Dataset | Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID |
Phenotype | phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID |
Upregulated in class | ATM_minus |
GeneSet | V$HEB_Q6 |
Enrichment Score (ES) | 0.41835922 |
Normalized Enrichment Score (NES) | 1.3252828 |
Nominal p-value | 0.04206501 |
FDR q-value | 0.6610562 |
FWER p-Value | 1.0 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | S100A8 | 1419394_s_at | 105 | 2.796 | 0.0301 | Yes | ||
2 | UFM1 | 1418899_at 1418900_at 1439028_at 1449263_at | 107 | 2.790 | 0.0648 | Yes | ||
3 | USP1 | 1423674_at 1423675_at 1451080_at | 124 | 2.659 | 0.0973 | Yes | ||
4 | UBE2D3 | 1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at | 153 | 2.510 | 0.1273 | Yes | ||
5 | CACNB2 | 1441521_at 1444693_at 1446632_at 1452476_at 1456401_at | 179 | 2.373 | 0.1558 | Yes | ||
6 | ELN | 1420854_at 1420855_at 1446221_at | 254 | 2.047 | 0.1780 | Yes | ||
7 | KLF13 | 1432543_a_at 1456030_at | 316 | 1.823 | 0.1979 | Yes | ||
8 | PRKAG1 | 1417690_at 1433533_x_at 1457803_at | 326 | 1.803 | 0.2200 | Yes | ||
9 | PRKCB1 | 1423478_at 1438981_at 1443144_at 1459674_at 1460419_a_at | 376 | 1.693 | 0.2389 | Yes | ||
10 | SVIL | 1427662_at 1460694_s_at 1460735_at | 394 | 1.666 | 0.2589 | Yes | ||
11 | GPD1 | 1416204_at 1439396_x_at 1448249_at 1456732_at | 408 | 1.644 | 0.2788 | Yes | ||
12 | CKM | 1417614_at | 432 | 1.596 | 0.2977 | Yes | ||
13 | UBTF | 1453097_a_at 1455490_at 1460304_a_at | 483 | 1.482 | 0.3139 | Yes | ||
14 | LPHN3 | 1427809_at 1428523_at 1439313_at 1442276_at 1445108_at 1446197_at 1446918_at 1447551_x_at 1452561_at 1452819_at 1457950_at 1458742_at 1458772_at 1459295_at 1460440_at | 517 | 1.410 | 0.3300 | Yes | ||
15 | YTHDF2 | 1451317_at 1460357_at | 694 | 1.151 | 0.3362 | Yes | ||
16 | SUV39H2 | 1422979_at 1433996_at 1436561_at | 784 | 1.059 | 0.3454 | Yes | ||
17 | ITSN1 | 1421192_a_at 1425899_a_at 1435884_at 1435885_s_at 1440637_at 1441034_at 1442637_at 1452338_s_at 1459621_at | 901 | 0.952 | 0.3519 | Yes | ||
18 | ABHD4 | 1416315_at 1439259_x_at | 919 | 0.942 | 0.3629 | Yes | ||
19 | PSCD3 | 1418758_a_at 1431707_a_at 1446268_at | 960 | 0.909 | 0.3724 | Yes | ||
20 | NTNG2 | 1432033_at 1450820_a_at | 1029 | 0.861 | 0.3800 | Yes | ||
21 | PMP22 | 1417133_at | 1083 | 0.823 | 0.3879 | Yes | ||
22 | USP2 | 1417168_a_at 1417169_at | 1199 | 0.743 | 0.3918 | Yes | ||
23 | PSME3 | 1418078_at 1418079_at 1438509_at | 1235 | 0.725 | 0.3993 | Yes | ||
24 | RASGEF1A | 1429316_at 1435218_at | 1259 | 0.709 | 0.4071 | Yes | ||
25 | GATA3 | 1448886_at | 1379 | 0.658 | 0.4098 | Yes | ||
26 | TNNT2 | 1418726_a_at 1424967_x_at 1440424_at | 1498 | 0.618 | 0.4121 | Yes | ||
27 | GPR62 | 1442138_at 1457236_at | 1528 | 0.608 | 0.4184 | Yes | ||
28 | GADD45G | 1453851_a_at | 1914 | 0.493 | 0.4068 | No | ||
