Details for gene set V$GATA4

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	SCID
GeneSet	V$GATA4_Q3
Enrichment Score (ES)	-0.46217468
Normalized Enrichment Score (NES)	-1.4621063
Nominal p-value	0.0039525693
FDR q-value	0.32624257
FWER p-Value	0.968

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PRKAG1	1417690_at 1433533_x_at 1457803_at	326	1.803	0.0082	No
2	SSBP3	1425940_a_at 1427917_s_at 1439136_at 1443554_at 1457560_at 1458749_at	335	1.774	0.0306	No
3	JARID2	1422698_s_at 1446082_at 1450710_at 1456661_at	405	1.648	0.0486	No
4	PDE4D	1443289_at 1458212_at 1459289_at 1459311_at	472	1.517	0.0650	No
5	ELAVL2	1421881_a_at 1421882_a_at 1421883_at 1433052_at	474	1.509	0.0843	No
6	YWHAG	1420816_at 1420817_at 1450012_x_at 1459693_x_at	589	1.289	0.0956	No
7	NSBP1	1418152_at	824	1.015	0.0979	No
8	BRUNOL4	1426929_at 1426930_at 1452240_at 1458475_at	855	0.994	0.1093	No
9	AMD1	1448484_at	858	0.990	0.1219	No
10	TRPC5	1422048_at 1442589_at 1459367_at	881	0.970	0.1334	No
11	SMARCE1	1422675_at 1422676_at 1430822_at	1087	0.820	0.1345	No
12	SP6	1427786_at 1427787_at 1437788_at 1442342_at	1148	0.777	0.1417	No
13	ECT2	1419513_a_at	1183	0.753	0.1498	No
14	HHIP	1421426_at 1437933_at 1438083_at 1455277_at	1289	0.695	0.1539	No
15	CBL	1434829_at 1446608_at 1450457_at 1455886_at	1403	0.646	0.1570	No
16	STAG2	1421849_at 1450396_at	1687	0.557	0.1512	No
17	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	1810	0.520	0.1522	No
18	E2F3	1427462_at 1434564_at	1874	0.502	0.1558	No
19	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	1999	0.471	0.1561	No
20	SLC35A1	1417538_at 1417539_at	2015	0.465	0.1614	No
21	HSPB2	1429888_a_at	2084	0.447	0.1640	No
22	CREB3	1419979_s_at 1424740_at 1424741_s_at	2227	0.417	0.1628	No
23	MRPS18B	1451164_a_at	2310	0.401	0.1642	No
24	TNFRSF19	1415921_a_at 1425212_a_at 1427600_at 1445949_at 1448147_at	2395	0.384	0.1653	No
25	PURA	1420628_at 1438219_at 1449934_at 1453783_at 1456898_at	3117	0.285	0.1358	No
26	GTF2A1	1421357_at	3150	0.282	0.1380	No
27	KCNQ4	1435721_at 1442909_at	3228	0.274	0.1380	No
28	POU4F2	1437588_at	3256	0.271	0.1402	No
29	CNR1	1419425_at 1434172_at	3383	0.259	0.1377	No
30	EGFL7	1421335_a_at 1435823_x_at 1451427_a_at 1451428_x_at	3473	0.250	0.1369	No
31	HOXA7	1449499_at	3696	0.234	0.1297	No
32	SLC16A6	1417884_at	3971	0.213	0.1198	No
33	MYB	1421317_x_at 1422734_a_at 1450194_a_at	4414	0.187	0.1019	No
34	ACTN1	1427385_s_at 1428585_at 1452415_at	4431	0.186	0.1035	No
35	ZFHX1B	1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at	5295	0.146	0.0658	No
36	PHF15	1430081_at 1455345_at	5413	0.142	0.0622	No
37	POFUT1	1443881_at 1450137_at 1456323_at	5468	0.140	0.0615	No
38	BLR1	1422003_at	5633	0.133	0.0557	No
39	CRYAB	1416455_a_at 1434369_a_at 1435837_at	5714	0.131	0.0537	No
