Details for gene set V$NKX25

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	SCID
GeneSet	V$NKX25_01
Enrichment Score (ES)	-0.50076294
Normalized Enrichment Score (NES)	-1.4774057
Nominal p-value	0.011976048
FDR q-value	0.3530976
FWER p-Value	0.945

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SLC39A6	1424674_at 1424675_at 1441949_x_at 1447893_x_at	464	1.539	0.0202	No
2	NEDD4	1421955_a_at 1444044_at 1450431_a_at 1451109_a_at	1036	0.857	0.0171	No
3	TCF4	1416723_at 1416724_x_at 1416725_at 1424089_a_at 1434148_at 1434149_at 1439336_at 1440106_at 1446386_at 1458201_at	1203	0.741	0.0295	No
4	TGIF	1422286_a_at	1210	0.737	0.0491	No
5	WNT8B	1421439_at	1312	0.684	0.0629	No
6	CUEDC1	1425920_at 1435358_at 1443455_at 1451447_at	1461	0.628	0.0730	No
7	STAG2	1421849_at 1450396_at	1687	0.557	0.0777	No
8	PPP3CC	1420743_a_at 1430025_at	2116	0.440	0.0700	No
9	PGM2L1	1438774_s_at 1452841_at 1456478_at	2175	0.429	0.0789	No
10	TPD52	1419493_a_at 1419494_a_at 1436008_at 1458668_at	2215	0.421	0.0884	No
11	PSMA3	1448442_a_at	2731	0.333	0.0738	No
12	BCL11B	1440137_at 1441762_at 1450339_a_at	2895	0.313	0.0748	No
13	CLPX	1423447_at 1439342_at	3213	0.275	0.0676	No
14	GGTL3	1451094_at	3342	0.263	0.0689	No
15	SMYD1	1421329_a_at 1427714_at 1441667_s_at 1443726_at 1443727_x_at 1450203_at	3729	0.232	0.0574	No
16	PDK2	1448825_at	3807	0.225	0.0600	No
17	MAB21L2	1418934_at	3977	0.213	0.0580	No
18	LY6G6D	1450774_at	3991	0.212	0.0631	No
19	STARD3NL	1430274_a_at	4144	0.202	0.0616	No
20	CTNNA3	1441560_at	4773	0.168	0.0373	No
21	GDF3	1449288_at 1460057_at	4999	0.158	0.0313	No
22	CACNA2D3	1419225_at	5020	0.157	0.0346	No
23	SCNN1G	1419079_at	5429	0.141	0.0197	No
24	ZIC4	1421539_at 1456417_at	6275	0.113	-0.0159	No
25	CRTAC1	1426606_at 1452936_at 1457474_at 1459858_x_at	6299	0.112	-0.0140	No
26	MYH2	1425153_at	6629	0.102	-0.0263	No
27	HOXD1	1420573_at	6847	0.096	-0.0336	No
28	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	7178	0.087	-0.0464	No
29	FGF16	1420806_at	7182	0.087	-0.0442	No
30	CFL2	1418066_at 1418067_at 1431432_at	7631	0.076	-0.0627	No
31	MYL1	1452651_a_at	7832	0.071	-0.0699	No
32	PDGFC	1419123_a_at 1449351_s_at	7914	0.069	-0.0717	No
33	KCTD4	1420537_at 1441801_at	7990	0.068	-0.0734	No
34	STC2	1419503_at 1445186_at 1449484_at	8136	0.064	-0.0783	No
35	PDZK1	1431701_a_at	8186	0.064	-0.0788	No
36	EGLN2	1416533_at	8391	0.059	-0.0866	No
37	MCF2	1419021_at	8604	0.053	-0.0948	No
38	RAB27A	1425284_a_at 1425285_a_at 1429123_at 1454438_at	9223	0.040	-0.1221	No
39	RGS1	1417601_at	9603	0.032	-0.1386	No
40	BCL2	1422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at	9673	0.030	-0.1409	No
41	NR0B2	1449854_at	9692	0.030	-0.1409	No
42	IRAK1	1448668_a_at 1460649_at	10222	0.020	-0.1646	No
43	SLC22A2	1419117_at	10345	0.017	-0.1697	No
44	LRRC4	1416097_at 1435832_at	10684	0.011	-0.1849	No
45	FGF10	1420690_at	10893	0.006	-0.1943	No
46	AQP6	1420035_at 1441978_at 1447974_s_at	11498	-0.007	-0.2218	No
47	HOXC4	1422870_at	11549	-0.008	-0.2239	No
48	ACCN2	1455328_at	11597	-0.009	-0.2258	No
49	ADAMTS5	1422561_at 1450658_at 1456404_at	11713	-0.011	-0.2307	No
50	TITF1	1422346_at	11840	-0.014	-0.2361	No