29 | ACVR1 | 1416786_at 1416787_at 1448460_at 1457551_at | 1966 | 0.480 | 0.4105 | No | ||
30 | SEZ6 | 1420885_a_at 1427674_a_at 1459972_x_at | 2078 | 0.448 | 0.4110 | No | ||
31 | RPL4 | 1425183_a_at | 2122 | 0.439 | 0.4145 | No | ||
32 | ZRANB1 | 1415712_at 1427200_at 1436228_at | 2360 | 0.390 | 0.4084 | No | ||
33 | RUFY1 | 1434131_at 1447391_at 1457340_at | 2424 | 0.380 | 0.4103 | No | ||
34 | FBXL11 | 1435329_at 1443336_at 1444358_at 1455942_at 1458449_at | 2762 | 0.328 | 0.3989 | No | ||
35 | FBXO5 | 1429499_at | 3145 | 0.282 | 0.3849 | No | ||
36 | IGF1 | 1419519_at 1436497_at 1437401_at 1452014_a_at | 3229 | 0.274 | 0.3845 | No | ||
37 | MYH3 | 1427115_at | 3247 | 0.271 | 0.3871 | No | ||
38 | L1CAM | 1421958_at 1450435_at | 3251 | 0.271 | 0.3903 | No | ||
39 | SPATS1 | 1432238_at 1443710_s_at | 3269 | 0.269 | 0.3929 | No | ||
40 | NOSIP | 1418965_at 1431428_a_at | 3300 | 0.267 | 0.3948 | No | ||
41 | PLXNB3 | 1418750_at 1440813_s_at | 3306 | 0.266 | 0.3979 | No | ||
42 | SEMA7A | 1422040_at 1459903_at | 3407 | 0.256 | 0.3965 | No | ||
43 | TGFB2 | 1423250_a_at 1438303_at 1446141_at 1450922_a_at 1450923_at | 3499 | 0.247 | 0.3954 | No | ||
44 | MDK | 1416006_at | 3670 | 0.235 | 0.3905 | No | ||
45 | TRIP4 | 1422857_at 1422858_at 1450785_at | 3757 | 0.229 | 0.3895 | No | ||
46 | MACF1 | 1428847_a_at 1428848_a_at 1439582_at | 3785 | 0.227 | 0.3910 | No | ||
47 | PDK2 | 1448825_at | 3807 | 0.225 | 0.3929 | No | ||
48 | HSD11B1 | 1449038_at | 3834 | 0.223 | 0.3945 | No | ||
49 | SLC1A4 | 1423549_at 1423550_at 1456003_a_at | 3856 | 0.222 | 0.3963 | No | ||
50 | TRIM8 | 1418577_at 1427593_at 1438679_at 1460237_at | 4238 | 0.196 | 0.3812 | No | ||
51 | MOBKL2C | 1440919_at 1459919_a_at | 4447 | 0.184 | 0.3740 | No | ||
52 | CDK5R2 | 1450465_at | 4914 | 0.162 | 0.3546 | No | ||
53 | NDST4 | 1421318_at 1431452_at 1450195_at | 4915 | 0.162 | 0.3566 | No | ||
54 | PGF | 1418471_at | 4985 | 0.158 | 0.3554 | No | ||
55 | TUBA4 | 1417373_a_at 1417374_at 1417375_at | 5013 | 0.157 | 0.3561 | No | ||
56 | RNF121 | 1426503_a_at 1426504_a_at | 5115 | 0.153 | 0.3534 | No | ||
57 | TRPC4 | 1423579_a_at 1446366_at 1451033_a_at | 5129 | 0.153 | 0.3547 | No | ||
58 | ANXA8 | 1417732_at 1425789_s_at | 5154 | 0.151 | 0.3555 | No | ||
59 | ACTB | 1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at | 5219 | 0.149 | 0.3544 | No | ||
60 | DTX1 | 1425822_a_at 1458643_at | 5405 | 0.142 | 0.3477 | No | ||
61 | SUMO2 | 1415782_at | 5409 | 0.142 | 0.3493 | No | ||
62 | DVL3 | 1420457_at | 5432 | 0.141 | 0.3500 | No | ||
63 | KCNS3 | 1445519_at 1457799_at | 5502 | 0.138 | 0.3486 | No | ||
64 | RBMS3 | 1436937_at 1436938_at 1441680_at 1443204_at 1446047_at | 5669 | 0.132 | 0.3426 | No | ||
65 | XPNPEP1 | 1422443_at | 5831 | 0.127 | 0.3368 | No | ||
