DatasetSet_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls
#ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls
#ATM_minus_versus_ATM_plus_repos
Phenotypephenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in classATM_plus
GeneSetPROTEIN_KINASE_CASCADE
Enrichment Score (ES)-0.45202437
Normalized Enrichment Score (NES)-1.5467205
Nominal p-value0.0
FDR q-value0.6528646
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: PROTEIN_KINASE_CASCADE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1EEF1D1428135_a_at 1439439_x_at 1449506_a_at 1459754_x_at404.5080.0231No
2SQSTM11440076_at 1442237_at 1444021_at 1450957_a_at1123.4120.0386No
3ATP2C11431196_at 1434386_at 1437738_at 1439215_at 1442742_at1823.0250.0521No
4SLC35B21423927_at 1429007_at2952.5260.0609No
5F21418897_at3622.3350.0708No
6FYN1417558_at 1441647_at 1448765_at3842.2710.0824No
7SOCS21418507_s_at 1438470_at 1441476_at 1442586_at 1446085_at 1449109_at5391.8860.0857No
8PPM1A1415678_at 1417221_at 1425537_at 1429500_at 1429501_s_at 1443903_at 1451943_a_at 1453171_s_at6511.7040.0900No
9MARK11419834_x_at 1425509_at 1425510_at 1425511_at 1449630_s_at7691.5640.0932No
10HMOX11448239_at8211.4890.0991No
11GJA11415800_at 1415801_at 1437992_x_at 1438650_x_at 1438945_x_at 1438973_x_at8581.4530.1054No
12BLK1422775_at8691.4370.1129No
13MAPK101437195_x_at 1448342_at 1458002_at 1458062_at 1458513_at9781.3230.1152No
14MAPK8IP31416437_a_at 1425975_a_at 1436676_at 1460628_at11661.1710.1131No
15BST21424921_at11931.1480.1182No
16ECM11448613_at12031.1440.1241No
17MAPK131448871_at12461.1140.1283No
18LGALS11419573_a_at 1455439_a_at13871.0210.1275No
19WNK21453355_at 1455424_at13981.0170.1327No
20ECT21419513_a_at14670.9780.1349No
21MAP2K71421416_at 1425393_a_at 1425512_at 1425513_at 1440442_at 1451736_a_at 1457182_at14940.9680.1391No
22GPR89A1424696_at19010.7850.1247No
23LGALS91421217_a_at19140.7810.1285No
24PRDX41416166_a_at 1416167_at 1431269_at19960.7490.1289No
25SOCS31416576_at 1455899_x_at 1456212_x_at20040.7440.1326No
26MKNK11417630_at 1417631_at 1454119_at21620.6940.1292No
27RPS6KA41438243_at 1448498_at21980.6830.1314No
28NRTN1449281_at22520.6680.1326No
29SOD11435304_at 1440222_at 1440896_at 1451124_at 1459976_s_at22810.6570.1350No
30DUSP91433844_a_at 1433845_x_at 1454737_at23040.6500.1376No
31MAP3K7IP11426898_at 1447692_x_at23060.6500.1411No
32ITGB1BP11422157_a_at 1445697_at24260.6160.1390No
33IRAK1BP11422683_at 1431771_a_at24570.6070.1410No
34MALT11445068_at 1456126_at 1456429_at25830.5760.1384No
35MAP3K71419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at25950.5740.1411No
36GSG21450886_at26570.5610.1413No
37MAPKAPK21426648_at27650.5330.1394No
38MAP3K61449901_a_at27680.5320.1422No
39FAF11418242_at 1434370_s_at27880.5280.1442No
40STAT31424272_at 1426587_a_at 1459961_a_at 1460700_at28710.5130.1433No
41CCL21420380_at28730.5130.1461No
42CFLAR1424996_at 1425686_at 1425687_at 1439600_at 1449317_at29000.5080.1477No
43C5AR11422190_at 1439902_at30420.4800.1438No
44TNFRSF10B1421296_at 1422344_s_at31720.4570.1404No
