Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
Upregulated in class | ATM_plus |
GeneSet | V$MYB_Q5_01 |
Enrichment Score (ES) | -0.4493799 |
Normalized Enrichment Score (NES) | -1.4755319 |
Nominal p-value | 0.001984127 |
FDR q-value | 0.1708071 |
FWER p-Value | 0.908 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | PSMA1 | 1415695_at 1436769_at 1436770_x_at 1458292_at | 10 | 5.918 | 0.0479 | No | ||
2 | XPO1 | 1418442_at 1418443_at 1448070_at | 128 | 3.276 | 0.0692 | No | ||
3 | CEBPB | 1418901_at 1427844_a_at | 344 | 2.380 | 0.0788 | No | ||
4 | SFRS2 | 1415807_s_at 1427504_s_at 1427816_at 1452439_s_at | 428 | 2.140 | 0.0925 | No | ||
5 | PREB | 1416502_a_at 1455667_at 1456037_x_at | 575 | 1.817 | 0.1006 | No | ||
6 | SHMT1 | 1422198_a_at 1425177_at 1425178_s_at 1425179_at | 583 | 1.808 | 0.1150 | No | ||
7 | LNPEP | 1433747_at 1438432_at 1439326_at 1443907_at 1456347_at | 696 | 1.651 | 0.1234 | No | ||
8 | NFIL3 | 1418932_at | 907 | 1.401 | 0.1252 | No | ||
9 | CANX | 1415692_s_at 1422845_at 1428935_at | 926 | 1.381 | 0.1356 | No | ||
10 | WNT5A | 1436791_at 1448818_at 1456976_at | 1162 | 1.172 | 0.1344 | No | ||
11 | TNNI1 | 1450813_a_at | 1350 | 1.057 | 0.1344 | No | ||
12 | KIF20A | 1449207_a_at | 1560 | 0.939 | 0.1325 | No | ||
13 | ZNF462 | 1439106_at 1456789_at | 1588 | 0.925 | 0.1388 | No | ||
14 | NDUFC1 | 1416285_at 1448284_a_at | 1678 | 0.889 | 0.1420 | No | ||
15 | ALDOA | 1416921_x_at 1433604_x_at 1434799_x_at | 1722 | 0.867 | 0.1471 | No | ||
16 | ARHGAP12 | 1431052_at 1444463_at 1451525_at 1451526_at | 1735 | 0.859 | 0.1535 | No | ||
17 | ADAM2 | 1460374_at | 1924 | 0.777 | 0.1513 | No | ||
18 | PGM1 | 1446824_at 1453283_at | 1950 | 0.764 | 0.1563 | No | ||
19 | RAPSN | 1449331_a_at | 2136 | 0.703 | 0.1536 | No | ||
20 | RPL4 | 1425183_a_at | 2216 | 0.678 | 0.1555 | No | ||
21 | SLC6A9 | 1417636_at 1431812_a_at | 2244 | 0.670 | 0.1597 | No | ||
22 | AK2 | 1448450_at 1448451_at | 2274 | 0.659 | 0.1638 | No | ||
23 | COMMD3 | 1433539_at 1454642_a_at | 2563 | 0.580 | 0.1553 | No | ||
24 | USP5 | 1448311_at | 2859 | 0.515 | 0.1459 | No | ||
25 | IGSF4 | 1417376_a_at 1417377_at 1417378_at 1431611_a_at | 3151 | 0.461 | 0.1363 | No | ||
26 | FGF12 | 1440270_at 1451693_a_at 1460137_at | 3285 | 0.439 | 0.1338 | No | ||
27 | ING3 | 1422805_a_at 1422806_x_at 1450760_a_at 1460082_at | 3396 | 0.424 | 0.1322 | No | ||
28 | CPNE6 | 1449921_s_at | 3398 | 0.424 | 0.1356 | No | ||
