Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | NEGATIVE_REGULATION_OF_GROWTH |
| Enrichment Score (ES) | -0.60024196 |
| Normalized Enrichment Score (NES) | -1.5538836 |
| Nominal p-value | 0.014084507 |
| FDR q-value | 0.65097964 |
| FWER p-Value | 1.0 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | TP53 | 1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at | 82 | 3.710 | 0.0839 | No | ||
| 2 | APBB2 | 1426719_at 1426720_at 1440135_at 1446481_at 1452342_at | 365 | 2.326 | 0.1260 | No | ||
| 3 | CDKN1A | 1421679_a_at 1424638_at | 454 | 2.078 | 0.1711 | No | ||
| 4 | ENO1 | 1419023_x_at | 2791 | 0.528 | 0.0769 | No | ||
| 5 | CDKN2A | 1450140_a_at | 2909 | 0.506 | 0.0835 | No | ||
| 6 | NDUFS3 | 1423737_at | 3333 | 0.434 | 0.0744 | No | ||
| 7 | CDA | 1427357_at | 3478 | 0.412 | 0.0776 | No | ||
| 8 | INHBA | 1422053_at 1458291_at | 3952 | 0.360 | 0.0645 | No | ||
| 9 | SMAD3 | 1450471_at 1450472_s_at 1454960_at | 4242 | 0.334 | 0.0592 | No | ||
| 10 | BMP10 | 1421763_at | 5285 | 0.269 | 0.0180 | No | ||
| 11 | APBB1 | 1423892_at 1423893_x_at | 7033 | 0.195 | -0.0572 | No | ||
| 12 | DLC1 | 1436173_at 1450206_at 1458220_at 1460602_at | 10510 | 0.096 | -0.2136 | No | ||
| 13 | TSPYL2 | 1434849_at | 10919 | 0.085 | -0.2302 | No | ||
| 14 | RERG | 1447446_at 1451236_at | 11980 | 0.058 | -0.2772 | No | ||
| 15 | PPP1R9B | 1447247_at 1447486_at | 12818 | 0.037 | -0.3146 | No | ||
| 16 | ACVR1B | 1422098_at 1433725_at | 12962 | 0.033 | -0.3203 | No | ||
| 17 | SERTAD2 | 1417209_at 1444645_at 1454815_at | 13099 | 0.030 | -0.3258 | No | ||
| 18 | ING4 | 1448054_at 1460728_s_at | 16732 | -0.131 | -0.4886 | No | ||
| 19 | RB1 | 1417850_at 1441494_at 1444400_at 1444454_at 1457447_at | 17944 | -0.270 | -0.5375 | No | ||
| 20 | NDUFA13 | 1430713_s_at | 18187 | -0.307 | -0.5413 | No | ||
| 21 | ING5 | 1431134_at 1436069_at 1442094_at 1454235_a_at | 18587 | -0.373 | -0.5507 | No | ||
| 22 | DCBLD2 | 1420526_at 1437635_at 1449891_a_at | 19417 | -0.565 | -0.5752 | No | ||
| 23 | PTCH1 | 1428853_at 1439663_at 1447039_at 1450824_at | 19811 | -0.691 | -0.5768 | No | ||
| 24 | SERTAD3 | 1421076_at 1421077_at | 20326 | -0.906 | -0.5788 | Yes | ||
| 25 | BBC3 | 1423315_at | 20371 | -0.921 | -0.5591 | Yes | ||
| 26 | PML | 1448757_at 1456103_at 1459137_at | 21039 | -1.467 | -0.5549 | Yes | ||
| 27 | IHPK2 | 1428373_at 1435319_at | 21358 | -1.931 | -0.5238 | Yes | ||
| 28 | CDKN2D | 1416253_at | 21412 | -2.020 | -0.4785 | Yes | ||
| 29 | SMAD4 | 1422485_at 1422486_a_at 1422487_at 1444205_at | 21572 | -2.354 | -0.4301 | Yes | ||
| 30 | KLK8 | 1419722_at | 21578 | -2.377 | -0.3742 | Yes | ||
| 31 | BCL6 | 1421818_at 1450381_a_at | 21730 | -2.913 | -0.3123 | Yes | ||
| 32 | PPT1 | 1420015_s_at 1420016_at 1422467_at 1422468_at 1444884_at | 21739 | -2.949 | -0.2430 | Yes | ||
| 33 | CDKN2C | 1416868_at 1439164_at | 21808 | -3.419 | -0.1653 | Yes | ||
| 34 | TGFB1 | 1420653_at 1445360_at | 21829 | -3.528 | -0.0829 | Yes | ||
| 35 | CDKN1B | 1419497_at 1434045_at | 21855 | -3.712 | 0.0037 | Yes |