45PLK21427005_at32340.4450.1401No
46GRM41457299_at34570.4160.1321No
47RHOC1435394_s_at 1448605_at35590.4020.1297No
48RIPK11419508_at 1439273_at 1449485_at35650.4020.1317No
49NMI1425719_a_at37200.3850.1267No
50STK31418512_at 1418513_at 1446289_at 1446627_at 1449114_at38150.3740.1244No
51LTBR1416435_at38280.3730.1259No
52ADRA2A1423022_at 1433600_at 1433601_at38690.3680.1261No
53ADRA1A1421659_at 1459351_at38950.3650.1270No
54RGS31425701_a_at 1427648_at 1449516_a_at 1454026_a_at39720.3570.1254No
55MAPK141416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at40140.3530.1255No
56LITAF1416303_at 1416304_at40660.3480.1251No
57TAOK21438208_at 1443642_at 1456826_at40750.3470.1266No
58IL31RA1445095_at 1451535_at44290.3190.1121No
59TPD52L11418412_at44530.3170.1128No
60PROK21419681_a_at 1426176_a_at 1451952_at45860.3060.1084No
61TLR61421352_at46230.3040.1084No
62STAMBP1416317_a_at 1431962_a_at46790.3000.1075No
63OTUD7B1428953_at 1429139_at 1435552_at 1457716_at47290.2980.1069No
64GHRL1448980_at47780.2950.1063No
65ADAM91416094_at48950.2880.1026No
66SCG21450708_at49400.2850.1021No
67PPP5C1424115_at 1424116_x_at 1451242_a_at51230.2760.0952No
68MAST11432255_at 1449423_at53330.2660.0871No
69TRIM131417888_at53470.2660.0879No
70ADRB31421555_at 1455918_at53710.2640.0883No
71IL201421608_at56590.2510.0765No
72MAP3K91432981_at 1442218_at 1455684_at 1458922_at57330.2470.0745No
73IL12A1425454_a_at62380.2260.0525No
74TNFSF101420412_at 1439680_at 1459913_at62850.2240.0516No
75GOLT1B1449859_at 1460583_at62920.2240.0525No
76DUSP81418714_at63610.2210.0506No
77GADD45B1420197_at 1449773_s_at 1450971_at63730.2200.0513No
78NF21421820_a_at 1427708_a_at 1450382_at 1451829_a_at66750.2090.0386No
79FPR11450808_at67980.2040.0341No
80VAPA1416465_a_at 1416466_at 1448349_at69680.1970.0274No
81DAPK11426915_at 1427358_a_at 1445032_at69900.1970.0275No
82FGFR11424050_s_at 1425911_a_at 1436551_at72130.1890.0183No
83WNK31443924_at74640.1800.0078No
84RPS6KA21417542_at 1417543_at 1441311_at77220.173-0.0031No
85GNG31417428_at78830.168-0.0096No
86SGK21418739_at80280.164-0.0153No
87GADD45G1453851_a_at80450.163-0.0151No
88FGFR31421841_at 1425796_a_at80480.163-0.0143No
89IRAK11448668_a_at 1460649_at81380.160-0.0176No
90AKAP111434764_at81520.160-0.0173No
91WNK41427196_at 1444133_at85100.149-0.0329No
92EDG21417143_at 1426110_a_at 1448606_at86840.144-0.0401No
93FGF21449826_a_at89240.137-0.0504No
94PTEN1422553_at 1441593_at 1444325_at 1450655_at 1454722_at 1455728_at 1457493_at94420.123-0.0735No
95ADRA1B1422183_a_at94860.122-0.0748No
96CASP81424552_at96920.117-0.0837No
97CD811416330_at98950.111-0.0924No
98CASP11449265_at98970.111-0.0918No
99RIPK21421236_at 1450173_at100830.106-0.0997No
100RGS41416286_at 1416287_at 1448285_at101940.103-0.1043No
101SRPK11454042_a_at 1455107_at104170.098-0.1140No
102MAPK8IP21418785_at 1418786_at 1435045_s_at 1449225_a_at 1455194_at104480.097-0.1148No
103TNFSF141421588_at 1450298_at107260.091-0.1271No
104TSPAN61416872_at 1448501_at108360.088-0.1316No
105MAP3K21422250_at108600.087-0.1322No
106PLEKHG51452248_at108620.087-0.1318No
