Details for gene set SMALL_GTPASE_MEDIATED_SIGNAL

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	SMALL_GTPASE_MEDIATED_SIGNAL_TRANSDUCTION
Enrichment Score (ES)	-0.5728694
Normalized Enrichment Score (NES)	-1.7233242
Nominal p-value	0.0
FDR q-value	0.31049356
FWER p-Value	0.747

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	APOE	1432466_a_at	369	2.317	0.0284	No
2	RHOB	1449110_at	1039	1.267	0.0225	No
3	ARFIP2	1424240_at 1435498_at	1473	0.974	0.0218	No
4	FGD3	1433398_at 1450235_at 1454593_at	2108	0.712	0.0067	No
5	ROCK1	1423444_at 1423445_at 1441162_at 1446518_at 1450994_at 1460729_at	2376	0.630	0.0068	No
6	PARK7	1416526_a_at 1456194_a_at	2781	0.529	-0.0014	No
7	RRAS	1418448_at	2917	0.502	0.0023	No
8	ADRA2A	1423022_at 1433600_at 1433601_at	3869	0.368	-0.0341	No
9	APOA1	1419232_a_at 1419233_x_at 1438840_x_at 1455201_x_at	3909	0.363	-0.0287	No
10	ARHGAP4	1419296_at 1443360_x_at 1458190_at	3974	0.357	-0.0247	No
11	CDH13	1423551_at 1431824_at 1454015_a_at 1459535_at	4136	0.341	-0.0254	No
12	FGD1	1416865_at 1437369_at 1459278_at	4158	0.340	-0.0197	No
13	IGF1	1419519_at 1436497_at 1437401_at 1452014_a_at	4190	0.338	-0.0145	No
14	RHOD	1419061_at	4751	0.296	-0.0343	No
15	CFL1	1448346_at 1455138_x_at	6302	0.224	-0.1009	No
16	MFN2	1441424_at 1448131_at 1451900_at	6624	0.211	-0.1115	No
17	MRAS	1449590_a_at	7283	0.186	-0.1379	No
18	DOCK1	1443390_at 1443760_at 1443991_at 1452220_at 1457806_at	7467	0.180	-0.1428	No
19	FGD2	1419515_at	8220	0.158	-0.1741	No
20	TSC1	1422043_at 1439989_at 1455252_at	8344	0.154	-0.1767	No
21	RAC1	1423734_at 1437674_at 1451086_s_at	8362	0.154	-0.1745	No
22	FGD6	1419322_at 1435467_at	8416	0.152	-0.1739	No
23	FGF2	1449826_a_at	8924	0.137	-0.1945	No
24	LIMK1	1417627_a_at 1425836_a_at 1456234_at 1458989_at	9540	0.121	-0.2202	No
25	PLD1	1425739_at 1437112_at 1437113_s_at	9968	0.109	-0.2376	No
26	FARP2	1424583_at 1435985_at 1439681_at 1440799_s_at	10056	0.107	-0.2395	No
27	ARHGDIG	1448660_at	10211	0.103	-0.2446	No
28	FGD5	1460578_at	10545	0.095	-0.2580	No
29	ARHGAP5	1423194_at 1450896_at 1450897_at 1457410_at	10717	0.091	-0.2640	No
30	PLD2	1417237_at 1457252_x_at	11688	0.066	-0.3071	No
31	ABRA	1458455_at	12211	0.053	-0.3299	No
32	ABCA1	1421839_at 1421840_at 1450392_at	12616	0.043	-0.3476	No
33	APOC3	1418278_at	12848	0.037	-0.3574	No
34	ABR	1433477_at	12976	0.033	-0.3626	No
35	NOTCH2	1451889_at 1455556_at	13039	0.032	-0.3648	No
36	ARHGAP29	1441618_at 1444512_at 1454745_at	13061	0.031	-0.3652	No
37	NF1	1438067_at 1441523_at 1443097_at 1452525_a_at	13461	0.020	-0.3830	No
38	FGD4	1425037_at 1426041_a_at 1426042_at 1451659_at 1455337_at	14222	-0.004	-0.4177	No
