Details for gene set V$AP2REP

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	SCID
GeneSet	V$AP2REP_01
Enrichment Score (ES)	-0.47347203
Normalized Enrichment Score (NES)	-1.4372447
Nominal p-value	0.01980198
FDR q-value	0.36555627
FWER p-Value	0.99

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	NR3C2	1435991_at 1440306_at 1442533_at	300	1.879	0.0280	No
2	YWHAG	1420816_at 1420817_at 1450012_x_at 1459693_x_at	589	1.289	0.0434	No
3	GRIN3A	1436575_at 1438866_at 1458378_at	1038	0.856	0.0419	No
4	PPOX	1416618_at 1441862_at 1448065_at	1138	0.785	0.0548	No
5	FHIT	1425893_a_at	1316	0.683	0.0619	No
6	CD3D	1422828_at	1371	0.663	0.0742	No
7	NFKBIE	1431843_a_at 1458299_s_at	1470	0.626	0.0836	No
8	ACVR1	1416786_at 1416787_at 1448460_at 1457551_at	1966	0.480	0.0715	No
9	EFNB1	1418285_at 1418286_a_at 1451591_a_at	2411	0.382	0.0597	No
10	BCL9L	1419180_at 1438806_at 1443700_at 1444855_at	2594	0.353	0.0592	No
11	MORF4L2	1415778_at 1439413_x_at	2613	0.350	0.0662	No
12	ADNP	1423069_at	2646	0.346	0.0724	No
13	GATA1	1449232_at	2701	0.337	0.0774	No
14	MPO	1415960_at	3540	0.245	0.0444	No
15	VIM	1438118_x_at 1450641_at 1456292_a_at	3705	0.233	0.0421	No
16	GRIN2A	1421616_at	3806	0.225	0.0425	No
17	WNT4	1450782_at	3884	0.220	0.0438	No
18	PTMA	1423455_at	4104	0.205	0.0384	No
19	PDZRN4	1456512_at	4417	0.186	0.0282	No
20	SERPINB2	1419082_at	4440	0.185	0.0313	No
21	NRG1	1456524_at	4630	0.175	0.0265	No
22	IRX4	1419539_at	4663	0.174	0.0289	No
23	TRPM3	1439026_at 1441966_at 1443723_at 1445555_at 1456633_at 1456923_at 1457927_at	4838	0.165	0.0246	No
24	UBE2E2	1424358_at 1447025_at	5683	0.132	-0.0112	No
25	SLC6A5	1425992_at	5812	0.127	-0.0142	No
26	ATP5H	1423676_at 1435112_a_at	5953	0.122	-0.0179	No
27	EYA4	1432461_at 1442542_at 1445809_at 1456647_a_at 1456665_at	5993	0.121	-0.0170	No
28	NOSTRIN	1441075_at	6424	0.108	-0.0343	No
29	DAAM1	1431035_at 1455244_at 1458662_at	6477	0.106	-0.0343	No
30	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	6545	0.105	-0.0351	No
31	SMURF2	1429045_at 1429046_at 1454894_at	6729	0.099	-0.0412	No
32	COBL	1434917_at 1442076_at	6960	0.093	-0.0497	No
33	NLGN3	1456384_at	7121	0.089	-0.0551	No
34	IGFALS	1422826_at	7172	0.087	-0.0554	No
35	TACSTD2	1423323_at	7339	0.083	-0.0612	No
36	PCSK6	1426981_at	7559	0.078	-0.0695	No
37	SCAMP5	1450247_a_at 1451224_at	7618	0.076	-0.0705	No
38	MSN	1421814_at 1450379_at	7627	0.076	-0.0691	No
39	EIF5A	1437859_x_at 1451470_s_at	8504	0.055	-0.1081	No
40	ZDHHC15	1442274_at	8591	0.053	-0.1108	No
41	PTGDS	1423859_a_at 1423860_at	8609	0.053	-0.1104	No