107AMBP1416649_at108690.087-0.1316No
108DAPK21451453_at108700.087-0.1311No
109TDGF11450989_at112100.078-0.1463No
110RPS6KA51431050_at 1437625_at 1439004_at 1440343_at113720.074-0.1533No
111EDA2R1440085_at113810.074-0.1533No
112NEK61451043_at114570.071-0.1563No
113EGF1418093_a_at116610.066-0.1653No
114CARD101449491_at116800.066-0.1658No
115SPRED11423160_at 1423161_s_at 1423162_s_at 1428777_at 1441517_at 1442859_at 1443652_x_at 1445228_at 1452911_at 1460116_s_at118220.062-0.1720No
116MDFI1420713_a_at 1425924_at120450.057-0.1819No
117EDG51428176_at 1447880_x_at120560.056-0.1820No
118TMED41448422_at 1448423_at121790.054-0.1874No
119SRC1423240_at 1450918_s_at127100.041-0.2116No
120MAP3K41421450_a_at 1447667_x_at 1450253_a_at 1459800_s_at128960.036-0.2199No
121CHRNA71440681_at 1450299_at129370.034-0.2216No
122HTR2B1422125_at129750.033-0.2231No
123MYD881419272_at130380.032-0.2258No
124SRPK21417134_at 1417135_at 1417136_s_at 1431372_at 1435746_at 1440080_at 1442241_at 1442980_at 1447755_at 1448603_at131990.027-0.2330No
125MAPK81420931_at 1420932_at 1437045_at 1440856_at 1457936_at132730.025-0.2362No
126CARTPT1422825_at133370.023-0.2390No
127SPRED21423001_at 1434403_at 1436892_at 1441415_at 1441802_at133520.023-0.2395No
128NF11438067_at 1441523_at 1443097_at 1452525_a_at134610.020-0.2444No
129CXXC51431469_a_at 1448960_at135930.016-0.2504No
130MAP3K31426686_s_at 1426687_at 1436522_at137380.011-0.2570No
131SNF1LK1419766_at 1459601_at137910.010-0.2593No
132NLK1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at138680.007-0.2628No
133TRAF71424320_a_at140950.001-0.2732No
134HIPK21424863_a_at 1424864_at 1425983_x_at 1428433_at 1429566_a_at 1432523_at 1446167_at 1448631_a_at 1456022_at 1458520_at14275-0.006-0.2814No
135DUSP41428834_at14511-0.015-0.2922No
136SECTM11419478_at 1419479_at14522-0.015-0.2925No
137NEK111441525_at 1445012_at14618-0.019-0.2968No
138CD241416034_at 1437502_x_at 1448182_a_at14687-0.021-0.2998No
139PLCE11452398_at14701-0.021-0.3003No
140GPS21417796_at14873-0.028-0.3081No
141CD401439221_s_at 1449473_s_at 1460415_a_at14914-0.030-0.3097No
142TRAF61421376_at 1421377_at 1435350_at 1443288_at 1446940_at 1446977_at14986-0.032-0.3128No
143CCR21421186_at 1421187_at 1421188_at 1460067_at15037-0.035-0.3150No
144MAP4K51427083_a_at 1427084_a_at 1427376_a_at 1440059_at 1445426_at 1446348_at 1447204_at15245-0.043-0.3243No
145DAPK31423446_at 1456496_at15356-0.048-0.3291No
146PIK3CB1445731_at 1453069_at15462-0.052-0.3336No
147PTPLAD11433706_a_at 1452427_s_at 1454698_at15650-0.062-0.3419No
148MAPK111421925_at 1421926_at15824-0.071-0.3495No
149FKBP1A1416036_at 1438795_x_at 1438958_x_at 1448184_at 1456196_x_at15844-0.072-0.3500No
150MAP4K31444406_at15870-0.074-0.3507No
151MKNK21418300_a_at 1449029_at15960-0.079-0.3544No
152NDFIP11424820_a_at 1424821_at 1451493_at16046-0.083-0.3579No
153SHC11422853_at 1422854_at16122-0.088-0.3608No
154TRADD1429117_at 1439910_a_at 1452622_a_at16169-0.091-0.3625No
155MBIP1424405_at16243-0.095-0.3653No
156STK38L1435877_at 1435878_at 1455183_at16262-0.097-0.3656No
