Details for gene set V$TEF

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$TEF_Q6
Enrichment Score (ES)	-0.49312025
Normalized Enrichment Score (NES)	-1.6117216
Nominal p-value	0.0
FDR q-value	0.09091818
FWER p-Value	0.412

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DPYSL2	1433770_at 1450502_at 1458188_at 1458632_at	101	3.510	0.0281	No
2	ETV5	1420998_at 1428142_at 1450082_s_at	588	1.801	0.0225	No
3	CCND1	1417419_at 1417420_at 1448698_at	613	1.756	0.0378	No
4	DOCK4	1431114_at 1436405_at 1441462_at 1441469_at 1446283_at 1457146_at 1459279_at	626	1.741	0.0535	No
5	AMD1	1448484_at	652	1.704	0.0682	No
6	SYT6	1420188_at 1426106_a_at 1449766_at 1449767_x_at	664	1.690	0.0835	No
7	UBE2S	1416726_s_at 1430962_at	749	1.585	0.0944	No
8	MRPS18B	1451164_a_at	905	1.403	0.1003	No
9	EMX2	1456258_at	1225	1.131	0.0962	No
10	ITGA1	1439713_at 1446569_at 1455251_at	1440	0.998	0.0957	No
11	EYA1	1421727_at 1443117_at 1457424_at	1863	0.802	0.0838	No
12	TTN	1427445_a_at 1427446_s_at 1431928_at 1444083_at 1444638_at 1446450_at	2065	0.723	0.0813	No
13	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	2273	0.660	0.0779	No
14	LGI1	1423183_at 1435851_at	2575	0.578	0.0695	No
15	LOX	1416121_at 1437903_at 1448228_at	2602	0.573	0.0736	No
16	CRB1	1421451_at 1441330_at	2694	0.550	0.0746	No
17	CACNA1D	1427974_s_at 1428051_a_at	2996	0.489	0.0653	No
18	HOXD12	1450553_at	3120	0.466	0.0640	No
19	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	3151	0.461	0.0669	No
20	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	3261	0.442	0.0660	No
21	FGF12	1440270_at 1451693_a_at 1460137_at	3285	0.439	0.0690	No
22	PSMD3	1448479_at	3314	0.436	0.0718	No
23	RGS3	1425701_a_at 1427648_at 1449516_a_at 1454026_a_at	3972	0.357	0.0450	No
24	GPRC5B	1424613_at 1451411_at	4122	0.343	0.0413	No
25	IGF1	1419519_at 1436497_at 1437401_at 1452014_a_at	4190	0.338	0.0414	No
26	NIN	1419078_at 1444155_at	4208	0.336	0.0437	No
27	RAB5B	1422119_at 1437446_at	4257	0.333	0.0446	No
28	MAB21L2	1418934_at	4272	0.332	0.0471	No
29	OLFML3	1448475_at	4377	0.323	0.0453	No
30	HOXB2	1444204_at 1449397_at	4574	0.307	0.0392	No
31	ERF	1422114_at 1435561_at	4585	0.306	0.0415	No
32	CRYGD	1419141_at	4630	0.304	0.0424	No
33	TOB1	1423176_at 1440844_at	4958	0.284	0.0300	No
34	ATP2A3	1421129_a_at 1450124_a_at	5361	0.265	0.0140	No
35	CREB5	1440089_at 1442576_at 1457222_at	5513	0.258	0.0094	No
36	IL20	1421608_at	5659	0.251	0.0051	No
37	FGF7	1422243_at 1438405_at	5917	0.240	-0.0045	No
38	SPAG4L	1429912_at	6098	0.231	-0.0106	No
39	HOXC4	1422870_at	6294	0.224	-0.0174	No
40	GPC4	1421088_at 1436514_at 1443620_at	6355	0.221	-0.0181	No
41	SALL3	1441186_at 1452386_at	6481	0.217	-0.0219	No
42	COL13A1	1422866_at	6505	0.216	-0.0209	No
43	HOXA11	1420414_at	6530	0.215	-0.0200	No
44	HIVEP2	1422018_at 1434904_at 1444990_at 1457932_at 1459376_at	6635	0.210	-0.0228	No
45	RALGPS2	1417230_at 1428789_at 1431704_a_at	6641	0.210	-0.0211	No
