Details for gene set V$NFKB_Q6

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$NFKB_Q6_01
Enrichment Score (ES)	-0.48265973
Normalized Enrichment Score (NES)	-1.5730639
Nominal p-value	0.0
FDR q-value	0.103992686
FWER p-Value	0.559

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	UBE2D3	1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at	44	4.350	0.0337	No
2	TP53	1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at	82	3.710	0.0625	No
3	IL2RA	1420691_at 1420692_at	137	3.241	0.0867	No
4	ARHGAP8	1451463_at	186	2.993	0.1091	No
5	CLCN1	1427591_at 1448082_at	373	2.299	0.1195	No
6	SOCS2	1418507_s_at 1438470_at 1441476_at 1442586_at 1446085_at 1449109_at	539	1.886	0.1274	No
7	FGF17	1421523_at 1456239_at	732	1.602	0.1317	No
8	UNC84B	1433832_at 1439238_at	970	1.332	0.1318	No
9	ENO3	1417951_at 1449631_at	1128	1.196	0.1344	No
10	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	1192	1.150	0.1410	No
11	UACA	1452985_at	1434	1.002	0.1381	No
12	SP6	1427786_at 1427787_at 1437788_at 1442342_at	1679	0.888	0.1342	No
13	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	1888	0.793	0.1312	No
14	ALG6	1439007_at 1459337_at	2060	0.725	0.1293	No
15	TCEA2	1418107_at 1440791_x_at	2156	0.696	0.1307	No
16	COL27A1	1429549_at 1453191_at	2549	0.585	0.1175	No
17	NDRG2	1448154_at	2618	0.569	0.1190	No
18	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	3151	0.461	0.0984	No
19	TRIM47	1426784_at	3292	0.438	0.0955	No
20	TGIF	1422286_a_at	3545	0.405	0.0873	No
21	GRIN2D	1421393_at	3704	0.386	0.0832	No
22	SMPD3	1422779_at 1438665_at 1445759_at 1450748_at	3898	0.365	0.0773	No
23	TBX20	1422219_a_at 1425158_at 1453351_at	4211	0.336	0.0658	No
24	NR3C1	1421866_at 1421867_at 1453860_s_at 1457635_s_at 1460303_at	4355	0.324	0.0618	No
25	BCL6B	1418421_at	4479	0.314	0.0588	No
26	PTGES	1439747_at 1449449_at 1449450_at	4532	0.309	0.0589	No
27	PTHLH	1422324_a_at 1427527_a_at	4548	0.309	0.0608	No
28	HSD3B7	1416968_a_at 1442912_at	4627	0.304	0.0597	No
29	ASCL3	1420780_at	4754	0.296	0.0563	No
30	CSF3	1419427_at	5026	0.281	0.0462	No
31	SLC6A12	1449382_at	5267	0.270	0.0374	No
32	BLR1	1422003_at	5357	0.266	0.0355	No
33	EDN2	1449161_at	5896	0.241	0.0128	No
34	GREM1	1425357_a_at	5906	0.240	0.0143	No
35	IL12A	1425454_a_at	6238	0.226	0.0010	No
36	FUT7	1420756_at	6262	0.225	0.0018	No
37	GADD45B	1420197_at 1449773_s_at 1450971_at	6373	0.220	-0.0015	No
38	IL7	1422080_at 1436861_at	6655	0.210	-0.0127	No
39	GATA4	1418863_at 1418864_at 1441364_at	6725	0.207	-0.0141	No
40	RBMS1	1418703_at 1434005_at 1441437_at 1458578_at 1459968_at	6830	0.202	-0.0173	No
41	CNTNAP1	1421580_at	6931	0.199	-0.0202	No
42	BAI2	1435558_at	6987	0.197	-0.0211	No