157GPS11415699_a_at16305-0.100-0.3670No
158MIB21424862_s_at16396-0.106-0.3705No
159CAMKK21424474_a_at 1424475_at 1424476_at 1455401_at16399-0.106-0.3701No
160REL1420710_at16411-0.106-0.3700No
161TNIK1443802_at16450-0.109-0.3711No
162DAXX1419026_at16511-0.113-0.3733No
163MAP3K101436373_at 1440500_at 1457456_at 1458651_at16603-0.120-0.3768No
164FASLG1418803_a_at 1449235_at16829-0.139-0.3864No
165HGS1416540_at16905-0.145-0.3891No
166RHOA1437628_s_at17032-0.156-0.3940No
167MAP3K131430137_at 1440749_at 1447699_at17075-0.162-0.3951No
168TMEM1011451315_at17221-0.176-0.4008No
169MAP2K41426233_at 1442679_at 1451982_at17377-0.194-0.4069No
170ERC11421501_a_at 1424247_at 1441493_at 1444356_at 1451279_at17404-0.198-0.4070No
171MAPK91421876_at 1421877_at 1421878_at17422-0.200-0.4066No
172CHUK1417091_at 1428210_s_at 1451383_a_at17435-0.202-0.4061No
173RPL171423855_x_at 1435791_x_at 1453752_at17511-0.214-0.4084No
174IRAK21436507_at17863-0.261-0.4231No
175PKN11458674_at 1459231_at17970-0.273-0.4265No
176IFNAR21427691_a_at 1440169_x_at 1451462_a_at18111-0.296-0.4313No
177ADRB21437302_at18181-0.306-0.4328No
178TGFA1421942_s_at 1450421_at18291-0.324-0.4361No
179FADD1416888_at 1446499_at18328-0.330-0.4359No
180TICAM11454676_s_at18415-0.342-0.4380No
181MAPK8IP11425679_a_at 1440619_at18454-0.349-0.4378No
182ATP6AP21423662_at 1437688_x_at 1439456_x_at18683-0.392-0.4461No
183STAT41448713_at18698-0.396-0.4446No
184TAOK31435964_a_at 1444366_at 1444881_at 1447257_at 1455733_at18733-0.401-0.4440No
185STAT21421911_at 1450403_at18746-0.403-0.4423No
186HCLS11418842_at18958-0.455-0.4495Yes
187BCL101418970_a_at 1418971_x_at 1418972_at 1443524_x_at18974-0.459-0.4477Yes
188ZDHHC131428307_at 1460048_at19001-0.465-0.4463Yes
189CLCF11437270_a_at 1437271_at 1450262_at19003-0.465-0.4438Yes
190STAT5A1421469_a_at 1450259_a_at19066-0.479-0.4440Yes
191LATS21419678_at 1419679_at 1425420_s_at 1426156_at 1437101_at 1439441_x_at19093-0.486-0.4425Yes
192TRIP61449041_a_at19126-0.495-0.4412Yes
193TBK11422469_at 1445571_at 1460315_s_at19143-0.499-0.4392Yes
194PAK11420979_at 1420980_at 1450070_s_at 1459029_at19199-0.510-0.4389Yes
195MINK11449362_a_at19221-0.515-0.4371Yes
196PINK11441937_s_at 1451148_at19313-0.539-0.4383Yes
197DUSP101417163_at 1417164_at19355-0.548-0.4372Yes
198GPR1771423824_at 1423825_at 1437434_a_at 1458319_at19362-0.550-0.4344Yes
199CXCR41448710_at19371-0.553-0.4317Yes
200DUSP221441723_at 1448985_at19407-0.562-0.4302Yes
201FYB1452117_a_at19433-0.570-0.4282Yes
202OXSR11426933_at19471-0.582-0.4267Yes
203TMEM9B1417874_at 1448867_at19485-0.587-0.4241Yes
204BCL31418133_at19548-0.605-0.4236Yes
205SH2D3C1415886_at19577-0.615-0.4215Yes
206ICK1448310_at 1454243_at 1455687_at19625-0.629-0.4202Yes
207SNF1LK21444472_at 1457276_at19637-0.635-0.4172Yes
208STK41421107_at 1434159_at 1436015_s_at19641-0.635-0.4138Yes
209DBNL1460334_at19671-0.646-0.4116Yes
210TRAF21451233_at19719-0.660-0.4101Yes
211CANT11421476_a_at 1433709_at 1451688_s_at19816-0.694-0.4107Yes
212UBE2N1422559_at 1435384_at19842-0.704-0.4080Yes