29 | RHOC | 1435394_s_at 1448605_at | 3559 | 0.402 | 0.1315 | No | ||
30 | FRAS1 | 1439019_at 1440765_at 1445058_at 1459093_at | 3730 | 0.384 | 0.1269 | No | ||
31 | SPOCK2 | 1435026_at 1447443_at 1450451_at 1457430_at 1458360_at | 3808 | 0.374 | 0.1264 | No | ||
32 | HES6 | 1436050_x_at 1452021_a_at | 3834 | 0.372 | 0.1283 | No | ||
33 | NMUR1 | 1421667_at | 4029 | 0.351 | 0.1222 | No | ||
34 | FMOD | 1415939_at 1437324_x_at 1437685_x_at 1437718_x_at 1438966_x_at 1456084_x_at | 4149 | 0.341 | 0.1195 | No | ||
35 | NR2F1 | 1418157_at 1422412_x_at | 4293 | 0.331 | 0.1157 | No | ||
36 | ARHGEF6 | 1429012_at 1442292_at | 4301 | 0.330 | 0.1180 | No | ||
37 | CAPN11 | 1445698_at | 4319 | 0.329 | 0.1199 | No | ||
38 | PCSK1N | 1416965_at | 4505 | 0.312 | 0.1140 | No | ||
39 | PRICKLE1 | 1441663_at 1442172_at 1442400_at 1444759_at 1452249_at 1457637_at | 4681 | 0.300 | 0.1084 | No | ||
40 | ANKRD17 | 1415726_at 1421220_at 1436775_a_at 1444608_at 1445826_at 1454763_at 1459952_at | 4693 | 0.300 | 0.1103 | No | ||
41 | PDE3B | 1433694_at | 4879 | 0.289 | 0.1042 | No | ||
42 | HHEX | 1423319_at | 4965 | 0.284 | 0.1026 | No | ||
43 | PRR3 | 1424145_at | 5014 | 0.282 | 0.1027 | No | ||
44 | PNOC | 1425892_a_at | 5384 | 0.264 | 0.0879 | No | ||
45 | CREB5 | 1440089_at 1442576_at 1457222_at | 5513 | 0.258 | 0.0841 | No | ||
46 | RIN1 | 1424507_at 1437460_x_at | 5562 | 0.256 | 0.0840 | No | ||
47 | P2RY2 | 1450318_a_at | 5604 | 0.254 | 0.0842 | No | ||
48 | GUCA2B | 1460233_at | 5750 | 0.246 | 0.0795 | No | ||
49 | GNAS | 1421740_at 1427789_s_at 1443007_at 1443375_at 1444767_at 1450186_s_at 1453413_at | 6342 | 0.222 | 0.0542 | No | ||
50 | RFX4 | 1432053_at 1436931_at 1443312_at | 6469 | 0.217 | 0.0502 | No | ||
51 | DSCAM | 1419293_at 1431801_at 1441082_at 1449411_at | 6491 | 0.216 | 0.0510 | No | ||
52 | VAPA | 1416465_a_at 1416466_at 1448349_at | 6968 | 0.197 | 0.0307 | No | ||
53 | ORMDL2 | 1424235_at | 6974 | 0.197 | 0.0321 | No | ||
54 | GNAT1 | 1460212_at | 7297 | 0.186 | 0.0188 | No | ||
55 | DMN | 1455610_at 1457275_at | 7414 | 0.182 | 0.0150 | No | ||
56 | DOCK1 | 1443390_at 1443760_at 1443991_at 1452220_at 1457806_at | 7467 | 0.180 | 0.0140 | No | ||
57 | NEDD8 | 1423715_a_at 1440996_at 1445811_at | 7532 | 0.178 | 0.0126 | No | ||
58 | PNMA1 | 1429224_at | 7758 | 0.171 | 0.0036 | No | ||
59 | UBE3A | 1416680_at 1416681_at 1416682_at 1425206_a_at 1431224_at 1445727_at | 7781 | 0.171 | 0.0040 | No | ||