42	RORA	1420583_a_at 1424034_at 1424035_at 1436325_at 1436326_at 1441085_at 1443511_at 1443647_at 1446360_at 1455165_at 1457177_at 1458129_at	8912	0.046	-0.1232	No
43	HOXC6	1427361_at 1427362_x_at 1427454_at	9075	0.043	-0.1297	No
44	TNKS1BP1	1427051_at	9112	0.042	-0.1304	No
45	GNG3	1417428_at	9308	0.038	-0.1385	No
46	PDYN	1416266_at	9316	0.038	-0.1380	No
47	NXPH1	1436718_at 1438388_at 1459921_at	9438	0.035	-0.1428	No
48	NUDT11	1426887_at	9703	0.030	-0.1542	No
49	GMPPB	1439030_at	9734	0.029	-0.1550	No
50	NEFL	1426255_at	9806	0.027	-0.1576	No
51	ZHX2	1455210_at	9871	0.026	-0.1600	No
52	ADAMTS4	1452595_at	9961	0.024	-0.1635	No
53	JMJD1C	1426900_at 1439998_at 1441592_at 1448049_at 1458521_at	10182	0.020	-0.1732	No
54	IRAK1	1448668_a_at 1460649_at	10222	0.020	-0.1745	No
55	TNPO1	1433585_at 1447034_at 1455043_at	10437	0.015	-0.1840	No
56	ATP2B2	1420402_at 1420403_at 1433888_at	10477	0.014	-0.1855	No
57	CD3G	1419178_at	10662	0.011	-0.1936	No
58	BSCL2	1420632_a_at 1437345_a_at	10874	0.007	-0.2032	No
59	JPH2	1421453_at 1455404_at	11030	0.003	-0.2102	No
60	PHC2	1416048_at 1437239_x_at 1439639_at	11494	-0.006	-0.2313	No
61	BTBD9	1431230_a_at 1434769_at 1435706_at 1440548_at 1444827_at 1445220_at 1458043_at	12082	-0.019	-0.2578	No
62	EED	1448653_at	12101	-0.019	-0.2582	No
63	FXYD6	1417343_at	12179	-0.021	-0.2612	No
64	RAP2C	1428119_a_at 1437016_x_at 1460430_at	12371	-0.025	-0.2694	No
65	IL3	1450566_at	12408	-0.026	-0.2705	No
66	DDIT4L	1439332_at 1444139_at 1451751_at	12779	-0.034	-0.2867	No
67	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	12878	-0.036	-0.2904	No
68	ZBTB4	1429722_at 1460488_at	13048	-0.040	-0.2973	No
69	COL16A1	1427986_a_at	13079	-0.041	-0.2977	No
70	CYB561D1	1431021_at 1434226_at 1459837_at	13623	-0.053	-0.3215	No
71	RHOG	1422572_at	13658	-0.054	-0.3218	No
72	CLPTM1	1416883_at	13713	-0.055	-0.3231	No
73	MRVI1	1422245_a_at 1459665_s_at	13883	-0.059	-0.3295	No
74	CHRM1	1439611_at 1450833_at	14254	-0.068	-0.3450	No
75	ARID1A	1447104_at	14806	-0.084	-0.3684	No
76	NKX3-1	1449998_at	15236	-0.095	-0.3859	No
77	AMFR	1450102_a_at	15263	-0.096	-0.3850	No
78	EPHA1	1422917_at 1432399_a_at 1432400_at	15546	-0.104	-0.3956	No
79	EBF2	1418494_at 1446128_at 1449101_at 1449102_at	15763	-0.111	-0.4030	No
80	CYP8B1	1449309_at	15852	-0.115	-0.4045	No
81	DYRK1B	1422254_a_at	15903	-0.116	-0.4042	No
82	MAPT	1417885_at 1424718_at 1424719_a_at 1445634_at 1455028_at	15913	-0.116	-0.4020	No
83	MYOZ1	1448636_at 1460202_at	16028	-0.120	-0.4046	No
84	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	16059	-0.121	-0.4033	No
85	BHLHB5	1418271_at	16141	-0.123	-0.4043	No
86	NHLH2	1436888_at	16164	-0.124	-0.4025	No
87	NUDT10	1435061_at	16172	-0.124	-0.4001	No