66 | APBA3 | 1416182_at | 5870 | 0.125 | 0.3366 | No | ||
67 | EPN3 | 1424960_at | 6074 | 0.119 | 0.3288 | No | ||
68 | SLC30A1 | 1422786_at 1436164_at | 6203 | 0.115 | 0.3243 | No | ||
69 | LMOD1 | 1427485_at | 6289 | 0.112 | 0.3218 | No | ||
70 | ANGPTL2 | 1421002_at 1431848_at | 6378 | 0.110 | 0.3191 | No | ||
71 | GNB3 | 1449159_at | 6430 | 0.108 | 0.3181 | No | ||
72 | DAAM1 | 1431035_at 1455244_at 1458662_at | 6477 | 0.106 | 0.3174 | No | ||
73 | RIN1 | 1424507_at 1437460_x_at | 6515 | 0.105 | 0.3170 | No | ||
74 | RXRG | 1418782_at | 6976 | 0.093 | 0.2970 | No | ||
75 | ALK | 1449987_at | 7039 | 0.091 | 0.2953 | No | ||
76 | BAI3 | 1446358_at 1454782_at | 7196 | 0.087 | 0.2892 | No | ||
77 | SOX5 | 1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at | 7361 | 0.083 | 0.2827 | No | ||
78 | CNTN2 | 1435165_at 1435166_at 1450523_at 1456962_at | 7493 | 0.079 | 0.2776 | No | ||
79 | GRIK3 | 1427709_at | 7525 | 0.078 | 0.2772 | No | ||
80 | PSD | 1435780_at | 7575 | 0.077 | 0.2759 | No | ||
81 | PRRG2 | 1424329_a_at 1432763_at | 7649 | 0.075 | 0.2735 | No | ||
82 | GRIN2B | 1422223_at 1431700_at | 7719 | 0.074 | 0.2712 | No | ||
83 | CADPS | 1444488_at 1445586_at 1448955_s_at 1458298_at | 7892 | 0.070 | 0.2642 | No | ||
84 | PDZK1 | 1431701_a_at | 8186 | 0.064 | 0.2515 | No | ||
85 | RASL12 | 1428067_at | 8366 | 0.059 | 0.2440 | No | ||
86 | SRPX | 1451939_a_at | 8548 | 0.054 | 0.2364 | No | ||
87 | CREB3L1 | 1419295_at | 8753 | 0.050 | 0.2276 | No | ||
88 | SMAD7 | 1423389_at 1440952_at 1443771_x_at | 8863 | 0.047 | 0.2232 | No | ||
89 | KCNJ2 | 1450503_at | 9479 | 0.034 | 0.1954 | No | ||
90 | MAPK4 | 1435367_at | 9688 | 0.030 | 0.1862 | No | ||
91 | RAI17 | 1435740_at 1441823_at 1444505_at 1455984_at 1456816_at 1459305_at | 9810 | 0.027 | 0.1810 | No | ||
92 | MYLK | 1425504_at 1425505_at 1425506_at | 9868 | 0.026 | 0.1787 | No | ||
93 | EN1 | 1418618_at | 10080 | 0.022 | 0.1693 | No | ||
94 | GAS7 | 1417859_at 1431400_a_at 1445685_at | 10146 | 0.021 | 0.1665 | No | ||
95 | ARHGEF5 | 1452304_a_at | 10160 | 0.021 | 0.1662 | No | ||
96 | ITGB1BP2 | 1423238_at | 10169 | 0.021 | 0.1661 | No | ||
97 | ADAMTS8 | 1418270_at 1444174_at | 10457 | 0.015 | 0.1531 | No | ||
98 | HMGN2 | 1433507_a_at | 10546 | 0.013 | 0.1492 | No | ||
99 | ZNF385 | 1418865_at | 10570 | 0.013 | 0.1483 | No | ||
100 | TRIM46 | 1460568_at | 10641 | 0.012 | 0.1452 | No | ||
101 | COLEC12 | 1419693_at 1446535_at | 10924 | 0.006 | 0.1323 | No | ||
102 | ERBB3 | 1434606_at 1452482_at | 10975 | 0.005 | 0.1301 | No | ||
103 | KLHL10 | 1423497_at | 11009 | 0.004 | 0.1286 | No | ||
104 | RAB3A | 1422589_at 1459980_x_at | 11047 | 0.003 | 0.1270 | No | ||
105 | DHRS3 | 1448390_a_at | 11074 | 0.002 | 0.1258 | No | ||
106 | HOXC4 | 1422870_at | 11549 | -0.008 | 0.1041 | No | ||
