Details for gene set V$PR

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$PR_Q2
Enrichment Score (ES)	-0.4920893
Normalized Enrichment Score (NES)	-1.6143036
Nominal p-value	0.0
FDR q-value	0.10037561
FWER p-Value	0.399

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	RWDD1	1427913_at 1430242_at 1454241_at	28	4.836	0.0464	No
2	NOTCH1	1418633_at 1418634_at	470	2.035	0.0461	No
3	MT2A	1428942_at	581	1.809	0.0589	No
4	JDP2	1424972_at 1450350_a_at	725	1.611	0.0682	No
5	PDE4D	1443289_at 1458212_at 1459289_at 1459311_at	815	1.494	0.0788	No
6	MRPS18B	1451164_a_at	905	1.403	0.0886	No
7	NFIL3	1418932_at	907	1.401	0.1023	No
8	CDC42EP4	1416511_a_at 1436801_x_at	1025	1.284	0.1096	No
9	TNNI1	1450813_a_at	1350	1.057	0.1051	No
10	MRPL14	1451307_at	2262	0.664	0.0698	No
11	DLX1	1449470_at	2391	0.625	0.0701	No
12	AHSG	1455093_a_at	2401	0.623	0.0758	No
13	LOX	1416121_at 1437903_at 1448228_at	2602	0.573	0.0722	No
14	SYP	1448280_at 1456249_x_at	2862	0.515	0.0654	No
15	JPH1	1421520_at 1438428_at	2910	0.506	0.0682	No
16	PDHA2	1450962_at	3301	0.437	0.0546	No
17	WNT8B	1421439_at	3491	0.411	0.0500	No
18	EYA2	1424127_at 1445755_at	3659	0.391	0.0462	No
19	RBMS3	1436937_at 1436938_at 1441680_at 1443204_at 1446047_at	3666	0.390	0.0497	No
20	RGS3	1425701_a_at 1427648_at 1449516_a_at 1454026_a_at	3972	0.357	0.0392	No
21	KCNC1	1423559_at 1443855_at 1456944_at	4071	0.347	0.0381	No
22	NR2F1	1418157_at 1422412_x_at	4293	0.331	0.0312	No
23	CDH6	1450288_at	4359	0.324	0.0315	No
24	OBSCN	1443632_at	4407	0.320	0.0324	No
25	RNF128	1418318_at 1449036_at	4565	0.307	0.0283	No
26	KCNK3	1425341_at 1425342_a_at 1426058_a_at	4582	0.306	0.0305	No
27	HMGCS1	1433443_a_at 1433444_at 1433445_x_at 1433446_at 1441536_at	4967	0.284	0.0157	No
28	KCNIP1	1416785_at 1433156_at 1448459_at 1454504_at	4973	0.283	0.0183	No
29	CTGF	1416953_at	5131	0.276	0.0138	No
30	KCNJ1	1418613_at 1418614_at	5242	0.271	0.0114	No
31	OTP	1422285_at	5252	0.270	0.0136	No
32	BMP10	1421763_at	5285	0.269	0.0148	No
33	RHEBL1	1447818_x_at 1451516_at	5481	0.259	0.0084	No
34	FMO1	1417429_at	5516	0.258	0.0094	No
35	ELOVL6	1417403_at 1417404_at 1445062_at 1445578_at 1445641_at	5644	0.252	0.0060	No
36	GRM3	1430136_at	5807	0.244	0.0010	No
37	SRGAP1	1431719_a_at	5984	0.236	-0.0048	No
38	APBA2BP	1431946_a_at 1447907_x_at	6031	0.234	-0.0046	No
39	HMGN2	1433507_a_at	6108	0.230	-0.0058	No
40	PARC	1427620_at 1439866_at	6195	0.228	-0.0075	No
41	CAPN6	1421952_at 1450429_at	6418	0.219	-0.0156	No
42	HFE	1422645_at 1450702_at	6443	0.218	-0.0145	No
43	RAB30	1426452_a_at	6448	0.218	-0.0126	No
44	GIPC2	1417178_at 1457330_at	6468	0.217	-0.0113	No
45	PDZRN4	1456512_at	6634	0.210	-0.0168	No
46	FOXA1	1418496_at	6799	0.204	-0.0224	No
47	ZDHHC22	1459723_at	6819	0.203	-0.0212	No