60 | PLA2G6 | 1422147_a_at 1431278_s_at | 7786 | 0.171 | 0.0052 | No | ||
61 | GNG3 | 1417428_at | 7883 | 0.168 | 0.0022 | No | ||
62 | FIGN | 1450268_at | 8081 | 0.162 | -0.0056 | No | ||
63 | SEMA6D | 1446536_at 1448060_at 1453055_at 1459318_at | 8219 | 0.158 | -0.0106 | No | ||
64 | NR3C2 | 1435991_at 1440306_at 1442533_at | 8511 | 0.149 | -0.0227 | No | ||
65 | SOX5 | 1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at | 8574 | 0.147 | -0.0244 | No | ||
66 | SRGAP2 | 1427967_at 1429884_at 1434406_at 1434407_at | 8784 | 0.141 | -0.0328 | No | ||
67 | HOXB3 | 1427605_at 1456229_at | 8898 | 0.138 | -0.0369 | No | ||
68 | FST | 1421365_at 1434458_at | 8983 | 0.135 | -0.0396 | No | ||
69 | SIX4 | 1425767_a_at 1427701_a_at 1439753_x_at 1456862_at | 9008 | 0.135 | -0.0396 | No | ||
70 | ETV4 | 1423232_at 1443381_at | 9279 | 0.128 | -0.0510 | No | ||
71 | HNRPF | 1450963_at | 9383 | 0.125 | -0.0547 | No | ||
72 | B3GALT2 | 1423084_at 1437433_at 1437644_at | 9416 | 0.124 | -0.0552 | No | ||
73 | MYOZ2 | 1418769_at | 9558 | 0.120 | -0.0607 | No | ||
74 | LRFN5 | 1441502_at 1454687_at | 9593 | 0.119 | -0.0613 | No | ||
75 | ESRRG | 1421747_at 1455267_at 1457896_at | 9650 | 0.118 | -0.0629 | No | ||
76 | HTR2C | 1435513_at 1450477_at | 9728 | 0.116 | -0.0655 | No | ||
77 | ONECUT1 | 1421447_at 1450252_at 1456974_at | 9878 | 0.112 | -0.0714 | No | ||
78 | OCRL | 1438284_at 1438396_at 1457313_at | 9913 | 0.111 | -0.0721 | No | ||
79 | ZBTB26 | 1434629_at 1447721_at | 9961 | 0.109 | -0.0733 | No | ||
80 | MAMDC1 | 1442206_at 1442561_at 1445372_at 1458147_at | 10053 | 0.107 | -0.0767 | No | ||
81 | PRKCBP1 | 1426614_at 1429415_at 1445827_at 1456143_at 1458617_at | 10058 | 0.107 | -0.0760 | No | ||
82 | ZSWIM2 | 1429751_at 1432201_a_at | 10312 | 0.100 | -0.0868 | No | ||
83 | ADAMTS3 | 1441693_at 1458143_at | 10366 | 0.099 | -0.0884 | No | ||
84 | MGLL | 1426785_s_at 1431331_at 1450391_a_at 1453836_a_at | 10620 | 0.093 | -0.0993 | No | ||
85 | LEP | 1422582_at | 10942 | 0.085 | -0.1133 | No | ||
86 | WNT3 | 1450763_x_at | 10957 | 0.085 | -0.1133 | No | ||
87 | HCN1 | 1450193_at | 11048 | 0.082 | -0.1168 | No | ||
88 | LHX6 | 1422262_a_at 1425094_a_at | 11208 | 0.078 | -0.1234 | No | ||
89 | ABHD2 | 1418661_at 1440447_at | 11320 | 0.075 | -0.1279 | No | ||
90 | NRG1 | 1456524_at | 11471 | 0.071 | -0.1342 | No | ||
91 | CDH20 | 1450312_at | 11901 | 0.060 | -0.1535 | No | ||
92 | HRH4 | 1426099_at | 11986 | 0.058 | -0.1568 | No | ||