46	MIA2	1451964_at	6793	0.204	-0.0261	No
47	KCNS3	1445519_at 1457799_at	7017	0.196	-0.0346	No
48	BOC	1426869_at 1427516_a_at 1427517_at	7071	0.194	-0.0352	No
49	TWIST1	1418733_at	7102	0.193	-0.0348	No
50	SCNN1G	1419079_at	7545	0.177	-0.0534	No
51	NDST1	1422044_at 1428367_at 1442995_at 1445505_at 1460436_at	7608	0.176	-0.0546	No
52	TITF1	1422346_at	7819	0.169	-0.0627	No
53	SLC39A12	1436611_at 1447248_at	7980	0.165	-0.0685	No
54	MAL2	1427042_at	8226	0.158	-0.0783	No
55	TSGA13	1420587_at	8434	0.151	-0.0864	No
56	PAX8	1418208_at 1446561_at	8713	0.143	-0.0979	No
57	DLX5	1449863_a_at	8805	0.141	-0.1007	No
58	HOXC6	1427361_at 1427362_x_at 1427454_at	8966	0.136	-0.1068	No
59	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	9129	0.132	-0.1130	No
60	NTS	1422860_at	9164	0.131	-0.1134	No
61	MYO15A	1421615_at	9272	0.128	-0.1171	No
62	DNAJC10	1426904_s_at 1426905_a_at 1452230_at	9364	0.125	-0.1201	No
63	HEY1	1415999_at	9574	0.120	-0.1286	No
64	PPP2R2B	1426621_a_at	9589	0.119	-0.1281	No
65	ZFP42	1418362_at	9768	0.115	-0.1352	No
66	HPCAL4	1433987_at	9907	0.111	-0.1405	No
67	CNTN6	1422649_at	10075	0.106	-0.1472	No
68	PTF1A	1419424_at	10081	0.106	-0.1465	No
69	LENG9	1440190_at 1440191_s_at 1455497_at	10192	0.103	-0.1506	No
70	ARRDC3	1454617_at	10217	0.103	-0.1507	No
71	SPRY2	1421656_at 1436584_at	10428	0.098	-0.1594	No
72	DGKI	1439986_at 1442813_at	10880	0.087	-0.1794	No
73	ALDOB	1451194_at	10909	0.086	-0.1799	No
74	NPTX2	1420720_at 1449960_at	11023	0.083	-0.1843	No
75	IGSF4D	1435145_at 1435146_s_at 1435147_x_at 1436743_at 1440412_at 1444664_at 1459761_x_at	11339	0.075	-0.1981	No
76	TRIM8	1418577_at 1427593_at 1438679_at 1460237_at	11495	0.071	-0.2045	No
77	ZIC2	1421301_at	11677	0.066	-0.2122	No
78	SPRED1	1423160_at 1423161_s_at 1423162_s_at 1428777_at 1441517_at 1442859_at 1443652_x_at 1445228_at 1452911_at 1460116_s_at	11822	0.062	-0.2183	No
79	CDH20	1450312_at	11901	0.060	-0.2213	No
80	PRICKLE2	1428808_at	11933	0.059	-0.2222	No
81	TFDP2	1435344_at 1437174_at 1443962_at 1445873_at	12134	0.055	-0.2308	No
82	NFIX	1423493_a_at 1436363_a_at 1436364_x_at 1451443_at 1459909_at	12329	0.050	-0.2393	No
83	ACCN1	1417994_a_at	12332	0.050	-0.2389	No
84	PCDH11X	1446581_at 1459481_at	12647	0.042	-0.2529	No
85	DHX32	1420427_a_at 1438013_x_at	12657	0.042	-0.2530	No
86	CHST7	1449402_at	12968	0.033	-0.2669	No
87	HOXD10	1418606_at	13056	0.031	-0.2706	No
88	ZFHX1B	1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at	13220	0.027	-0.2778	No
89	EBF2	1418494_at 1446128_at 1449101_at 1449102_at	13599	0.016	-0.2951	No
90	ROBO1	1427231_at 1443042_at 1457407_at 1459453_at	13708	0.012	-0.2999	No
91	CUGBP2	1423895_a_at 1440322_at 1441072_at 1443545_at 1444152_at 1444533_at 1445306_at 1446670_at 1450069_a_at 1451154_a_at 1451155_at 1457553_at 1458263_at	13812	0.009	-0.3046	No
92	EN2	1418868_at	13932	0.005	-0.3100	No