48	RAB39	1437762_at	7117	0.193	-0.0330	No
49	NR4A3	1421079_at 1421080_at	7465	0.180	-0.0472	No
50	FILIP1	1436650_at 1444075_at	7466	0.180	-0.0454	No
51	IRX4	1419539_at	7634	0.175	-0.0513	No
52	UBE3A	1416680_at 1416681_at 1416682_at 1425206_a_at 1431224_at 1445727_at	7781	0.171	-0.0564	No
53	PDGFRA	1421916_at 1421917_at 1438946_at	7936	0.166	-0.0618	No
54	WNT9A	1425889_at 1436978_at	7937	0.166	-0.0602	No
55	PDC	1449179_at	8383	0.153	-0.0791	No
56	GRIA3	1420563_at 1434728_at	8463	0.151	-0.0813	No
57	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	8574	0.147	-0.0849	No
58	HAPLN2	1420962_at 1420963_at	8641	0.145	-0.0865	No
59	SIX4	1425767_a_at 1427701_a_at 1439753_x_at 1456862_at	9008	0.135	-0.1020	No
60	USP54	1428731_at	9025	0.135	-0.1014	No
61	CAMLG	1417842_at	9252	0.129	-0.1105	No
62	CHST9	1431897_at	9588	0.119	-0.1247	No
63	SEMA3A	1420416_at 1420417_at 1449865_at	9608	0.119	-0.1244	No
64	ONECUT1	1421447_at 1450252_at 1456974_at	9878	0.112	-0.1357	No
65	PRRX1	1425526_a_at 1425527_at 1425528_at 1432129_a_at 1439774_at 1458004_at	9934	0.110	-0.1371	No
66	GABRA1	1421280_at 1421281_at 1436889_at 1455766_at	10074	0.106	-0.1425	No
67	BMPR2	1419616_at 1434310_at 1441652_at	10156	0.104	-0.1452	No
68	CACNA1G	1423365_at	10186	0.104	-0.1455	No
69	LRRTM4	1437214_at 1455937_at	10375	0.099	-0.1531	No
70	CACNA2D2	1426185_at	10424	0.098	-0.1544	No
71	CLDN10	1426147_s_at	10495	0.096	-0.1566	No
72	FCHSD2	1434260_at 1456949_at	10778	0.089	-0.1687	No
73	WNT3	1450763_x_at	10957	0.085	-0.1761	No
74	FGF10	1420690_at	11069	0.081	-0.1804	No
75	SMPX	1418095_at	11331	0.075	-0.1916	No
76	HOXA5	1443803_x_at 1448926_at	11519	0.070	-0.1995	No
77	WWP2	1438482_at 1442162_at 1448145_at 1448146_at 1456714_at 1457499_at	11621	0.067	-0.2035	No
78	SERPINB12	1429297_at 1432173_at	12034	0.057	-0.2219	No
79	GRIN2B	1422223_at 1431700_at	12231	0.053	-0.2304	No
80	GRM2	1431344_at 1435607_at	12354	0.050	-0.2355	No
81	DLX2	1448877_at	12457	0.047	-0.2397	No
82	IL23A	1419529_at	12563	0.044	-0.2441	No
83	SLC15A2	1417600_at 1424730_a_at 1447808_s_at	12872	0.036	-0.2579	No
84	NEXN	1435649_at 1446084_at	12984	0.033	-0.2627	No
85	VGF	1436094_at	13205	0.027	-0.2725	No
86	ZFHX1B	1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at	13220	0.027	-0.2729	No
87	PRDX6	1423223_a_at 1442878_at	13251	0.026	-0.2740	No
88	TNMD	1417979_at	13293	0.025	-0.2757	No
89	WNT2	1449425_at	13527	0.018	-0.2862	No
90	OPTC	1420578_at 1457138_x_at	13535	0.018	-0.2864	No
91	DTNA	1419223_a_at 1425292_at 1426066_a_at 1427588_a_at 1429768_at 1447280_at 1456069_at 1458908_at	13636	0.015	-0.2908	No
92	LEMD1	1445642_at	13761	0.010	-0.2964	No
93	NEK9	1424094_at 1460744_at	13881	0.007	-0.3018	No
94	NNAT	1423506_a_at	13925	0.006	-0.3037	No
95	RGN	1448852_at	14016	0.003	-0.3078	No