93 | PLXNC1 | 1423213_at 1423214_at 1443433_at 1443434_s_at 1450905_at 1450906_at | 12033 | 0.057 | -0.1585 | No | ||
94 | ODF4 | 1424978_at | 12277 | 0.051 | -0.1692 | No | ||
95 | ACCN1 | 1417994_a_at | 12332 | 0.050 | -0.1713 | No | ||
96 | DLX2 | 1448877_at | 12457 | 0.047 | -0.1766 | No | ||
97 | TMEM27 | 1435064_a_at | 12527 | 0.045 | -0.1794 | No | ||
98 | OMG | 1418212_at | 12769 | 0.039 | -0.1902 | No | ||
99 | RHOBTB3 | 1429661_at 1433647_s_at 1447869_x_at 1453227_at 1457009_at | 12973 | 0.033 | -0.1992 | No | ||
100 | XPO7 | 1415682_at 1435814_at 1439411_a_at 1442836_at 1446826_at | 13172 | 0.028 | -0.2081 | No | ||
101 | PPARGC1B | 1438775_at 1449945_at 1457578_at | 13224 | 0.027 | -0.2102 | No | ||
102 | MYO18B | 1431813_at | 13228 | 0.026 | -0.2102 | No | ||
103 | SLC16A6 | 1417884_at | 13601 | 0.016 | -0.2271 | No | ||
104 | DMD | 1417307_at 1430320_at 1446156_at 1448665_at 1457022_at | 13998 | 0.004 | -0.2453 | No | ||
105 | NR6A1 | 1421515_at 1421516_at 1428825_at 1428826_at 1445872_at | 14041 | 0.002 | -0.2472 | No | ||
106 | BHLHB5 | 1418271_at | 14248 | -0.005 | -0.2566 | No | ||
107 | BDNF | 1422168_a_at 1422169_a_at | 14354 | -0.009 | -0.2614 | No | ||
108 | GRK5 | 1446361_at 1446998_at 1449514_at | 14402 | -0.010 | -0.2635 | No | ||
109 | PCDH9 | 1439322_at 1442659_at 1444215_at 1444724_at 1445052_at 1445061_at 1457973_at | 14537 | -0.016 | -0.2695 | No | ||
110 | CLDN8 | 1449091_at | 14725 | -0.022 | -0.2779 | No | ||
111 | LTBP1 | 1419786_at 1440678_at 1446232_at 1447547_at 1448870_at 1457852_at 1458739_at | 14759 | -0.023 | -0.2792 | No | ||
112 | CNTN4 | 1438782_at 1460321_at | 14867 | -0.028 | -0.2839 | No | ||
113 | NEUROD6 | 1418047_at | 14881 | -0.028 | -0.2843 | No | ||
114 | KLF12 | 1439846_at 1439847_s_at 1441040_at 1455521_at | 14936 | -0.031 | -0.2865 | No | ||
115 | HMGA2 | 1422851_at 1443394_at 1446196_at 1450780_s_at 1450781_at 1458241_at | 15224 | -0.042 | -0.2994 | No | ||
116 | COLEC10 | 1457871_at | 15467 | -0.053 | -0.3101 | No | ||
117 | SNX6 | 1425148_a_at 1429497_s_at 1447234_s_at 1451602_at | 15723 | -0.065 | -0.3212 | No | ||
118 | FOXP2 | 1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at | 15777 | -0.069 | -0.3231 | No | ||
119 | SLC37A1 | 1426601_at 1458991_at | 15935 | -0.077 | -0.3297 | No | ||
120 | MXD3 | 1422970_at 1438847_at 1448878_at | 16101 | -0.087 | -0.3366 | No | ||
121 | ANKRD28 | 1434630_at 1454801_at | 16239 | -0.095 | -0.3421 | No | ||