51	SDF2L1	1418206_at	11878	-0.015	-0.2374	No
52	WNT3	1450763_x_at	12376	-0.025	-0.2595	No
53	TLX1	1450526_at	12669	-0.032	-0.2720	No
54	LUC7L	1428255_at 1431181_a_at 1431664_at 1452708_a_at	12832	-0.035	-0.2785	No
55	PHOX2A	1418620_at	12922	-0.037	-0.2816	No
56	BNC2	1438861_at 1440593_at 1459132_at	13142	-0.042	-0.2905	No
57	CREB5	1440089_at 1442576_at 1457222_at	13244	-0.044	-0.2939	No
58	SMARCA1	1460292_a_at	13279	-0.045	-0.2942	No
59	CRABP2	1451191_at	13771	-0.056	-0.3152	No
60	BCL11A	1419406_a_at 1426552_a_at 1446293_at 1447334_at 1447335_x_at 1453814_at 1456632_at	13829	-0.058	-0.3163	No
61	NKX2-2	1421112_at	13837	-0.058	-0.3150	No
62	T	1419304_at	14295	-0.069	-0.3341	No
63	RGS8	1453060_at	14358	-0.071	-0.3350	No
64	EGF	1418093_a_at	14364	-0.072	-0.3333	No
65	UCP3	1420657_at 1420658_at	15147	-0.092	-0.3666	No
66	HTR4	1427654_a_at 1439614_at 1443365_at	15169	-0.093	-0.3651	No
67	KLF5	1430255_at 1451021_a_at 1451739_at	15226	-0.095	-0.3651	No
68	GPR27	1422154_at	16162	-0.124	-0.4045	No
69	TEAD1	1423434_at 1447911_at 1456717_at	16288	-0.129	-0.4068	No
70	LEMD1	1445642_at	16389	-0.132	-0.4078	No
71	JPH1	1421520_at 1438428_at	16496	-0.136	-0.4090	No
72	PCDH17	1436920_at 1446821_at 1453070_at	16660	-0.143	-0.4126	No
73	CTCF	1418330_at 1449042_at	16736	-0.146	-0.4121	No
74	HOXB4	1451761_at 1460379_at	16918	-0.152	-0.4163	No
75	GSK3B	1434439_at 1437001_at 1439931_at 1439949_at 1451020_at 1454958_at	17459	-0.179	-0.4362	No
76	LMX1A	1421554_at	17790	-0.201	-0.4459	No
77	PAX7	1444596_at 1452510_at	18308	-0.237	-0.4632	No
78	PRDM8	1431852_at 1455925_at	18365	-0.242	-0.4593	No
79	EGFR	1424932_at 1432647_at 1435888_at 1451530_at 1454313_at 1457563_at 1460420_a_at	18510	-0.256	-0.4590	No
80	STATIP1	1415774_at 1438179_s_at	18514	-0.257	-0.4522	No
81	MAP2K5	1417854_at 1430180_at 1453712_a_at 1455941_s_at	18986	-0.303	-0.4656	No
82	NRAS	1422688_a_at 1454060_a_at	19045	-0.309	-0.4599	No
83	LRRTM1	1437746_at 1452624_at 1455883_a_at	19938	-0.455	-0.4885	Yes
84	DCTN1	1422521_at 1435414_s_at	20182	-0.517	-0.4857	Yes
85	BCL9	1445859_at 1446767_at 1451574_at 1455565_at	20256	-0.540	-0.4745	Yes
86	CDC42EP3	1422642_at 1450700_at	20302	-0.553	-0.4617	Yes
87	GPM6A	1426442_at 1456741_s_at 1459303_at	20340	-0.562	-0.4482	Yes
88	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	20505	-0.618	-0.4391	Yes
89	RASL11B	1423854_a_at	21084	-0.964	-0.4396	Yes
90	DLX1	1449470_at	21371	-1.298	-0.4177	Yes
91	DDR1	1415797_at 1415798_at 1435820_x_at 1437619_x_at 1438367_x_at 1439382_x_at 1456226_x_at 1459990_at	21518	-1.579	-0.3819	Yes
92	MEF2C	1421027_a_at 1421028_a_at 1424852_at 1439946_at 1445420_at 1446484_at 1451506_at 1451507_at 1458551_at	21658	-1.921	-0.3365	Yes
93	USP32	1430403_at 1436159_at 1439857_at 1440399_at 1443689_at 1459857_at	21718	-2.179	-0.2806	Yes
94	EIF2C2	1426366_at 1438043_at	21742	-2.290	-0.2199	Yes
95	FOXO1A	1416981_at 1416982_at 1416983_s_at 1459170_at	21749	-2.340	-0.1572	Yes
96	MAP4K4	1422615_at 1440609_at 1448050_s_at 1459912_at	21811	-2.707	-0.0871	Yes
97	MBP	1419646_a_at 1425263_a_at 1425264_s_at 1433532_a_at 1436201_x_at 1451961_a_at 1454651_x_at 1456228_x_at	21867	-3.444	0.0032	Yes