.3670Yes
173ATF7IP1446323_at 1449192_at 1454973_at 1459096_at21124-1.003-0.3565Yes
174BIRC41421394_a_at 1426636_a_at 1437533_at 1440351_at 1450231_a_at 1450232_at 1456088_at21140-1.024-0.3422Yes
175HIST1H2BC1418072_at21241-1.124-0.3304Yes
176GAS21429147_at 1435834_at 1438564_at 1450112_a_at21283-1.171-0.3151Yes
177DLX11449470_at21371-1.298-0.3001Yes
178MTMR41418150_at 1418151_at 1459874_s_at21407-1.356-0.2819Yes
179SHH1427571_at 1436869_at21441-1.420-0.2627Yes
180KRTAP6-11420751_at 1425872_at 1451859_at21456-1.447-0.2421Yes
181ASXL11434561_at 1435077_at 1458380_at21529-1.599-0.2221Yes
182GABRG21418177_at 1437147_at21581-1.722-0.1992Yes
183RREB11428657_at 1434741_at 1438216_at 1442047_at 1452862_at21629-1.842-0.1744Yes
184MEF2C1421027_a_at 1421028_a_at 1424852_at 1439946_at 1445420_at 1446484_at 1451506_at 1451507_at 1458551_at21658-1.921-0.1476Yes
185ADD31423297_at 1423298_at 1426574_a_at 1447077_at 1456162_x_at21664-1.941-0.1195Yes
186SFRS71424033_at 1424883_s_at 1436871_at21882-3.805-0.0738Yes
187CYR611416039_x_at 1417848_at 1417849_at 1438133_a_at 1442340_x_at 1457823_at 1459462_at21924-5.2100.0006Yes
Table: GSEA details [plain text format]



Fig 2: V$POU3F2_02   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$POU3F2_02: Random ES distribution   
Gene set null distribution of ES for V$POU3F2_02