43	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	7174	0.191	-0.0281	No
44	ZIC4	1421539_at 1456417_at	7355	0.184	-0.0349	No
45	MOBKL2C	1440919_at 1459919_a_at	7548	0.177	-0.0422	No
46	TCF1	1421234_at	7701	0.173	-0.0478	No
47	C1QL1	1422777_at	7959	0.165	-0.0582	No
48	CYLD	1429617_at 1429618_at 1445213_at	8441	0.151	-0.0791	No
49	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	8574	0.147	-0.0839	No
50	POU2F3	1450507_at	8616	0.146	-0.0846	No
51	HTR3B	1421652_at	8709	0.143	-0.0877	No
52	KLK9	1431681_at	8929	0.137	-0.0966	No
53	TNFRSF1B	1418099_at 1448951_at	9094	0.133	-0.1030	No
54	SHOX2	1420559_a_at 1438042_at	9623	0.118	-0.1263	No
55	IL13	1420802_at	9638	0.118	-0.1260	No
56	KRTAP13-1	1428007_at	9675	0.117	-0.1267	No
57	TNFSF7	1449926_at	9815	0.113	-0.1322	No
58	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	9984	0.109	-0.1390	No
59	WNT10A	1460657_at	10261	0.101	-0.1508	No
60	VCAM1	1415989_at 1436003_at 1448162_at 1451314_a_at	10324	0.100	-0.1529	No
61	CENTB5	1439021_at	10544	0.095	-0.1621	No
62	ETV1	1422607_at 1445314_at 1450684_at	10549	0.095	-0.1615	No
63	NFKBIB	1421266_s_at 1446718_at	10653	0.092	-0.1655	No
64	MADCAM1	1425253_a_at	10736	0.091	-0.1685	No
65	NTN1	1422987_at 1454974_at	10792	0.089	-0.1703	No
66	ERN1	1421240_at 1431886_at 1437119_at 1438583_at 1438997_at 1450176_at	10868	0.087	-0.1731	No
67	EBI3	1449222_at	10872	0.087	-0.1725	No
68	DGKI	1439986_at 1442813_at	10880	0.087	-0.1721	No
69	NEK8	1450337_a_at 1458157_at	11555	0.069	-0.2025	No
70	EGF	1418093_a_at	11661	0.066	-0.2068	No
71	PCSK2	1428305_at 1444147_at 1447991_at 1447992_s_at 1448312_at	11732	0.065	-0.2095	No
72	TSLP	1450004_at	11738	0.064	-0.2092	No
73	EDG5	1428176_at 1447880_x_at	12056	0.056	-0.2233	No
74	MSC	1418417_at	12098	0.055	-0.2247	No
75	JAK3	1425750_a_at 1446515_at	12394	0.049	-0.2378	No
76	IL23A	1419529_at	12563	0.044	-0.2452	No
77	RND1	1455197_at	12719	0.040	-0.2520	No
78	IL1RN	1423017_a_at 1425663_at 1451798_at	12855	0.036	-0.2579	No
79	DCAMKL1	1423125_at 1424270_at 1424271_at 1436659_at 1446190_at 1450863_a_at 1451289_at 1451917_a_at	12985	0.033	-0.2635	No
80	DDR1	1415797_at 1415798_at 1435820_x_at 1437619_x_at 1438367_x_at 1439382_x_at 1456226_x_at 1459990_at	13018	0.032	-0.2647	No
81	AMOTL1	1428785_at 1431121_at 1446909_at 1455247_at	13113	0.030	-0.2688	No
82	RALGDS	1460634_at	13130	0.029	-0.2693	No
83	GNG4	1417943_at 1417944_at 1447669_s_at	13278	0.025	-0.2759	No
84	PAPPA	1427633_a_at 1432591_at 1432592_at 1459375_at	13332	0.023	-0.2781	No
85	MSX1	1417127_at 1448601_s_at	13793	0.010	-0.2992	No
86	RIN2	1426368_at 1441209_at 1442829_at	13848	0.008	-0.3016	No
