Details for gene set V$HNF3

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	SCID
GeneSet	V$HNF3_Q6
Enrichment Score (ES)	-0.48710355
Normalized Enrichment Score (NES)	-1.5065957
Nominal p-value	0.004149378
FDR q-value	0.28803006
FWER p-Value	0.886

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NR4A3	1421079_at 1421080_at	108	2.785	0.0353	No
2	NFIA	1421162_a_at 1421163_a_at 1427733_a_at 1438236_at 1440660_at 1441547_at 1446742_at 1446990_at 1456087_at 1459431_at	175	2.386	0.0667	No
3	PRG1	1417426_at	226	2.160	0.0956	No
4	SPIB	1460407_at	542	1.366	0.1009	No
5	NR4A1	1416505_at	851	0.997	0.1012	No
6	BRUNOL4	1426929_at 1426930_at 1452240_at 1458475_at	855	0.994	0.1154	No
7	SYN3	1421248_at 1443006_at 1459550_at	934	0.931	0.1253	No
8	ABI1	1423177_a_at 1423178_at 1450890_a_at	940	0.924	0.1384	No
9	SLC39A8	1416832_at 1448482_at	1002	0.879	0.1483	No
10	CYP7A1	1422100_at 1438743_at	1085	0.822	0.1564	No
11	XPO4	1421054_at 1430797_at 1440663_at 1442528_at	1182	0.754	0.1629	No
12	CDKN1A	1421679_a_at 1424638_at	1506	0.614	0.1570	No
13	GFRA1	1421973_at 1439015_at 1450440_at	1968	0.480	0.1427	No
14	NR1D1	1421802_at 1426464_at	2160	0.431	0.1402	No
15	ASCL1	1437086_at 1450164_at	2445	0.377	0.1326	No
16	TIMP4	1423405_at 1450974_at	2566	0.358	0.1323	No
17	PHEX	1421979_at 1450445_at	2627	0.349	0.1346	No
18	BCL11B	1440137_at 1441762_at 1450339_a_at	2895	0.313	0.1268	No
19	SLITRK6	1437231_at	3040	0.295	0.1245	No
20	H2AFY	1424572_a_at	3045	0.294	0.1285	No
21	PURA	1420628_at 1438219_at 1449934_at 1453783_at 1456898_at	3117	0.285	0.1294	No
22	GTF2A1	1421357_at	3150	0.282	0.1320	No
23	EGR2	1427682_a_at 1427683_at	3177	0.279	0.1348	No
24	LHX9	1419324_at 1431598_a_at 1441313_x_at	3179	0.279	0.1388	No
25	CHRDL1	1421295_at 1424945_at 1434201_at 1456722_at	3275	0.269	0.1383	No
26	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	3411	0.255	0.1358	No
27	ALDH9A1	1436689_a_at 1437398_a_at	3459	0.252	0.1373	No
28	NEUROD2	1444362_at	3570	0.242	0.1358	No
29	VAX1	1421774_at	3845	0.223	0.1264	No
30	AHI1	1439083_at 1455177_at	3847	0.223	0.1296	No
31	ATOH1	1449822_at	3918	0.217	0.1295	No
32	STOML2	1448774_at	4083	0.206	0.1250	No
33	ITGA3	1421997_s_at 1455158_at 1460305_at	4259	0.195	0.1197	No
34	NRG1	1456524_at	4630	0.175	0.1053	No
35	KCNK4	1421419_at	4769	0.168	0.1014	No
36	OTP	1422285_at	4982	0.159	0.0940	No
37	BAMBI	1423753_at	5109	0.153	0.0904	No
38	SLIT3	1427086_at 1452296_at	5117	0.153	0.0923	No
39	NMNAT2	1436155_at	5314	0.145	0.0854	No
40	FABP4	1417023_a_at 1424155_at 1425809_at 1451263_a_at	5742	0.130	0.0677	No
41	HAND2	1422221_at 1436041_at 1443854_at 1446812_at	5836	0.126	0.0652	No
42	IRS4	1441429_at	5847	0.126	0.0666	No
43	FOSB	1422134_at	6059	0.119	0.0586	No
44	RBP3	1425105_at 1457855_at	6666	0.101	0.0323	No
45	ATOH8	1426418_at	6719	0.100	0.0313	No
46	BAI3	1446358_at 1454782_at	7196	0.087	0.0107	No
47	COL13A1	1422866_at	7204	0.087	0.0117	No
48	NAV3	1459440_at	7352	0.083	0.0061	No
49	UHRF2	1447217_at 1454920_at 1457070_at	7570	0.077	-0.0027	No