122 | GCNT2 | 1421415_s_at 1425503_at 1430826_s_at 1437607_at 1438660_at 1450238_at 1451733_at 1453674_at | 16376 | -0.105 | -0.3475 | No | ||
123 | PRKACA | 1447720_x_at 1450519_a_at | 16584 | -0.119 | -0.3560 | No | ||
124 | RIMS1 | 1435667_at 1438305_at 1444393_at | 16610 | -0.121 | -0.3562 | No | ||
125 | BRD8 | 1427192_a_at 1427193_at 1429526_at 1451137_a_at 1452350_at 1456351_at | 16698 | -0.127 | -0.3592 | No | ||
126 | KLF5 | 1430255_at 1451021_a_at 1451739_at | 16802 | -0.137 | -0.3628 | No | ||
127 | PPP2R5B | 1426811_at | 16864 | -0.142 | -0.3644 | No | ||
128 | BSCL2 | 1420632_a_at 1437345_a_at | 16877 | -0.143 | -0.3638 | No | ||
129 | PFTK1 | 1419249_at 1419250_a_at 1441692_at 1445984_at 1453956_a_at | 16938 | -0.148 | -0.3654 | No | ||
130 | OAZ2 | 1426763_at 1426764_at 1442541_at 1442735_at | 17044 | -0.157 | -0.3689 | No | ||
131 | RARG | 1419415_a_at 1419416_a_at | 17096 | -0.163 | -0.3699 | No | ||
132 | ELAVL4 | 1428741_at 1450258_a_at 1452894_at 1457399_at | 17201 | -0.174 | -0.3733 | No | ||
133 | DDR2 | 1422738_at 1455688_at | 17246 | -0.179 | -0.3738 | No | ||
134 | FAP | 1417552_at | 17450 | -0.204 | -0.3815 | No | ||
135 | JPH3 | 1418161_at 1443724_at | 17778 | -0.249 | -0.3945 | No | ||
136 | SMARCA2 | 1430526_a_at 1439930_at 1452333_at | 17897 | -0.265 | -0.3978 | No | ||
137 | CDK2 | 1416873_a_at 1447617_at | 18435 | -0.345 | -0.4196 | No | ||
138 | NRGN | 1423231_at | 18449 | -0.348 | -0.4174 | No | ||
139 | CAMK2A | 1437125_at 1441734_at 1442707_at 1443876_at 1452453_a_at 1457311_at | 18467 | -0.352 | -0.4153 | No | ||
140 | RGS2 | 1419247_at 1419248_at 1447830_s_at | 18668 | -0.389 | -0.4213 | No | ||
141 | MDM1 | 1445709_at 1451053_a_at | 19141 | -0.499 | -0.4389 | No | ||
142 | TCF12 | 1421908_a_at 1427670_a_at 1438762_at 1439209_at 1439619_at 1443012_at 1444620_at 1445093_at 1445133_at 1457524_at 1458337_at | 19178 | -0.507 | -0.4364 | No | ||
143 | RREB1 | 1428657_at 1434741_at 1438216_at 1442047_at 1452862_at | 19216 | -0.514 | -0.4339 | No | ||
144 | GPR22 | 1434672_at 1434673_at 1440019_at | 19253 | -0.522 | -0.4313 | No | ||
145 | ESRRA | 1442864_at 1460652_at | 19439 | -0.573 | -0.4352 | No | ||
146 | RFX3 | 1425413_at 1441253_at 1441702_at | 19501 | -0.592 | -0.4331 | No | ||
147 | PIGH | 1430589_at 1455860_at | 19532 | -0.599 | -0.4296 | No | ||
148 | DDIT3 | 1417516_at 1443897_at | 19609 | -0.622 | -0.4280 | No | ||
149 | NDEL1 | 1422568_at 1424893_at | 19934 | -0.735 | -0.4369 | No | ||