87	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	13868	0.007	-0.3024	No
88	BDNF	1422168_a_at 1422169_a_at	14354	-0.009	-0.3246	No
89	DAP3	1450848_at	14398	-0.010	-0.3265	No
90	GRK5	1446361_at 1446998_at 1449514_at	14402	-0.010	-0.3265	No
91	MAG	1460219_at	14612	-0.018	-0.3360	No
92	TRIB2	1426640_s_at 1426641_at 1459852_x_at	14645	-0.019	-0.3373	No
93	MAML2	1446570_at 1447546_s_at	14777	-0.024	-0.3431	No
94	SNAP25	1416828_at 1443398_at	14797	-0.025	-0.3438	No
95	PTPRJ	1425587_a_at 1425588_at 1427602_at 1427629_at 1443683_at 1455030_at	15250	-0.043	-0.3642	No
96	UPF2	1435030_at 1445777_at	15401	-0.050	-0.3707	No
97	BATF	1419410_at	15806	-0.070	-0.3887	No
98	IFNB1	1422305_at	16331	-0.101	-0.4119	No
99	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	17098	-0.163	-0.4458	No
100	ASH1L	1420985_at 1441117_at 1450071_at 1450072_at	17250	-0.179	-0.4512	No
101	UBD	1419762_at	17254	-0.180	-0.4499	No
102	MITF	1422025_at 1455214_at	17279	-0.183	-0.4495	No
103	GNB1	1417432_a_at 1425908_at 1454696_at 1459442_at	17559	-0.220	-0.4605	No
104	MMP9	1416298_at 1448291_at	17610	-0.228	-0.4609	No
105	ZBTB11	1454826_at	17648	-0.232	-0.4607	No
106	CHD4	1436343_at 1438476_a_at 1451295_a_at	17650	-0.232	-0.4588	No
107	RASGRP4	1425380_at	17686	-0.238	-0.4585	No
108	RAP2C	1428119_a_at 1437016_x_at 1460430_at	17754	-0.246	-0.4596	No
109	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	17835	-0.256	-0.4611	No
110	IER5	1417612_at 1417613_at	17869	-0.262	-0.4605	No
111	NFKB2	1425902_a_at 1429128_x_at	17945	-0.270	-0.4617	No
112	IL4I1	1419192_at	17947	-0.271	-0.4595	No
113	CREB1	1421582_a_at 1421583_at 1423402_at 1428755_at 1452529_a_at 1452901_at	18053	-0.285	-0.4620	No
114	PFN1	1449018_at	18085	-0.291	-0.4610	No
115	ICAM1	1424067_at	18113	-0.296	-0.4598	No
116	SLAMF8	1425294_at	18183	-0.306	-0.4605	No
117	FGF1	1423136_at 1441042_at 1450869_at	18353	-0.334	-0.4655	No
118	EIF5A	1437859_x_at 1451470_s_at	18391	-0.339	-0.4644	No
119	RHOG	1422572_at	18397	-0.339	-0.4619	No
120	SIRT2	1423507_a_at	18399	-0.340	-0.4591	No
121	CHD6	1427384_at 1431047_at	18673	-0.391	-0.4685	No
122	BMP2K	1421103_at 1437419_at 1458370_at	18776	-0.413	-0.4697	No
123	ACTN1	1427385_s_at 1428585_at 1452415_at	18819	-0.422	-0.4682	No
124	XPO6	1422759_a_at 1440492_at 1443737_at	18894	-0.439	-0.4680	No
125	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	19006	-0.466	-0.4693	No
126	ILK	1449942_a_at	19063	-0.478	-0.4679	No
127	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	19385	-0.557	-0.4781	Yes
128	DUSP22	1441723_at 1448985_at	19407	-0.562	-0.4744	Yes
129	BCL3	1418133_at	19548	-0.605	-0.4759	Yes
130	LTA	1420353_at	19620	-0.625	-0.4740	Yes
