Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | REGULATION_OF_SMALL_GTPASE_MEDIATED_SIGNAL_TRANSDUCTION |
| Enrichment Score (ES) | -0.643358 |
| Normalized Enrichment Score (NES) | -1.5434577 |
| Nominal p-value | 0.030991735 |
| FDR q-value | 0.6027227 |
| FWER p-Value | 1.0 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | FGD3 | 1433398_at 1450235_at 1454593_at | 2108 | 0.712 | -0.0370 | No | ||
| 2 | FGD1 | 1416865_at 1437369_at 1459278_at | 4158 | 0.340 | -0.1022 | No | ||
| 3 | MFN2 | 1441424_at 1448131_at 1451900_at | 6624 | 0.211 | -0.1971 | No | ||
| 4 | FGD2 | 1419515_at | 8220 | 0.158 | -0.2567 | No | ||
| 5 | TSC1 | 1422043_at 1439989_at 1455252_at | 8344 | 0.154 | -0.2495 | No | ||
| 6 | RAC1 | 1423734_at 1437674_at 1451086_s_at | 8362 | 0.154 | -0.2375 | No | ||
| 7 | FGD6 | 1419322_at 1435467_at | 8416 | 0.152 | -0.2273 | No | ||
| 8 | FGD5 | 1460578_at | 10545 | 0.095 | -0.3165 | No | ||
| 9 | ABRA | 1458455_at | 12211 | 0.053 | -0.3881 | No | ||
| 10 | NOTCH2 | 1451889_at 1455556_at | 13039 | 0.032 | -0.4232 | No | ||
| 11 | NF1 | 1438067_at 1441523_at 1443097_at 1452525_a_at | 13461 | 0.020 | -0.4407 | No | ||
| 12 | FGD4 | 1425037_at 1426041_a_at 1426042_at 1451659_at 1455337_at | 14222 | -0.004 | -0.4750 | No | ||
| 13 | PLCE1 | 1452398_at | 14701 | -0.021 | -0.4951 | No | ||
| 14 | CDC42BPB | 1434652_at 1459167_at | 14894 | -0.029 | -0.5014 | No | ||
| 15 | ALS2 | 1417783_at 1417784_at 1431608_at 1446183_at | 16495 | -0.112 | -0.5652 | No | ||
| 16 | DMPK | 1422989_a_at 1434944_at | 16950 | -0.149 | -0.5735 | No | ||
| 17 | RASGRP4 | 1425380_at | 17686 | -0.238 | -0.5872 | No | ||
| 18 | CDC42BPG | 1436197_at | 18917 | -0.444 | -0.6064 | Yes | ||
| 19 | CENTD2 | 1428064_at | 19167 | -0.504 | -0.5758 | Yes | ||
| 20 | RALBP1 | 1417248_at 1448634_at | 19716 | -0.659 | -0.5460 | Yes | ||
| 21 | ARF6 | 1418822_a_at 1418823_at 1418824_at | 20186 | -0.844 | -0.4971 | Yes | ||
| 22 | ARHGAP27 | 1416758_at 1457655_x_at | 21152 | -1.636 | -0.4050 | Yes | ||
| 23 | CENTD3 | 1419833_s_at 1447407_at 1451282_at | 21634 | -2.598 | -0.2108 | Yes | ||
| 24 | CDC42BPA | 1435847_at 1436380_at 1438449_at 1442260_at 1446945_at | 21666 | -2.698 | 0.0123 | Yes |