107 | PAX1 | 1449359_at | 11751 | -0.012 | 0.0950 | No | ||
108 | SLC1A7 | 1456971_at | 11886 | -0.015 | 0.0890 | No | ||
109 | FNDC5 | 1435115_at 1453135_at | 12201 | -0.021 | 0.0749 | No | ||
110 | TUBA1 | 1418884_x_at | 12437 | -0.026 | 0.0644 | No | ||
111 | PDGFB | 1450413_at 1450414_at | 12506 | -0.028 | 0.0616 | No | ||
112 | IMPG1 | 1425757_a_at 1425758_a_at | 12744 | -0.033 | 0.0511 | No | ||
113 | WNT2B | 1421465_at | 12760 | -0.034 | 0.0509 | No | ||
114 | MRGPRF | 1425894_at | 12842 | -0.035 | 0.0476 | No | ||
115 | EFNA1 | 1416895_at 1448510_at | 12912 | -0.037 | 0.0449 | No | ||
116 | FBS1 | 1425276_at 1451645_at | 12998 | -0.039 | 0.0415 | No | ||
117 | COL16A1 | 1427986_a_at | 13079 | -0.041 | 0.0383 | No | ||
118 | AAK1 | 1420026_at 1435038_s_at 1441782_at | 13111 | -0.042 | 0.0374 | No | ||
119 | BCL6 | 1421818_at 1450381_a_at | 13169 | -0.043 | 0.0353 | No | ||
120 | GPR1 | 1460123_at | 13395 | -0.048 | 0.0255 | No | ||
121 | THRAP1 | 1436904_at 1438725_at 1444068_at 1446840_at 1453160_at 1453161_at | 13428 | -0.048 | 0.0247 | No | ||
122 | HPCA | 1425833_a_at 1450930_at | 13847 | -0.058 | 0.0062 | No | ||
123 | RARA | 1450180_a_at | 13871 | -0.059 | 0.0059 | No | ||
124 | KCNH3 | 1421619_at 1431690_at 1445805_x_at 1459107_at | 13888 | -0.059 | 0.0059 | No | ||
125 | CATSPER2 | 1425309_at 1445264_at | 13899 | -0.060 | 0.0062 | No | ||
126 | SPOCK2 | 1435026_at 1447443_at 1450451_at 1457430_at 1458360_at | 13980 | -0.061 | 0.0033 | No | ||
127 | WNT6 | 1419708_at 1435980_x_at | 13997 | -0.062 | 0.0033 | No | ||
128 | BAZ2A | 1427209_at 1427210_at 1438192_s_at | 14054 | -0.063 | 0.0015 | No | ||
129 | GRIN2D | 1421393_at | 14655 | -0.079 | -0.0251 | No | ||
130 | NUTF2 | 1434367_s_at 1447440_at 1449017_at | 14673 | -0.080 | -0.0249 | No | ||
131 | NOL4 | 1430189_at 1441447_at 1456387_at | 14686 | -0.080 | -0.0244 | No | ||
132 | TNRC4 | 1452851_at | 14976 | -0.088 | -0.0366 | No | ||
133 | GPR37L1 | 1424146_at | 15315 | -0.098 | -0.0509 | No | ||
134 | MUSK | 1450511_at | 15330 | -0.098 | -0.0503 | No | ||
135 | NR5A1 | 1418315_at 1421730_at | 15522 | -0.103 | -0.0578 | No | ||
136 | NFE2L1 | 1416331_a_at | 15641 | -0.107 | -0.0619 | No | ||
137 | NANOS1 | 1436648_at 1455877_a_at | 15687 | -0.109 | -0.0626 | No | ||
138 | TBX6 | 1449868_at | 15787 | -0.112 | -0.0658 | No | ||
139 | MESDC1 | 1416397_at 1416398_at | 16195 | -0.125 | -0.0829 | No | ||
140 | RGS7 | 1450659_at | 16627 | -0.141 | -0.1010 | No | ||
141 | NDST2 | 1417931_at | 16693 | -0.144 | -0.1021 | No | ||
142 | HIST1H3D | 1427863_at 1453573_at | 16942 | -0.153 | -0.1116 | No | ||
143 | FMO5 | 1421709_a_at 1440899_at 1450332_s_at | 17001 | -0.156 | -0.1124 | No | ||
144 | RCOR2 | 1417302_at | 17017 | -0.157 | -0.1111 | No | ||
145 | RAB1B | 1424064_at | 17178 | -0.164 | -0.1164 | No | ||
