DatasetSet_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls
#ATM_minus_versus_SCID
Phenotypephenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in classATM_minus
GeneSetV$CDP_02
Enrichment Score (ES)0.55597633
Normalized Enrichment Score (NES)1.5961604
Nominal p-value0.003992016
FDR q-value0.49387425
FWER p-Value0.506
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$CDP_02   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1WDR121417270_at 1448646_at 1459762_x_at843.0470.0971Yes
2SLC1A31426340_at 1426341_at 1439072_at 1440491_at 1443749_x_at 1452031_at2432.0990.1594Yes
3CNIH1423727_at3061.8610.2182Yes
4HNRPA2B11420365_a_at 1433829_a_at 1433830_at 1434047_x_at3131.8340.2787Yes
5PRKAG11417690_at 1433533_x_at 1457803_at3261.8030.3378Yes
6DOCK41431114_at 1436405_at 1441462_at 1441469_at 1446283_at 1457146_at 1459279_at3621.7180.3931Yes
7JARID21422698_s_at 1446082_at 1450710_at 1456661_at4051.6480.4458Yes
8DACH11420694_a_at 1420695_at 1433743_at 1447174_at 1459381_at5061.4330.4886Yes
9PTGS21417262_at 1417263_at11690.7610.4835Yes
10TCF41416723_at 1416724_x_at 1416725_at 1424089_a_at 1434148_at 1434149_at 1439336_at 1440106_at 1446386_at 1458201_at12030.7410.5066Yes
11NRXN31419825_at 1431153_at 1432931_at 1433788_at 1438193_at 1439629_at 1442423_at 1444700_at 1456137_at 1460101_at16810.5590.5032Yes
12STAG21421849_at 1450396_at16870.5570.5215Yes
13PPM1L1435699_at 1435787_at 1438012_at18590.5050.5304Yes
14LCP11415983_at 1448160_at19110.4930.5444Yes
15MBNL11416904_at 1439686_at 1440315_at 1445106_at 1457924_at19990.4710.5560Yes
16CS1422577_at 1422578_at 1450667_a_at26070.3510.5398No
17LPHN21434111_at 1434112_at 1444906_at30550.2920.5290No
18MARCKS1415971_at 1415972_at 1430311_at 1437034_x_at 1456028_x_at36890.2340.5078No
19HOXA71449499_at36960.2340.5153No
20MAB21L21418934_at39770.2130.5095No
21PTMA1423455_at41040.2050.5106No
22PHACTR31429651_at42280.1970.5114No
23PDZRN41456512_at44170.1860.5090No
24NDST41421318_at 1431452_at 1450195_at49150.1620.4916No
25CACNA2D31419225_at50200.1570.4921No
26KIF1B1423994_at 1423995_at 1425270_at 1451200_at 1451642_at 1451762_a_at 1455182_at 1458426_at50290.1570.4969No
27POU3F41422164_at 1422165_at51620.1510.4959No
28SALL11450489_at62460.1130.4501No
29CDH91427618_at62760.1130.4525No
30HNF4G1422182_at 1450518_at 1460127_at66800.1010.4374No
31TBX31437479_x_at 1439567_at 1444594_at 1445757_at 1448029_at68090.0970.4348No
32A2BP11418314_a_at 1438217_at 1447735_x_at 1455358_at 1456921_at70290.0910.4278No
33ERG1425370_a_at 1440244_at72000.0870.4229No
34IGSF41417376_a_at 1417377_at 1417378_at 1431611_a_at75420.0780.4098No
35GNAQ1428938_at 1428939_s_at 1428940_at 1429559_at 1446688_at 1447593_x_at 1450115_at 1455729_at 1458159_at75720.0770.4111No
36TOB11423176_at 1440844_at76070.0760.4120No
37SEMA5B1422146_at 1435963_at77050.0740.4100No
38LIF1421206_at 1421207_at 1450160_at83000.0610.3849No
39CPEB41420617_at 1420618_at 1449931_at86380.0520.3712No
40FOXD31422210_at89830.0450.3569No
41PTF1A1419424_at90720.0430.3543No
42SEMA6A1421414_a_at 1425903_at 1436458_at100670.0220.3096No
43DCX1418139_at 1418140_at 1418141_at 1448974_at101230.0210.3078No
44HOXA111420414_at101900.0200.3054No
45PKD2L21419422_at 1449469_at102240.0200.3045No
46LRCH21436877_at 1441273_at103610.0170.2989No
47GNAO11421152_a_at 1448031_at 1460383_at104430.0150.2957No
48FGF91420795_at 1438718_at 1445258_at109410.0050.2731No
49ETV41423232_at 1443381_at110140.0040.2699No
50OGG11430078_a_at 1448815_at11293-0.0020.2573No
51EPHA31425574_at 1425575_at 1426057_a_at 1443273_at11663-0.0100.2407No
52SIX11427277_at11680-0.0100.2404No
53SYT11421990_at 1431191_a_at 1433884_at 1438282_at 1442557_at 1457497_at11991-0.0170.2267No
54HCN11450193_at12643-0.0310.1980No
55PITX21424797_a_at 1450482_a_at12774-0.0340.1931No
56SRPK21417134_at 1417135_at 1417136_s_at 1431372_at 1435746_at 1440080_at 1442241_at 1442980_at 1447755_at 1448603_at12886-0.0360.1893No
57LSAMP1443754_x_at 1455636_at 1460092_at12887-0.0360.1905No
58GRIA31420563_at 1434728_at13110-0.0410.1817No
59SOX91424950_at 1433889_at 1451538_at13204-0.0440.1789No
60SLC5A101440834_at13769-0.0560.1549No
61SP81440519_at13791-0.0570.1559No
62HOXA21419602_at14336-0.0710.1333No
63SREBF21426744_at 1452174_at14680-0.0800.1203No
64DGKB1440901_at 1442860_at 1443631_at 1455361_at14746-0.0820.1200No
65GC1426547_at15066-0.0900.1084No
66OTX11437601_at15222-0.0950.1045No
67GBX21420337_at15303-0.0970.1040No
68BHLHB51418271_at16141-0.1230.0698No
69MYH101441057_at 1452740_at16148-0.1240.0736No
70HOXB81452493_s_at16753-0.1460.0508No
71SLC6A91417636_at 1431812_a_at16866-0.1510.0507No
72ANKRD21419621_at17078-0.1590.0463No
73SLITRK21441483_at17501-0.1810.0330No
74CCND21416122_at 1416123_at 1416124_at 1430127_a_at 1434745_at 1448229_s_at 1455956_x_at17710-0.1950.0300No
75GTF2IRD11451899_a_at 1460364_at17927-0.2100.0270No
76IL1RAPL11445821_at 1458964_at18289-0.2350.0183No
77GPX11460671_at18372-0.2430.0226No
78DUSP101417163_at 1417164_at18401-0.2460.0295No
79CDCA71428069_at 1445681_at18932-0.2960.0150No
80RPA31448938_at19284-0.3440.0104No
81GPM6A1426442_at 1456741_s_at 1459303_at20340-0.562-0.0193No
82MEIS11440431_at 1443260_at 1445773_at 1450992_a_at 1459423_at 1459512_at20964-0.864-0.0192No
83MEF2C1421027_a_at 1421028_a_at 1424852_at 1439946_at 1445420_at 1446484_at 1451506_at 1451507_at 1458551_at21658-1.9210.0127No
Table: GSEA details [plain text format]



Fig 2: V$CDP_02   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$CDP_02: Random ES distribution   
Gene set null distribution of ES for V$CDP_02