50	IGSF4D	1435145_at 1435146_s_at 1435147_x_at 1436743_at 1440412_at 1444664_at 1459761_x_at	7591	0.077	-0.0025	No
51	TOB1	1423176_at 1440844_at	7607	0.076	-0.0021	No
52	FOXA2	1422833_at	7766	0.073	-0.0083	No
53	MYL1	1452651_a_at	7832	0.071	-0.0103	No
54	TNMD	1417979_at	7845	0.071	-0.0098	No
55	PALMD	1417251_at	8168	0.064	-0.0237	No
56	GNAZ	1426517_at 1435268_at	8543	0.054	-0.0400	No
57	FLRT3	1429310_at 1453102_at	8602	0.053	-0.0419	No
58	SNX25	1455020_at	8861	0.047	-0.0531	No
59	ATP1B4	1422908_at	8867	0.047	-0.0526	No
60	FOXD3	1422210_at	8983	0.045	-0.0573	No
61	ITPKB	1435272_at 1441058_at	9846	0.026	-0.0964	No
62	ZHX2	1455210_at	9871	0.026	-0.0972	No
63	FBXO11	1434108_at	9949	0.024	-0.1003	No
64	NPY	1419127_at	10011	0.023	-0.1028	No
65	HOXA11	1420414_at	10190	0.020	-0.1107	No
66	DRD3	1422278_at	10241	0.019	-0.1127	No
67	TWIST1	1418733_at	10365	0.017	-0.1181	No
68	HIVEP3	1421150_at 1429134_at 1439660_at 1450132_at 1458802_at	10423	0.016	-0.1205	No
69	GNAO1	1421152_a_at 1448031_at 1460383_at	10443	0.015	-0.1211	No
70	LRRTM3	1434759_at 1434760_at 1434761_at 1440112_at 1444477_at	10581	0.013	-0.1273	No
71	FGF9	1420795_at 1438718_at 1445258_at	10941	0.005	-0.1437	No
72	OTX2	1425926_a_at	11024	0.003	-0.1474	No
73	IRX5	1421072_at	11076	0.002	-0.1497	No
74	SNAP25	1416828_at 1443398_at	11203	-0.000	-0.1555	No
75	TBXAS1	1416827_at	11328	-0.003	-0.1611	No
76	ANGPTL1	1421421_at 1421791_at 1446396_at 1455224_at	11461	-0.006	-0.1671	No
77	CLDN2	1417231_at 1417232_at	11509	-0.007	-0.1691	No
78	SOSTDC1	1449340_at 1460250_at	11513	-0.007	-0.1692	No
79	CYP26B1	1460011_at	11539	-0.007	-0.1702	No
80	KLF7	1419354_at 1419355_at 1419356_at 1449439_at 1458389_at	11710	-0.011	-0.1779	No
81	CLDN8	1449091_at	11752	-0.012	-0.1796	No
82	SMPX	1418095_at	11993	-0.017	-0.1903	No
83	C8B	1427472_a_at	12282	-0.023	-0.2032	No
84	LGI1	1423183_at 1435851_at	12402	-0.026	-0.2083	No
85	HOXB3	1427605_at 1456229_at	12556	-0.029	-0.2149	No
86	HOXA10	1431475_a_at 1446408_at	12703	-0.032	-0.2211	No
87	SMARCA2	1430526_a_at 1439930_at 1452333_at	12704	-0.032	-0.2207	No
88	LUC7L	1428255_at 1431181_a_at 1431664_at 1452708_a_at	12832	-0.035	-0.2260	No
89	BRIP1	1458427_at	12871	-0.036	-0.2272	No
90	HAPLN1	1421633_a_at 1426294_at 1426295_at 1438020_at 1445735_at 1458109_at	12874	-0.036	-0.2268	No
91	TJP1	1417749_a_at	13105	-0.041	-0.2367	No
92	PRDX5	1416381_a_at	13254	-0.045	-0.2429	No
93	GRIK2	1425790_a_at 1439286_at 1440602_at 1445090_at 1457683_at	13388	-0.047	-0.2483	No
94	SLC13A1	1430804_at 1431379_a_at	13842	-0.058	-0.2683	No
95	PACSIN3	1416995_at 1431534_at 1437834_s_at 1456191_x_at	13992	-0.062	-0.2742	No
96	BMP5	1421282_at 1421283_at 1444470_x_at 1455851_at	14138	-0.065	-0.2799	No
97	HESX1	1420604_at	14151	-0.066	-0.2795	No
98	GATA6	1425463_at 1425464_at 1443081_at	14454	-0.074	-0.2923	No
99	CRH	1457984_at	14488	-0.075	-0.2927	No
100	FOXN1	1450508_at 1456815_at	14520	-0.076	-0.2931	No
101	GCNT2	1421415_s_at 1425503_at 1430826_s_at 1437607_at 1438660_at 1450238_at 1451733_at 1453674_at	15241	-0.095	-0.3247	No