39	RASSF1	1441737_s_at 1448855_at 1456994_at 1457788_at	14460	-0.012	-0.4283	No
40	PLCE1	1452398_at	14701	-0.021	-0.4389	No
41	CDC42BPB	1434652_at 1459167_at	14894	-0.029	-0.4471	No
42	RTKN	1425601_a_at	15351	-0.047	-0.4671	No
43	PTPLAD1	1433706_a_at 1452427_s_at 1454698_at	15650	-0.062	-0.4795	No
44	LAT	1460651_at	15852	-0.072	-0.4873	No
45	SIAH2	1448170_at 1448171_at	16119	-0.088	-0.4977	No
46	ALS2	1417783_at 1417784_at 1431608_at 1446183_at	16495	-0.112	-0.5127	No
47	DMPK	1422989_a_at 1434944_at	16950	-0.149	-0.5305	No
48	RHOA	1437628_s_at	17032	-0.156	-0.5312	No
49	GRB2	1418508_a_at 1449111_a_at	17171	-0.170	-0.5342	No
50	GNB1	1417432_a_at 1425908_at 1454696_at 1459442_at	17559	-0.220	-0.5476	No
51	RGS19	1417786_a_at 1434940_x_at	17612	-0.228	-0.5455	No
52	RASGRP4	1425380_at	17686	-0.238	-0.5442	No
53	ARHGDIA	1451168_a_at	17877	-0.262	-0.5478	No
54	ARHGAP1	1424307_at 1451309_at	18044	-0.284	-0.5498	No
55	RRAGC	1415749_a_at	18063	-0.287	-0.5450	No
56	RHOG	1422572_at	18397	-0.339	-0.5537	No
57	LCK	1425396_a_at 1439145_at 1439146_s_at 1457917_at	18818	-0.421	-0.5646	Yes
58	CDC42BPG	1436197_at	18917	-0.444	-0.5604	Yes
59	SOS1	1421884_at 1421885_at 1421886_at	18996	-0.463	-0.5550	Yes
60	CENTD2	1428064_at	19167	-0.504	-0.5529	Yes
61	RREB1	1428657_at 1434741_at 1438216_at 1442047_at 1452862_at	19216	-0.514	-0.5450	Yes
62	DBNL	1460334_at	19671	-0.646	-0.5532	Yes
63	RALBP1	1417248_at 1448634_at	19716	-0.659	-0.5423	Yes
64	GRAP2	1456432_at	19875	-0.712	-0.5356	Yes
65	VAV3	1417122_at 1417123_at 1446795_at 1448600_s_at 1458630_at	20163	-0.833	-0.5325	Yes
66	ARF6	1418822_a_at 1418823_at 1418824_at	20186	-0.844	-0.5170	Yes
67	TAX1BP3	1424169_at	20455	-0.973	-0.5102	Yes
68	ARHGDIB	1426454_at	20514	-1.004	-0.4933	Yes
69	CRKL	1421953_at 1421954_at 1425604_at 1436950_at	20749	-1.171	-0.4811	Yes
70	RRAD	1422562_at	20772	-1.195	-0.4587	Yes
71	PDK1	1423747_a_at 1423748_at 1434974_at 1435836_at	20815	-1.229	-0.4366	Yes
72	TNK2	1448298_at	20872	-1.276	-0.4143	Yes
73	ARHGAP27	1416758_at 1457655_x_at	21152	-1.636	-0.3951	Yes
74	GRAP	1429387_at	21185	-1.677	-0.3637	Yes
75	ELMO1	1424523_at 1446610_at 1450208_a_at	21343	-1.914	-0.3335	Yes
76	CENTD3	1419833_s_at 1447407_at 1451282_at	21634	-2.598	-0.2960	Yes
77	CDC42BPA	1435847_at 1436380_at 1438449_at 1442260_at 1446945_at	21666	-2.698	-0.2447	Yes
78	RASGRP1	1421176_at 1431749_a_at 1434295_at 1450143_at	21672	-2.736	-0.1915	Yes
79	GTPBP2	1416690_at 1416691_at 1442305_at 1448437_a_at	21748	-3.015	-0.1360	Yes
80	MYO9B	1418031_at 1438533_at 1459110_at	21776	-3.233	-0.0740	Yes
81	KRIT1	1428729_at 1428730_at 1439317_at 1442125_at 1448701_a_at	21882	-4.161	0.0025	Yes