96	FGD4	1425037_at 1426041_a_at 1426042_at 1451659_at 1455337_at	14222	-0.004	-0.3172	No
97	BHLHB5	1418271_at	14248	-0.005	-0.3183	No
98	SCD	1415964_at 1415965_at	14304	-0.007	-0.3208	No
99	BDNF	1422168_a_at 1422169_a_at	14354	-0.009	-0.3230	No
100	PAX3	1420389_at 1430335_a_at 1441743_at 1459148_at	14363	-0.009	-0.3232	No
101	IL1RAPL1	1445821_at 1458964_at	14520	-0.015	-0.3303	No
102	IL1A	1421473_at	14597	-0.018	-0.3336	No
103	SCNN1A	1425088_at	14649	-0.020	-0.3357	No
104	CD24	1416034_at 1437502_x_at 1448182_a_at	14687	-0.021	-0.3372	No
105	HOXB8	1452493_s_at	14744	-0.023	-0.3396	No
106	CNTN4	1438782_at 1460321_at	14867	-0.028	-0.3449	No
107	FOXC1	1419485_at 1419486_at	15119	-0.038	-0.3561	No
108	CTDSPL	1422510_at	15209	-0.041	-0.3598	No
109	MAP4K5	1427083_a_at 1427084_a_at 1427376_a_at 1440059_at 1445426_at 1446348_at 1447204_at	15245	-0.043	-0.3609	No
110	GPM6A	1426442_at 1456741_s_at 1459303_at	15313	-0.045	-0.3636	No
111	TYRO3	1425248_a_at 1425249_a_at	15439	-0.051	-0.3688	No
112	OTX1	1437601_at	15619	-0.060	-0.3764	No
113	PANK1	1418715_at 1429813_at 1429814_at 1431028_a_at 1457110_at	16040	-0.083	-0.3949	No
114	RCN1	1417090_at 1447890_at	16318	-0.100	-0.4067	No
115	PPP2R3A	1455198_a_at	16655	-0.125	-0.4209	No
116	NCDN	1416852_a_at 1416853_at	16665	-0.125	-0.4201	No
117	GPM6B	1423091_a_at 1425942_a_at 1453514_at	16837	-0.139	-0.4266	No
118	ZNRF2	1431154_at 1434016_at 1434017_at 1444735_at 1455290_at 1455291_s_at	16923	-0.146	-0.4290	No
119	NARG2	1426536_at 1426537_at	16927	-0.146	-0.4277	No
120	ADCY3	1421959_s_at 1421960_at 1436928_s_at 1436929_x_at 1440405_at 1444641_at	16997	-0.153	-0.4294	No
121	TSGA10	1436045_at 1447283_at	17104	-0.164	-0.4326	No
122	ITGBL1	1425039_at	17155	-0.169	-0.4333	No
123	JMJD1C	1426900_at 1439998_at 1441592_at 1448049_at 1458521_at	17234	-0.178	-0.4351	No
124	POLD4	1427885_at	17568	-0.222	-0.4482	No
125	DTX2	1421720_a_at 1439429_x_at	17707	-0.241	-0.4522	No
126	RAB1B	1424064_at	17730	-0.244	-0.4508	No
127	EPHA2	1421151_a_at	17860	-0.260	-0.4542	No
128	SNAPC1	1429335_at	18025	-0.281	-0.4589	No
129	LBX1	1422323_a_at 1427400_at	18093	-0.292	-0.4591	No
130	SH3BP4	1416305_at 1455250_at	18640	-0.385	-0.4804	No
131	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	18881	-0.435	-0.4872	No
132	STIM1	1436945_x_at 1448320_at 1458460_at	18952	-0.453	-0.4859	No
133	MAP2K1IP1	1416272_at	19087	-0.484	-0.4873	Yes
134	PGM2L1	1438774_s_at 1452841_at 1456478_at	19146	-0.499	-0.4851	Yes
135	TCF12	1421908_a_at 1427670_a_at 1438762_at 1439209_at 1439619_at 1443012_at 1444620_at 1445093_at 1445133_at 1457524_at 1458337_at	19178	-0.507	-0.4815	Yes
136	SHH	1427571_at 1436869_at	19191	-0.509	-0.4770	Yes
137	ZDHHC5	1426310_at 1426311_s_at	19259	-0.523	-0.4750	Yes