40	FST	1421365_at 1434458_at	5824	0.127	0.0503	No
41	ATP12A	1449475_at	5890	0.124	0.0489	No
42	ZIC4	1421539_at 1456417_at	6275	0.113	0.0327	No
43	CTNND1	1422450_at 1437448_s_at 1445830_at	6644	0.102	0.0171	No
44	AKAP6	1440859_at 1444357_at	6861	0.096	0.0084	No
45	PPP1R3D	1452922_at	6978	0.092	0.0043	No
46	SF1	1422321_a_at 1423750_a_at 1423751_at 1459765_s_at 1459766_x_at	7034	0.091	0.0029	No
47	ALK	1449987_at	7039	0.091	0.0039	No
48	PLEKHK1	1418108_at	7174	0.087	-0.0011	No
49	FGF16	1420806_at	7182	0.087	-0.0003	No
50	LRRTM4	1437214_at 1455937_at	7231	0.086	-0.0014	No
51	PCYT1B	1436124_at 1437648_at	7360	0.083	-0.0062	No
52	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	7361	0.083	-0.0052	No
53	SLC8A3	1440962_at 1450311_at	7523	0.078	-0.0116	No
54	ERF	1422114_at 1435561_at	7538	0.078	-0.0112	No
55	TOB1	1423176_at 1440844_at	7607	0.076	-0.0134	No
56	EVX1	1421627_at	7968	0.068	-0.0290	No
57	LIF	1421206_at 1421207_at 1450160_at	8300	0.061	-0.0435	No
58	CPEB4	1420617_at 1420618_at 1449931_at	8638	0.052	-0.0583	No
59	FIGF	1449528_at	8810	0.048	-0.0655	No
60	CXCL5	1419728_at	8852	0.047	-0.0668	No
61	FOXD3	1422210_at	8983	0.045	-0.0722	No
62	DGKA	1418578_at	9142	0.041	-0.0789	No
63	SEMA3A	1420416_at 1420417_at 1449865_at	9218	0.040	-0.0818	No
64	FGF23	1422176_at	9574	0.032	-0.0977	No
65	RGS1	1417601_at	9603	0.032	-0.0986	No
66	SCUBE1	1449850_at	10481	0.014	-0.1387	No
67	LRRTM3	1434759_at 1434760_at 1434761_at 1440112_at 1444477_at	10581	0.013	-0.1431	No
68	OTX2	1425926_a_at	11024	0.003	-0.1634	No
69	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	11028	0.003	-0.1635	No
70	SLCO5A1	1439588_at 1440874_at	11305	-0.003	-0.1761	No
71	GPC6	1419688_at 1419689_at 1428774_at 1437417_s_at 1440634_at 1441438_at 1443201_at 1445982_at	11321	-0.003	-0.1768	No
72	XLKD1	1429379_at 1453128_at	11425	-0.005	-0.1815	No
73	PPP2R5C	1425542_a_at 1425725_s_at 1425726_x_at 1427003_at 1434205_at 1434206_s_at 1444828_at	11482	-0.006	-0.1840	No
74	WNT16	1422941_at	11484	-0.006	-0.1839	No
75	SOSTDC1	1449340_at 1460250_at	11513	-0.007	-0.1851	No
76	HOXC4	1422870_at	11549	-0.008	-0.1866	No
77	BMP4	1422912_at	11738	-0.012	-0.1951	No
78	HOXD3	1421537_at 1437664_at	11834	-0.014	-0.1993	No
79	TITF1	1422346_at	11840	-0.014	-0.1994	No
80	EGR3	1421486_at 1436329_at	11858	-0.014	-0.2000	No
81	ETS1	1422027_a_at 1422028_a_at 1426725_s_at 1452163_at	12009	-0.017	-0.2066	No
82	ESRRG	1421747_at 1455267_at 1457896_at	12151	-0.020	-0.2128	No
83	PNMA1	1429224_at	12458	-0.027	-0.2266	No
84	ATP2B4	1445701_at	12532	-0.028	-0.2296	No
85	NPPB	1450791_at	12548	-0.029	-0.2299	No
86	POU6F2	1458473_at	12557	-0.029	-0.2299	No
87	SOX2	1416967_at	12580	-0.029	-0.2305	No
88	SCN3A	1421705_at 1439204_at	12837	-0.035	-0.2418	No