131	REV3L	1424632_a_at 1426194_x_at 1451960_a_at	19727	-0.665	-0.4734	Yes
132	STAT6	1421708_a_at 1426353_at	19810	-0.691	-0.4715	Yes
133	MAP3K11	1450669_at	19870	-0.711	-0.4684	Yes
134	SEMA3B	1416644_a_at 1431795_a_at 1448415_a_at	19906	-0.723	-0.4640	Yes
135	MRPS6	1424440_at 1447585_s_at	19997	-0.760	-0.4619	Yes
136	RBPSUH	1418114_at 1438848_at 1446436_at 1448957_at 1454896_at	20177	-0.841	-0.4632	Yes
137	EP300	1434765_at	20230	-0.858	-0.4586	Yes
138	TNFRSF9	1421481_at 1428034_a_at 1460469_at	20532	-1.015	-0.4640	Yes
139	IL27RA	1449508_at	20554	-1.028	-0.4566	Yes
140	USP52	1426700_a_at	20588	-1.049	-0.4494	Yes
141	PHOX2B	1422232_at 1455907_x_at	20640	-1.087	-0.4428	Yes
142	SEC61A1	1416189_a_at 1416190_a_at 1416191_at 1434986_a_at 1448242_at 1455987_at	20665	-1.106	-0.4349	Yes
143	RFX5	1423103_at	20736	-1.160	-0.4285	Yes
144	IL6ST	1421239_at 1437303_at 1452843_at 1460295_s_at	20747	-1.168	-0.4194	Yes
145	RELB	1417856_at	20776	-1.198	-0.4108	Yes
146	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	20820	-1.232	-0.4027	Yes
147	TNIP1	1427689_a_at	20959	-1.367	-0.3978	Yes
148	ZBTB9	1429125_at	20995	-1.411	-0.3878	Yes
149	HIVEP1	1422742_at	21000	-1.418	-0.3763	Yes
150	BMF	1422995_at 1454880_s_at 1458325_x_at	21130	-1.593	-0.3691	Yes
151	CCL5	1418126_at	21135	-1.602	-0.3562	Yes
152	DUSP6	1415834_at	21275	-1.814	-0.3476	Yes
153	ATP1B1	1418453_a_at 1423890_x_at 1439036_a_at 1451152_a_at 1455949_at	21286	-1.823	-0.3331	Yes
154	ELMO1	1424523_at 1446610_at 1450208_a_at	21343	-1.914	-0.3200	Yes
155	MAP4K2	1428297_at 1434833_at 1450244_a_at	21428	-2.057	-0.3069	Yes
156	SMOC1	1448321_at	21462	-2.111	-0.2911	Yes
157	CD69	1428735_at	21470	-2.122	-0.2739	Yes
158	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	21477	-2.135	-0.2567	Yes
159	RASSF2	1428392_at 1444889_at	21479	-2.138	-0.2391	Yes
160	GPHN	1426462_at 1426463_at 1430038_at 1444869_at 1445188_at 1458242_at	21481	-2.140	-0.2216	Yes
161	PRKCD	1422847_a_at 1442256_at	21582	-2.392	-0.2065	Yes
162	PPP1R13B	1434895_s_at 1442956_at 1459224_at	21615	-2.535	-0.1871	Yes
163	BAZ2B	1435240_at 1440984_at 1441556_at 1442704_at 1442971_at 1445048_at 1448007_at 1458077_at	21625	-2.560	-0.1665	Yes
164	UBE2I	1422712_a_at 1422713_a_at 1425478_x_at 1453189_at	21684	-2.784	-0.1463	Yes
165	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	21704	-2.850	-0.1237	Yes
166	TRAF4	1416571_at 1460642_at	21718	-2.874	-0.1007	Yes
167	LTB	1419135_at	21722	-2.890	-0.0771	Yes
168	ZNRF1	1420949_at 1420950_at 1424384_a_at	21779	-3.246	-0.0530	Yes
169	FBXL12	1448420_a_at	21843	-3.636	-0.0260	Yes
170	BIRC3	1421392_a_at 1425223_at	21850	-3.673	0.0040	Yes