150 | MBD6 | 1418375_at | 20136 | -0.819 | -0.4395 | No | ||
151 | DACT1 | 1417937_at | 20353 | -0.915 | -0.4419 | Yes | ||
152 | HEBP1 | 1418172_at 1457903_at | 20399 | -0.941 | -0.4363 | Yes | ||
153 | CPNE1 | 1433439_at | 20504 | -0.998 | -0.4329 | Yes | ||
154 | GMPR2 | 1416356_at 1429180_at | 20595 | -1.053 | -0.4285 | Yes | ||
155 | MYO18A | 1451422_at | 20678 | -1.112 | -0.4231 | Yes | ||
156 | CACNB3 | 1448656_at | 20888 | -1.288 | -0.4222 | Yes | ||
157 | RASA3 | 1415850_at | 20947 | -1.346 | -0.4139 | Yes | ||
158 | RDH11 | 1418760_at 1449209_a_at | 21026 | -1.455 | -0.4056 | Yes | ||
159 | LIG4 | 1439487_at | 21045 | -1.471 | -0.3944 | Yes | ||
160 | CCL5 | 1418126_at | 21135 | -1.602 | -0.3854 | Yes | ||
161 | SEMA7A | 1422040_at 1459903_at | 21279 | -1.816 | -0.3772 | Yes | ||
162 | ARMET | 1428112_at 1459455_at | 21335 | -1.889 | -0.3643 | Yes | ||
163 | GTF3C2 | 1428448_a_at 1428449_at 1440307_at 1452780_at 1452781_a_at | 21386 | -1.975 | -0.3504 | Yes | ||
164 | MYST3 | 1436315_at 1437487_at 1446143_at 1446405_at | 21430 | -2.062 | -0.3356 | Yes | ||
165 | GPHN | 1426462_at 1426463_at 1430038_at 1444869_at 1445188_at 1458242_at | 21481 | -2.140 | -0.3204 | Yes | ||
166 | SPAG9 | 1430556_at 1433648_at 1437676_at | 21485 | -2.152 | -0.3030 | Yes | ||
167 | GMFG | 1419193_a_at 1419194_s_at | 21605 | -2.492 | -0.2881 | Yes | ||
168 | PIK3CG | 1422707_at 1422708_at | 21647 | -2.651 | -0.2683 | Yes | ||
169 | FLI1 | 1422024_at 1433512_at 1441584_at | 21654 | -2.665 | -0.2468 | Yes | ||
170 | SSBP2 | 1429951_at 1438423_at 1449815_a_at 1451542_at | 21680 | -2.763 | -0.2254 | Yes | ||
171 | UBE2H | 1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at | 21704 | -2.850 | -0.2032 | Yes | ||
172 | PIAS1 | 1422581_at 1446448_at 1455486_at 1455611_at | 21720 | -2.886 | -0.1803 | Yes | ||
173 | FGF13 | 1418497_at 1418498_at | 21760 | -3.067 | -0.1571 | Yes | ||
174 | MLL5 | 1427236_a_at 1432601_at 1434704_at 1439107_a_at 1439108_at | 21813 | -3.448 | -0.1313 | Yes | ||
175 | CCND2 | 1416122_at 1416123_at 1416124_at 1430127_a_at 1434745_at 1448229_s_at 1455956_x_at | 21827 | -3.509 | -0.1032 | Yes | ||
176 | ODF2 | 1426040_a_at 1435216_a_at 1439918_at 1444101_at 1454735_at | 21870 | -3.915 | -0.0732 | Yes | ||
177 | CDCA3 | 1448000_at 1448001_x_at 1452040_a_at | 21872 | -3.974 | -0.0408 | Yes | ||
178 | YWHAE | 1426384_a_at 1426385_x_at 1435702_s_at 1438839_a_at 1440841_at 1457173_at | 21918 | -5.349 | 0.0008 | Yes |