89	PIM2	1417216_at	12962	-0.038	-0.2470	No
90	OVOL1	1419051_at 1419052_at	12984	-0.039	-0.2475	No
91	NEUROG2	1422839_at	13027	-0.040	-0.2489	No
92	BNC2	1438861_at 1440593_at 1459132_at	13142	-0.042	-0.2536	No
93	BCL6	1421818_at 1450381_a_at	13169	-0.043	-0.2543	No
94	VPS11	1428109_at 1428110_x_at 1441922_x_at 1452489_at	13225	-0.044	-0.2562	No
95	BAI2	1435558_at	13286	-0.045	-0.2584	No
96	RHOG	1422572_at	13658	-0.054	-0.2748	No
97	LHX4	1421483_at	13851	-0.058	-0.2828	No
98	PI15	1421403_at 1446791_at	13953	-0.061	-0.2867	No
99	GPHA2	1421497_at	14233	-0.068	-0.2986	No
100	CHRM1	1439611_at 1450833_at	14254	-0.068	-0.2987	No
101	LIFR	1425107_a_at 1450207_at	14334	-0.071	-0.3014	No
102	PPARGC1A	1434099_at 1434100_x_at 1437751_at 1456395_at 1460336_at	14560	-0.077	-0.3107	No
103	LMO2	1454086_a_at	14675	-0.080	-0.3150	No
104	UBE2D1	1424062_at	14779	-0.083	-0.3186	No
105	ZNF462	1439106_at 1456789_at	14804	-0.084	-0.3187	No
106	DLL4	1421826_at 1421827_at	15067	-0.090	-0.3295	No
107	NNAT	1423506_a_at	15179	-0.094	-0.3334	No
108	ATP2B3	1442645_at 1445679_at	15589	-0.106	-0.3509	No
109	NOS1	1422949_at 1438483_at 1458626_at	15875	-0.115	-0.3625	No
110	LMO3	1455754_at	15878	-0.115	-0.3611	No
111	CARF	1425313_at	16200	-0.125	-0.3742	No
112	HOXB2	1444204_at 1449397_at	16240	-0.127	-0.3744	No
113	LBX1	1422323_a_at 1427400_at	16328	-0.130	-0.3767	No
114	LENG9	1440190_at 1440191_s_at 1455497_at	16472	-0.135	-0.3816	No
115	VGF	1436094_at	16520	-0.137	-0.3820	No
116	TFDP2	1435344_at 1437174_at 1443962_at 1445873_at	16609	-0.140	-0.3842	No
117	MID2	1422216_at 1450537_at	16643	-0.142	-0.3839	No
118	IL10	1450330_at	16740	-0.146	-0.3864	No
119	ETFB	1428181_at	16900	-0.152	-0.3918	No
120	CXXC5	1431469_a_at 1448960_at	17047	-0.158	-0.3965	No
121	IL4	1449864_at	17195	-0.165	-0.4011	No
122	LHX6	1422262_a_at 1425094_a_at	17275	-0.169	-0.4026	No
123	HTR2B	1422125_at	17621	-0.190	-0.4160	No
124	AMOT	1425907_s_at 1427584_at 1454890_at	17647	-0.191	-0.4147	No
125	COL15A1	1448755_at	17661	-0.192	-0.4128	No
126	GRM1	1425700_at	17725	-0.196	-0.4132	No
127	NEXN	1435649_at 1446084_at	17787	-0.200	-0.4134	No
128	RFX5	1423103_at	17861	-0.205	-0.4141	No
129	PLAGL2	1417517_at 1417518_at 1417519_at 1442235_at	17892	-0.208	-0.4129	No
130	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	18070	-0.220	-0.4182	No
131	ZIC1	1423477_at 1439627_at	18082	-0.221	-0.4158	No
132	TPT1	1416642_a_at 1416643_at	18341	-0.240	-0.4246	No
133	GPX1	1460671_at	18372	-0.243	-0.4229	No
134	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	18516	-0.257	-0.4261	No
135	NFKB2	1425902_a_at 1429128_x_at	18625	-0.267	-0.4277	No
136	CAPN1	1417228_at 1417229_at	18878	-0.290	-0.4355	No
137	PIP5K1B	1418144_a_at 1426009_a_at	18988	-0.304	-0.4366	No