93	DPP10	1436087_at 1436661_at 1441853_at 1442491_at 1446514_at 1458091_at	14399	-0.010	-0.3313	No
94	SLC35C2	1420054_s_at 1420055_at 1460731_at	14510	-0.015	-0.3362	No
95	PLN	1423359_at 1450952_at 1460332_at	14593	-0.018	-0.3398	No
96	NRP1	1418084_at 1448943_at 1448944_at 1457198_at	14608	-0.018	-0.3403	No
97	PELO	1434071_a_at	14625	-0.019	-0.3409	No
98	GSH1	1450002_at	14731	-0.022	-0.3455	No
99	BNC2	1438861_at 1440593_at 1459132_at	14743	-0.023	-0.3458	No
100	HOXB8	1452493_s_at	14744	-0.023	-0.3456	No
101	PCBP1	1448642_at	14758	-0.023	-0.3459	No
102	FGF9	1420795_at 1438718_at 1445258_at	14774	-0.024	-0.3464	No
103	ENPEP	1448649_at	14836	-0.027	-0.3490	No
104	KLF12	1439846_at 1439847_s_at 1441040_at 1455521_at	14936	-0.031	-0.3532	No
105	PDLIM3	1443299_at 1449178_at	15176	-0.040	-0.3638	No
106	GPR109A	1419721_at	15206	-0.041	-0.3648	No
107	BUB3	1416815_s_at 1448058_s_at 1448473_at 1459104_at 1459918_at	15208	-0.041	-0.3644	No
108	GBX2	1420337_at	15242	-0.043	-0.3656	No
109	PBX1	1430183_at 1440037_at 1440954_at 1442846_at 1449542_at 1458853_at	15381	-0.049	-0.3714	No
110	ARNT	1419996_s_at 1421721_a_at 1425064_at 1437042_at 1449696_at	15443	-0.052	-0.3738	No
111	CYSLTR1	1418944_at 1449282_at	15526	-0.055	-0.3770	No
112	OTX1	1437601_at	15619	-0.060	-0.3807	No
113	RB1CC1	1418968_at 1431605_at 1449292_at	15632	-0.061	-0.3807	No
114	NDFIP1	1424820_a_at 1424821_at 1451493_at	16046	-0.083	-0.3989	No
115	SLC25A17	1424912_at 1450353_at	16394	-0.106	-0.4138	No
116	ARG2	1418847_at 1438841_s_at	16423	-0.107	-0.4141	No
117	MYST4	1423508_at 1446189_at 1447258_at 1447758_x_at	16608	-0.121	-0.4214	No
118	RIMS1	1435667_at 1438305_at 1444393_at	16610	-0.121	-0.4204	No
119	NCDN	1416852_a_at 1416853_at	16665	-0.125	-0.4217	No
120	AP1GBP1	1435215_at 1442344_at 1457695_at	16803	-0.137	-0.4267	No
121	ITGBL1	1425039_at	17155	-0.169	-0.4413	No
122	PDCD8	1418127_a_at	17311	-0.186	-0.4466	No
123	NTF3	1434802_s_at 1450803_at	17380	-0.195	-0.4480	No
124	PAK1IP1	1423766_at 1430875_a_at	17470	-0.207	-0.4501	No
125	SOX4	1455867_at 1458332_x_at	17504	-0.213	-0.4497	No
126	TAF10	1448784_at	17521	-0.215	-0.4484	No
127	DSCAML1	1427392_at 1427734_a_at 1432196_a_at 1441706_at 1457463_at	17880	-0.262	-0.4624	No
128	ATBF1	1420649_at 1420650_at 1429725_at 1445941_at 1446094_at 1449947_s_at 1453267_at 1460006_at	17910	-0.266	-0.4612	No
129	KCNJ16	1435094_at 1436163_at	17991	-0.276	-0.4623	No
130	TRERF1	1444654_at	18033	-0.283	-0.4616	No
131	NEDD4	1421955_a_at 1444044_at 1450431_a_at 1451109_a_at	18070	-0.288	-0.4606	No
132	LMO7	1455056_at 1458453_at	18126	-0.298	-0.4603	No
133	CAST	1426098_a_at 1435972_at 1451413_at	18153	-0.302	-0.4587	No
134	TBCC	1424644_at 1451423_at	18394	-0.339	-0.4666	No
135	GRM5	1443410_at 1446679_at 1455272_at 1456119_at	18416	-0.342	-0.4643	No
136	SALL2	1416638_at	18479	-0.353	-0.4639	No
137	DDX17	1437773_x_at 1439037_at 1452155_a_at	19116	-0.492	-0.4885	Yes