88	BMP1	1426238_at 1427457_a_at 1427458_at 1446007_at	16223	-0.127	-0.3995	No
89	JPH1	1421520_at 1438428_at	16496	-0.136	-0.4090	No
90	RHOJ	1418892_at 1444982_at	16767	-0.147	-0.4181	No
91	PARD6A	1449100_at	16988	-0.155	-0.4247	No
92	PBX1	1430183_at 1440037_at 1440954_at 1442846_at 1449542_at 1458853_at	17029	-0.157	-0.4231	No
93	PHYHIPL	1427023_at 1437062_s_at	17183	-0.164	-0.4264	No
94	LCAT	1417043_at	17210	-0.166	-0.4240	No
95	PAK6	1445475_at 1455200_at	17736	-0.197	-0.4437	No
96	PANK1	1418715_at 1429813_at 1429814_at 1431028_a_at 1457110_at	17887	-0.207	-0.4459	No
97	CPNE1	1433439_at	17920	-0.209	-0.4427	No
98	PIK3R3	1445097_at 1447068_at 1456482_at	17965	-0.212	-0.4400	No
99	SMARCA5	1440048_at	18481	-0.253	-0.4580	No
100	BCL2L11	1426334_a_at 1435448_at 1435449_at 1456005_a_at 1456006_at 1459794_at	18721	-0.276	-0.4628	No
101	DNMT3A	1423063_at 1423064_at 1423065_at 1423066_at 1442309_at 1460324_at	18801	-0.284	-0.4602	No
102	PUM1	1423117_at 1456054_a_at 1460325_at	18979	-0.302	-0.4616	No
103	PHF12	1434922_at 1453579_at	19240	-0.337	-0.4660	Yes
104	ARL6IP2	1416793_at 1416794_at 1431197_at 1435594_at	19333	-0.350	-0.4624	Yes
105	ITSN2	1423184_at 1431772_a_at 1435023_at 1445375_at 1446595_at 1446735_at 1446911_at	19457	-0.369	-0.4599	Yes
106	WDTC1	1434560_at	19588	-0.389	-0.4572	Yes
107	GNB2	1450623_at	19688	-0.404	-0.4527	Yes
108	CALM3	1426710_at 1438825_at 1438826_x_at 1450864_at	19734	-0.411	-0.4457	Yes
109	RPL22	1448398_s_at 1453118_s_at	19871	-0.440	-0.4421	Yes
110	YBX2	1420762_a_at	20493	-0.615	-0.4569	Yes
111	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	20505	-0.618	-0.4437	Yes
112	ECH1	1448491_at	20512	-0.622	-0.4301	Yes
113	SCAMP3	1416294_at	20930	-0.839	-0.4306	Yes
114	POLR2A	1422311_a_at 1426242_at 1458710_at	20948	-0.854	-0.4124	Yes
115	CACNB3	1448656_at	21008	-0.896	-0.3952	Yes
116	CBLL1	1421122_at 1437203_at 1458261_at	21050	-0.932	-0.3764	Yes
117	TNPO2	1425592_at 1425593_at 1437283_at	21057	-0.935	-0.3559	Yes
118	MYO1C	1419648_at 1419649_s_at 1449550_at 1449551_at	21287	-1.175	-0.3402	Yes
119	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	21478	-1.495	-0.3157	Yes
120	LTBP3	1418049_at 1437833_at 1438312_s_at 1456189_x_at	21698	-2.090	-0.2793	Yes
121	PDE10A	1419389_at 1419390_at 1432490_a_at 1439618_at 1458499_at	21716	-2.162	-0.2320	Yes
122	SERPINF1	1416168_at 1453724_a_at	21816	-2.760	-0.1752	Yes
123	BRD4	1424922_a_at 1440078_at 1450711_at 1451870_a_at 1458708_at	21833	-2.916	-0.1111	Yes
124	CYR61	1416039_x_at 1417848_at 1417849_at 1438133_a_at 1442340_x_at 1457823_at 1459462_at	21924	-5.210	0.0005	Yes