138	LNPEP	1433747_at 1438432_at 1439326_at 1443907_at 1456347_at	18996	-0.304	-0.4331	No
139	HOXA3	1427433_s_at 1441070_at 1452421_at	19039	-0.309	-0.4310	No
140	ASB3	1417361_at	19369	-0.355	-0.4416	No
141	SLC25A28	1424776_a_at	19407	-0.361	-0.4386	No
142	PSEN1	1420261_at 1421853_at 1425549_at 1450399_at	19920	-0.451	-0.4564	Yes
143	ANKRD28	1434630_at 1454801_at	19928	-0.452	-0.4509	Yes
144	SH2D3C	1415886_at	19948	-0.456	-0.4459	Yes
145	CHN2	1428573_at 1428574_a_at 1441158_at 1443626_at	19981	-0.464	-0.4414	Yes
146	DDX17	1437773_x_at 1439037_at 1452155_a_at	20045	-0.481	-0.4381	Yes
147	AUTS2	1427293_a_at 1438680_at 1441869_x_at 1442360_at 1443062_at 1443070_at 1443770_x_at 1444069_at 1445307_at 1445469_at 1445538_at 1446849_at 1452379_at 1457139_at 1458592_at 1459338_at	20092	-0.493	-0.4339	Yes
148	LPHN1	1428510_at 1452812_at	20228	-0.531	-0.4333	Yes
149	TRERF1	1444654_at	20236	-0.533	-0.4268	Yes
150	MAZ	1427099_at	20240	-0.534	-0.4201	Yes
151	PLSCR3	1431081_a_at 1449020_at	20426	-0.588	-0.4210	Yes
152	POLR1A	1417775_at 1446439_at 1447597_at 1447598_x_at 1456066_a_at 1460215_at	20533	-0.626	-0.4178	Yes
153	CHCHD7	1440158_x_at 1444318_at 1446844_at 1454640_at	20620	-0.661	-0.4133	Yes
154	ALDH4A1	1452375_at	20663	-0.679	-0.4065	Yes
155	ARF6	1418822_a_at 1418823_at 1418824_at	20713	-0.708	-0.3997	Yes
156	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	20914	-0.828	-0.3982	Yes
157	PLAG1	1421745_at 1443943_at	20954	-0.857	-0.3890	Yes
158	MEIS1	1440431_at 1443260_at 1445773_at 1450992_a_at 1459423_at 1459512_at	20964	-0.864	-0.3783	Yes
159	RASAL2	1436910_at 1444671_at	21059	-0.936	-0.3706	Yes
160	ID2	1422537_a_at 1435176_a_at 1453596_at	21065	-0.944	-0.3588	Yes
161	STC1	1421984_at 1450448_at	21228	-1.105	-0.3520	Yes
162	TCF7L2	1425229_a_at 1426639_a_at 1429427_s_at 1429428_at 1441756_at 1446452_at 1447071_at	21245	-1.128	-0.3383	Yes
163	BTG2	1416250_at 1448272_at	21613	-1.794	-0.3321	Yes
164	TOMM20	1423080_at 1423081_a_at 1435187_at 1435534_a_at 1455357_x_at 1458692_at	21678	-1.999	-0.3094	Yes
165	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	21702	-2.099	-0.2835	Yes
166	NRP1	1418084_at 1448943_at 1448944_at 1457198_at	21706	-2.116	-0.2564	Yes
167	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	21708	-2.119	-0.2293	Yes
168	TMOD3	1423088_at 1423089_at 1438556_a_at 1439626_at 1455708_at 1456913_at	21748	-2.332	-0.2011	Yes
169	TLN1	1436042_at 1448402_at 1457782_at	21764	-2.390	-0.1711	Yes
170	NEDD4L	1423269_a_at 1423270_at 1440139_at 1447171_at 1456044_at 1457374_at	21792	-2.631	-0.1386	Yes
171	OLIG3	1421728_at	21795	-2.639	-0.1048	Yes
172	PA2G4	1420142_s_at 1423060_at 1435372_a_at 1450854_at 1460265_at	21876	-3.605	-0.0622	Yes
173	HINT1	1424017_a_at 1424018_at 1457286_at	21918	-5.057	0.0008	Yes