102	GOLGA1	1431120_a_at 1432054_at 1435027_at 1446087_at	15402	-0.100	-0.3306	No
103	ZADH2	1451277_at	15501	-0.103	-0.3336	No
104	PRDM1	1420425_at 1444997_at	15531	-0.104	-0.3335	No
105	EBF2	1418494_at 1446128_at 1449101_at 1449102_at	15763	-0.111	-0.3424	No
106	LMO3	1455754_at	15878	-0.115	-0.3460	No
107	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	16059	-0.121	-0.3525	No
108	TEAD1	1423434_at 1447911_at 1456717_at	16288	-0.129	-0.3611	No
109	SGK	1416041_at	16378	-0.132	-0.3633	No
110	CDH10	1425092_at 1433302_at 1446399_at 1460538_at	16582	-0.139	-0.3706	No
111	TFDP2	1435344_at 1437174_at 1443962_at 1445873_at	16609	-0.140	-0.3698	No
112	PIK3C2A	1421023_at 1425862_a_at 1443655_s_at	16628	-0.141	-0.3686	No
113	PCDH17	1436920_at 1446821_at 1453070_at	16660	-0.143	-0.3679	No
114	NDST2	1417931_at	16693	-0.144	-0.3673	No
115	PDCD4	1444171_at	17064	-0.159	-0.3820	No
116	VTN	1420484_a_at 1455098_a_at	17256	-0.168	-0.3883	No
117	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	18516	-0.257	-0.4424	No
118	PTPRG	1447906_at 1450122_at	18807	-0.284	-0.4516	No
119	NRAS	1422688_a_at 1454060_a_at	19045	-0.309	-0.4580	No
120	MAP3K13	1430137_at 1440749_at 1447699_at	19084	-0.314	-0.4552	No
121	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	19589	-0.389	-0.4727	No
122	TYRO3	1425248_a_at 1425249_a_at	19808	-0.427	-0.4766	No
123	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	19828	-0.431	-0.4712	No
124	FGF13	1418497_at 1418498_at	19833	-0.432	-0.4651	No
125	DUSP6	1415834_at	20242	-0.535	-0.4761	No
126	ID1	1425895_a_at	20482	-0.610	-0.4783	Yes
127	CHCHD7	1440158_x_at 1444318_at 1446844_at 1454640_at	20620	-0.661	-0.4750	Yes
128	ACACA	1444810_at	20664	-0.679	-0.4672	Yes
129	LCP2	1418641_at 1418642_at	20805	-0.755	-0.4627	Yes
130	ICK	1448310_at 1454243_at 1455687_at	20828	-0.770	-0.4526	Yes
131	PLAG1	1421745_at 1443943_at	20954	-0.857	-0.4459	Yes
132	POGZ	1434650_at 1454827_at 1455046_a_at 1457748_at	20998	-0.889	-0.4351	Yes
133	GABARAPL1	1416418_at 1416419_s_at 1442572_at	21161	-1.042	-0.4274	Yes
134	NEBL	1438452_at 1439897_at 1451846_at	21187	-1.068	-0.4132	Yes
135	KCTD15	1435339_at	21273	-1.161	-0.4003	Yes
136	TGFB3	1417455_at	21503	-1.541	-0.3886	Yes
137	PPP1CB	1426205_at 1431328_at 1433540_x_at 1456462_x_at	21533	-1.605	-0.3667	Yes
138	KCNQ5	1427426_at 1441071_at	21567	-1.662	-0.3442	Yes
139	RREB1	1428657_at 1434741_at 1438216_at 1442047_at 1452862_at	21629	-1.842	-0.3204	Yes
140	MEF2C	1421027_a_at 1421028_a_at 1424852_at 1439946_at 1445420_at 1446484_at 1451506_at 1451507_at 1458551_at	21658	-1.921	-0.2939	Yes
141	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	21702	-2.099	-0.2656	Yes
142	IL16	1417391_a_at 1443796_at 1447814_x_at 1448686_at	21724	-2.197	-0.2348	Yes
143	CYR61	1416039_x_at 1417848_at 1417849_at 1438133_a_at 1442340_x_at 1457823_at 1459462_at	21924	-5.210	-0.1686	Yes
144	H2AFV	1428029_a_at 1436596_at	21928	-5.485	-0.0895	Yes
145	ATP2A2	1416551_at 1427250_at 1427251_at 1437797_at 1443551_at 1452363_a_at 1458927_at	21930	-6.219	0.0003	Yes