213MAP3K111450669_at19870-0.711-0.4053Yes
214MDFIC1427040_at19871-0.711-0.4014Yes
215RELA1419536_a_at20015-0.767-0.4037Yes
216LAX11438687_at20166-0.836-0.4060Yes
217F2R1437308_s_at 1450852_s_at20226-0.856-0.4040Yes
218MAP3K121417115_at 1438908_at 1456565_s_at20297-0.892-0.4023Yes
219TRAF3IP21445985_at 1448508_at20339-0.912-0.3992Yes
220MAP3K7IP21423462_at 1451003_at20343-0.913-0.3943Yes
221STAT5B1422102_a_at 1422103_a_at20380-0.925-0.3908Yes
222IKBKG1421208_at 1421209_s_at 1435646_at 1435647_at 1450161_at 1454690_at20443-0.967-0.3883Yes
223TNFAIP31433699_at 1450829_at20509-1.001-0.3858Yes
224NDFIP21452066_a_at20597-1.054-0.3840Yes
225BIRC21418854_at20613-1.064-0.3788Yes
226DUSP161418401_a_at 1440615_at 1440651_at20653-1.097-0.3745Yes
227FLNA1426677_at20667-1.107-0.3690Yes
228CRKL1421953_at 1421954_at 1425604_at 1436950_at20749-1.171-0.3663Yes
229SOCS61435492_at 1450129_a_at 1452764_at 1459350_at20756-1.179-0.3601Yes
230DUSP21450698_at20824-1.233-0.3563Yes
231CC2D1A1426422_at20916-1.306-0.3533Yes
232IKBKE1417813_at20936-1.328-0.3469Yes
233SLC44A21428065_at 1438559_x_at 1438860_a_at20949-1.347-0.3400Yes
234MADD1425735_at 1455502_at21049-1.476-0.3364Yes
235SCOTIN1423986_a_at 1437503_a_at21114-1.566-0.3307Yes
236STK17B1423452_at 1430165_at 1450997_at21169-1.654-0.3241Yes
237NUP621415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at21173-1.664-0.3150Yes
238TNFRSF1A1417291_at21181-1.673-0.3061Yes
239ADORA2B1434430_s_at 1434431_x_at 1434772_at 1450214_at21210-1.725-0.2978Yes
240SOCS11440047_at 1450446_a_at21256-1.786-0.2901Yes
241DUSP61415834_at21275-1.814-0.2809Yes
242MIER11433755_at 1443400_at 1443879_at 1453760_at21378-1.958-0.2748Yes
243MAP4K21428297_at 1434833_at 1450244_a_at21428-2.057-0.2657Yes
244EDARADD1421213_at 1433132_at 1433133_at 1437800_at21441-2.075-0.2548Yes
245SLC20A11438824_at 1446441_at 1448568_a_at21556-2.311-0.2472Yes
246MAP4K41422615_at 1440609_at 1448050_s_at 1459912_at21597-2.448-0.2356Yes
247MARK21415952_at 1415953_s_at 1435889_at 1444303_at21635-2.604-0.2229Yes
248ADRA2C1422335_at 1435296_at 1439762_x_at 1457328_at21712-2.864-0.2106Yes
249PIAS11422581_at 1446448_at 1455486_at 1455611_at21720-2.886-0.1950Yes
250IFNAR11442222_at 1449026_at21754-3.034-0.1797Yes
251FGF131418497_at 1418498_at21760-3.067-0.1630Yes
252WNK11433676_at 1436746_at 1437888_at 1439970_at21777-3.244-0.1458Yes
253STAT11420915_at 1440481_at 1450033_a_at 1450034_at21782-3.273-0.1280Yes
254STK381416252_at 1431303_at 1439938_at21794-3.368-0.1099Yes
255ZDHHC171434397_at 1447656_at 1455986_at 1458084_at 1458363_at21823-3.480-0.0919Yes
256TFG1415887_at 1438053_at21844-3.640-0.0727Yes
257TEC1441524_at 1460204_at21881-4.130-0.0516Yes
258CCM21434648_a_at 1434649_at 1456290_x_at 1457339_at21902-4.747-0.0263Yes
259RHOH1429319_at 1441385_at 1443015_at21909-5.0370.0012Yes
Table: GSEA details [plain text format]



Fig 2: PROTEIN_KINASE_CASCADE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: PROTEIN_KINASE_CASCADE: Random ES distribution   
Gene set null distribution of ES for PROTEIN_KINASE_CASCADE