Details for gene set V$COMP1

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	ATM_minus
GeneSet	V$COMP1_01
Enrichment Score (ES)	0.46636996
Normalized Enrichment Score (NES)	1.3458015
Nominal p-value	0.050943397
FDR q-value	0.63783425
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TCF12	1421908_a_at 1427670_a_at 1438762_at 1439209_at 1439619_at 1443012_at 1444620_at 1445093_at 1445133_at 1457524_at 1458337_at	11	4.990	0.1188	Yes
2	GNB4	1419469_at 1419470_at	99	2.892	0.1840	Yes
3	NR4A3	1421079_at 1421080_at	108	2.785	0.2503	Yes
4	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	235	2.127	0.2954	Yes
5	SLC1A3	1426340_at 1426341_at 1439072_at 1440491_at 1443749_x_at 1452031_at	243	2.099	0.3453	Yes
6	ELAVL2	1421881_a_at 1421882_a_at 1421883_at 1433052_at	474	1.509	0.3708	Yes
7	NFIB	1416293_at 1427680_a_at 1434101_at 1434102_at 1438072_at 1438244_at 1442214_at 1444800_at 1448288_at 1454834_at	683	1.164	0.3891	Yes
8	PPAP2A	1422619_at 1422620_s_at 1425449_at	689	1.154	0.4165	Yes
9	CPT1A	1434866_x_at 1438156_x_at 1460409_at	743	1.097	0.4403	Yes
10	HMGB1	1416176_at 1425048_a_at 1435324_x_at	1132	0.788	0.4414	Yes
11	NFYB	1419266_at 1419267_at	1321	0.682	0.4491	Yes
12	SERPINH1	1450843_a_at 1456733_x_at	1747	0.539	0.4425	Yes
13	MBNL1	1416904_at 1439686_at 1440315_at 1445106_at 1457924_at	1999	0.471	0.4423	Yes
14	COL1A1	1423669_at 1455494_at	2113	0.441	0.4477	Yes
15	SFRS6	1416720_at 1416721_s_at 1447898_s_at 1448454_at	2139	0.436	0.4570	Yes
16	NR1D1	1421802_at 1426464_at	2160	0.431	0.4664	Yes
17	ILF3	1422546_at 1436802_at 1460669_at	2425	0.380	0.4634	No
18	GTF2A1	1421357_at	3150	0.282	0.4370	No
19	IGF1	1419519_at 1436497_at 1437401_at 1452014_a_at	3229	0.274	0.4400	No
20	NR2E1	1434921_at 1457289_at	3892	0.219	0.4149	No
21	YARS	1460638_at	4562	0.179	0.3886	No
22	RING1	1422647_at	4827	0.166	0.3804	No
23	NDST4	1421318_at 1431452_at 1450195_at	4915	0.162	0.3803	No
24	OTP	1422285_at	4982	0.159	0.3811	No
25	SPINK5	1430567_at	5058	0.155	0.3814	No
26	MITF	1422025_at 1455214_at	5203	0.150	0.3784	No
27	SALL3	1441186_at 1452386_at	5573	0.135	0.3647	No
28	SALL1	1450489_at	6246	0.113	0.3367	No
29	ZIC4	1421539_at 1456417_at	6275	0.113	0.3381	No
30	COL4A5	1425475_at 1425476_at	6281	0.112	0.3405	No
31	WNT9A	1425889_at 1436978_at	6622	0.102	0.3274	No
32	GNAT1	1460212_at	6795	0.098	0.3219	No
33	SLC2A12	1435911_s_at 1455501_at	6799	0.097	0.3241	No
34	MPP2	1449173_at	7062	0.090	0.3143	No
35	NAV3	1459440_at	7352	0.083	0.3030	No
36	STARD13	1452604_at	8041	0.066	0.2731	No
37	DAXX	1419026_at	8266	0.062	0.2643	No
38	INHA	1422728_at	8349	0.059	0.2620	No
39	PLA1A	1417785_at	8462	0.057	0.2582	No
40	PROX1	1421336_at 1437894_at 1457432_at	8878	0.047	0.2403	No
41	ANGPT1	1421441_at 1438936_s_at 1438937_x_at 1439066_at 1446656_at 1450717_at 1457381_at	9034	0.043	0.2343	No
42	HOXC6	1427361_at 1427362_x_at 1427454_at	9075	0.043	0.2335	No
43	RAB3C	1432415_at 1432432_a_at 1449494_at	9129	0.041	0.2320	No
44	AMBN	1449417_at	9195	0.040	0.2300	No
45	SPRY4	1422020_at 1422021_at 1440867_at 1445669_at	9216	0.040	0.2301	No