146 | POLL | 1449352_at | 17365 | -0.174 | -0.1228 | No | ||
147 | ACTG2 | 1422340_a_at | 17438 | -0.178 | -0.1239 | No | ||
148 | CSMD3 | 1438272_at 1438572_at 1454245_at | 17489 | -0.180 | -0.1239 | No | ||
149 | TRAPPC3 | 1416771_at | 17607 | -0.189 | -0.1269 | No | ||
150 | SYT6 | 1420188_at 1426106_a_at 1449766_at 1449767_x_at | 17609 | -0.189 | -0.1246 | No | ||
151 | CCND2 | 1416122_at 1416123_at 1416124_at 1430127_a_at 1434745_at 1448229_s_at 1455956_x_at | 17710 | -0.195 | -0.1268 | No | ||
152 | MKNK2 | 1418300_a_at 1449029_at | 17912 | -0.209 | -0.1334 | No | ||
153 | ARHGEF2 | 1421042_at 1421043_s_at 1427646_a_at | 18516 | -0.257 | -0.1579 | No | ||
154 | RNF111 | 1423304_a_at | 18551 | -0.260 | -0.1562 | No | ||
155 | MRPL54 | 1448699_at 1456788_at 1457378_at | 18771 | -0.281 | -0.1628 | No | ||
156 | FBXL20 | 1442464_at 1445575_at 1452826_s_at 1456378_s_at | 18946 | -0.297 | -0.1671 | No | ||
157 | HOXA3 | 1427433_s_at 1441070_at 1452421_at | 19039 | -0.309 | -0.1675 | No | ||
158 | PPP2R3A | 1455198_a_at | 19262 | -0.341 | -0.1734 | No | ||
159 | TMOD4 | 1449969_at | 19509 | -0.375 | -0.1800 | No | ||
160 | TLE3 | 1419654_at 1419655_at 1449554_at 1458512_at | 19828 | -0.431 | -0.1893 | No | ||
161 | SH3BP1 | 1460222_at | 19894 | -0.446 | -0.1867 | No | ||
162 | SYTL2 | 1421594_a_at 1456593_at | 19922 | -0.451 | -0.1823 | No | ||
163 | GFI1 | 1417679_at | 19954 | -0.459 | -0.1780 | No | ||
164 | HOOK1 | 1438018_at 1439173_at | 19987 | -0.465 | -0.1737 | No | ||
165 | MEN1 | 1416347_at 1416348_at 1443826_x_at | 20035 | -0.478 | -0.1699 | No | ||
166 | BCL2L2 | 1423572_at 1430453_a_at 1430454_x_at 1451029_at | 20053 | -0.483 | -0.1646 | No | ||
167 | SORBS1 | 1417358_s_at 1425826_a_at 1428471_at 1436737_a_at 1440311_at 1442401_at 1443983_at 1455967_at | 20179 | -0.516 | -0.1639 | No | ||
168 | MYO18A | 1451422_at | 20312 | -0.555 | -0.1630 | No | ||
169 | CTXN1 | 1435083_at | 20495 | -0.616 | -0.1637 | No | ||
170 | RTKN | 1425601_a_at | 20876 | -0.802 | -0.1712 | No | ||
171 | RORC | 1425792_a_at 1425793_a_at | 20938 | -0.843 | -0.1635 | No | ||
172 | CACNB3 | 1448656_at | 21008 | -0.896 | -0.1555 | No | ||
173 | SRP54 | 1430476_at 1441233_at 1441480_at | 21190 | -1.071 | -0.1504 | No | ||
174 | KCNH2 | 1449544_a_at | 21329 | -1.249 | -0.1412 | No | ||
175 | VEGF | 1420909_at 1451959_a_at | 21376 | -1.301 | -0.1270 | No | ||
176 | TGFB3 | 1417455_at | 21503 | -1.541 | -0.1136 | No | ||
177 | KCNQ5 | 1427426_at 1441071_at | 21567 | -1.662 | -0.0957 | No | ||
178 | TRAF4 | 1416571_at 1460642_at | 21617 | -1.814 | -0.0754 | No | ||
179 | BRD4 | 1424922_a_at 1440078_at 1450711_at 1451870_a_at 1458708_at | 21833 | -2.916 | -0.0488 | No | ||
180 | RTN3 | 1418101_a_at 1425539_a_at 1442365_at 1443220_at | 21901 | -4.288 | 0.0016 | No |