138	AP1G2	1419113_at	19118	-0.493	-0.4840	Yes
139	TLE4	1425650_at 1430384_at 1450853_at	19164	-0.503	-0.4814	Yes
140	PELI2	1419006_s_at 1436966_at 1437181_at	19171	-0.505	-0.4769	Yes
141	ZFYVE27	1424550_at 1424551_at 1439841_at 1460026_s_at	19342	-0.545	-0.4797	Yes
142	CXCR4	1448710_at	19371	-0.553	-0.4758	Yes
143	CDAN1	1428166_at	19373	-0.553	-0.4707	Yes
144	UNC13D	1428992_at	19794	-0.682	-0.4836	Yes
145	CDYL	1418070_at 1418071_s_at 1448935_at	19813	-0.691	-0.4780	Yes
146	CTCF	1418330_at 1449042_at	19910	-0.726	-0.4756	Yes
147	PURA	1420628_at 1438219_at 1449934_at 1453783_at 1456898_at	20096	-0.802	-0.4767	Yes
148	CBX6	1424407_s_at 1429290_at	20323	-0.905	-0.4786	Yes
149	USP18	1418191_at 1444449_at	20324	-0.905	-0.4702	Yes
150	ABCB7	1419931_at 1427490_at 1435006_s_at	20328	-0.907	-0.4619	Yes
151	ARHGDIB	1426454_at	20514	-1.004	-0.4610	Yes
152	ASB7	1435010_at 1438744_at 1446319_at 1450363_at	20612	-1.062	-0.4556	Yes
153	PHOX2B	1422232_at 1455907_x_at	20640	-1.087	-0.4467	Yes
154	PPP1R10	1426726_at 1426727_s_at 1430560_at	20811	-1.226	-0.4431	Yes
155	FOXP1	1421140_a_at 1421141_a_at 1421142_s_at 1435222_at 1438802_at 1443258_at 1446280_at 1447209_at 1455242_at 1456851_at	20881	-1.284	-0.4343	Yes
156	PRKAG1	1417690_at 1433533_x_at 1457803_at	20924	-1.313	-0.4240	Yes
157	ZBTB9	1429125_at	20995	-1.411	-0.4140	Yes
158	RHOQ	1427918_a_at 1440925_at	21204	-1.717	-0.4076	Yes
159	CSNK1E	1417175_at 1417176_at 1435373_at	21233	-1.757	-0.3925	Yes
160	SLCO3A1	1418030_at 1434537_at 1448918_at	21342	-1.913	-0.3796	Yes
161	IHPK2	1428373_at 1435319_at	21358	-1.931	-0.3623	Yes
162	PRKACB	1420610_at 1420611_at 1457197_at	21429	-2.057	-0.3463	Yes
163	GNPNAT1	1423156_at 1423157_at 1423158_at 1457807_at 1458196_at	21442	-2.077	-0.3275	Yes
164	SPAG9	1430556_at 1433648_at 1437676_at	21485	-2.152	-0.3094	Yes
165	SLC20A1	1438824_at 1446441_at 1448568_a_at	21556	-2.311	-0.2911	Yes
166	FNBP1	1426983_at 1451806_at 1453746_at 1458639_at 1460047_at	21575	-2.371	-0.2698	Yes
167	CRIM1	1426951_at 1442548_at 1452253_at 1458497_at 1459632_at	21577	-2.374	-0.2477	Yes
168	CDC42EP3	1422642_at 1450700_at	21583	-2.394	-0.2256	Yes
169	HIVEP3	1421150_at 1429134_at 1439660_at 1450132_at 1458802_at	21691	-2.804	-0.2044	Yes
170	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	21704	-2.850	-0.1784	Yes
171	NEO1	1423513_at 1434931_at 1440789_at 1444295_at 1447693_s_at 1447694_x_at 1459485_at	21708	-2.853	-0.1519	Yes
172	PUM2	1418015_at 1418016_at 1418017_at 1441448_at	21770	-3.135	-0.1255	Yes
173	IGF1R	1426565_at 1437219_at 1443566_at 1445600_at 1445664_at 1446303_at	21797	-3.373	-0.0953	Yes
174	PDE4B	1422473_at 1422474_at 1442700_at 1444731_at 1445449_at 1446577_at 1447237_at 1447718_at	21810	-3.427	-0.0639	Yes
175	MLL5	1427236_a_at 1432601_at 1434704_at 1439107_a_at 1439108_at	21813	-3.448	-0.0318	Yes
176	EGR2	1427682_a_at 1427683_at	21875	-4.015	0.0028	Yes