46	TLE4	1425650_at 1430384_at 1450853_at	10054	0.022	0.1923	No
47	DCX	1418139_at 1418140_at 1418141_at 1448974_at	10123	0.021	0.1897	No
48	FGF10	1420690_at	10893	0.006	0.1546	No
49	TSC1	1422043_at 1439989_at 1455252_at	11052	0.003	0.1475	No
50	HOXC4	1422870_at	11549	-0.008	0.1250	No
51	KLF7	1419354_at 1419355_at 1419356_at 1449439_at 1458389_at	11710	-0.011	0.1179	No
52	HSD3B7	1416968_a_at 1442912_at	11852	-0.014	0.1118	No
53	HTR7	1422235_at	12218	-0.022	0.0956	No
54	LGI1	1423183_at 1435851_at	12402	-0.026	0.0878	No
55	FUT11	1431066_at 1434123_at 1437748_at	12525	-0.028	0.0829	No
56	LMO1	1418478_at	12533	-0.028	0.0833	No
57	HOXA10	1431475_a_at 1446408_at	12703	-0.032	0.0763	No
58	GRIA3	1420563_at 1434728_at	13110	-0.041	0.0587	No
59	CREB5	1440089_at 1442576_at 1457222_at	13244	-0.044	0.0537	No
60	DLX5	1449863_a_at	13816	-0.057	0.0289	No
61	HOXA2	1419602_at	14336	-0.071	0.0069	No
62	FKBP11	1417267_s_at 1425839_at 1425938_a_at	14578	-0.077	-0.0023	No
63	MAPK9	1421876_at 1421877_at 1421878_at	14712	-0.081	-0.0065	No
64	COL4A6	1421006_at 1421007_at	14877	-0.085	-0.0119	No
65	SLC5A3	1422170_at	14899	-0.086	-0.0108	No
66	ERBB4	1427783_at 1446211_at 1447043_at	15046	-0.090	-0.0154	No
67	EBF2	1418494_at 1446128_at 1449101_at 1449102_at	15763	-0.111	-0.0455	No
68	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	16059	-0.121	-0.0561	No
69	EYA1	1421727_at 1443117_at 1457424_at	16261	-0.128	-0.0622	No
70	PDE1B	1449420_at	16263	-0.128	-0.0592	No
71	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	16818	-0.149	-0.0810	No
72	NUMB	1416891_at 1425368_a_at 1444337_at 1457175_at	16935	-0.153	-0.0827	No
73	CACNG3	1450520_at	17172	-0.164	-0.0896	No
74	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	18070	-0.220	-0.1254	No
75	ZIC1	1423477_at 1439627_at	18082	-0.221	-0.1206	No
76	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	18093	-0.221	-0.1158	No
77	PHF6	1430415_at 1453761_at 1454625_at	18271	-0.234	-0.1182	No
78	PRDM8	1431852_at 1455925_at	18365	-0.242	-0.1167	No
79	MBNL2	1433754_at 1436858_at 1446475_at 1455827_at 1457237_at 1457477_at	19548	-0.382	-0.1617	No
80	NCAM1	1421966_at 1425126_at 1426864_a_at 1426865_a_at 1439556_at 1440067_at 1441995_at 1442680_at 1443018_at 1450437_a_at 1450438_at 1454140_at	19767	-0.421	-0.1616	No
81	HIC2	1427581_at 1437571_at 1454944_at	19877	-0.441	-0.1560	No
82	PRKCBP1	1426614_at 1429415_at 1445827_at 1456143_at 1458617_at	20457	-0.603	-0.1681	No
83	DHCR24	1418129_at 1451895_a_at	20699	-0.699	-0.1624	No
84	GRAP2	1456432_at	21016	-0.901	-0.1553	No
85	TCF7L2	1425229_a_at 1426639_a_at 1429427_s_at 1429428_at 1441756_at 1446452_at 1447071_at	21245	-1.128	-0.1388	No
86	KCTD15	1435339_at	21273	-1.161	-0.1123	No
87	CDK6	1435338_at 1440040_at 1455287_at 1460291_at	21301	-1.204	-0.0847	No
88	DLX1	1449470_at	21371	-1.298	-0.0569	No
89	FLI1	1422024_at 1433512_at 1441584_at	21536	-1.610	-0.0259	No
90	EXT1	1417730_at 1439877_at 1440011_at 1440092_at 1456655_at 1458054_at 1458296_at	21631	-1.845	0.0140	No