138	CPEB4	1420617_at 1420618_at 1449931_at	19289	-0.532	-0.4710	Yes
139	PPP2R2A	1429715_at 1437730_at 1453260_a_at	19364	-0.551	-0.4690	Yes
140	CXCR4	1448710_at	19371	-0.553	-0.4638	Yes
141	ESRRA	1442864_at 1460652_at	19439	-0.573	-0.4613	Yes
142	CD96	1419226_at	19709	-0.657	-0.4672	Yes
143	AMY2A	1457367_at	19820	-0.697	-0.4654	Yes
144	TMEM24	1428095_a_at 1457585_at	19856	-0.709	-0.4600	Yes
145	DGKH	1457213_a_at 1459906_at	19903	-0.723	-0.4550	Yes
146	ATOH7	1422929_s_at 1450796_at	19917	-0.729	-0.4484	Yes
147	BRD4	1424922_a_at 1440078_at 1450711_at 1451870_a_at 1458708_at	19970	-0.749	-0.4434	Yes
148	NUTF2	1434367_s_at 1447440_at 1449017_at	20257	-0.873	-0.4480	Yes
149	TAGAP	1460453_at	20346	-0.914	-0.4430	Yes
150	RAB3C	1432415_at 1432432_a_at 1449494_at	20370	-0.920	-0.4350	Yes
151	CNOT2	1436980_x_at 1445017_at 1447212_at 1454602_s_at 1454603_a_at 1456576_x_at	20391	-0.934	-0.4267	Yes
152	BACE2	1416673_at 1435581_at 1437846_x_at 1438645_x_at	20446	-0.968	-0.4196	Yes
153	CPNE1	1433439_at	20504	-0.998	-0.4124	Yes
154	USP52	1426700_a_at	20588	-1.049	-0.4059	Yes
155	UVRAG	1454706_at	20589	-1.050	-0.3956	Yes
156	H2AFZ	1441370_at	20630	-1.076	-0.3868	Yes
157	MCC	1438081_at 1442741_at 1442892_at 1459524_at 1459752_at	20711	-1.137	-0.3793	Yes
158	PON2	1425791_at 1429019_s_at 1429020_at 1450686_at	20724	-1.147	-0.3685	Yes
159	MXI1	1425732_a_at 1450376_at	20743	-1.165	-0.3579	Yes
160	RGL2	1450688_at	20798	-1.215	-0.3484	Yes
161	PPP1R10	1426726_at 1426727_s_at 1430560_at	20811	-1.226	-0.3368	Yes
162	CACNB3	1448656_at	20888	-1.288	-0.3276	Yes
163	PRKAG1	1417690_at 1433533_x_at 1457803_at	20924	-1.313	-0.3163	Yes
164	SSH2	1456153_at	20941	-1.337	-0.3039	Yes
165	ZBTB9	1429125_at	20995	-1.411	-0.2924	Yes
166	HIVEP1	1422742_at	21000	-1.418	-0.2786	Yes
167	GRAP	1429387_at	21185	-1.677	-0.2706	Yes
168	RERE	1454670_at	21216	-1.730	-0.2549	Yes
169	ELMO1	1424523_at 1446610_at 1450208_a_at	21343	-1.914	-0.2418	Yes
170	KLF3	1421604_a_at 1429360_at 1431630_a_at 1441200_at 1442920_at 1454666_at	21371	-1.949	-0.2239	Yes
171	PRG2	1422873_at	21399	-2.000	-0.2054	Yes
172	TCN2	1441850_x_at 1444110_at 1447800_x_at 1447842_x_at 1448200_at 1457825_x_at	21418	-2.030	-0.1862	Yes
173	BCL9	1445859_at 1446767_at 1451574_at 1455565_at	21515	-2.210	-0.1689	Yes
174	CXCL14	1418456_a_at 1418457_at	21540	-2.270	-0.1476	Yes
175	PACS1	1420112_at 1435762_at 1440014_at 1449737_at 1459707_at	21541	-2.271	-0.1252	Yes
176	SESN3	1449303_at 1453313_at	21626	-2.567	-0.1038	Yes
177	RAP2B	1417914_at 1417915_at 1439548_at 1448885_at	21641	-2.629	-0.0785	Yes
178	SSBP2	1429951_at 1438423_at 1449815_a_at 1451542_at	21680	-2.763	-0.0531	Yes
179	LTBP3	1418049_at 1437833_at 1438312_s_at 1456189_x_at	21711	-2.859	-0.0263	Yes
180	CDKN1B	1419497_at 1434045_at	21855	-3.712	0.0037	Yes