Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
Upregulated in class | ATM_minus |
GeneSet | V$E2F_Q6 |
Enrichment Score (ES) | 0.41277424 |
Normalized Enrichment Score (NES) | 1.3509785 |
Nominal p-value | 0.03206413 |
FDR q-value | 0.39820892 |
FWER p-Value | 1.0 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | HNRPD | 1425142_a_at 1446083_at | 33 | 4.652 | 0.0367 | Yes | ||
2 | CDCA7 | 1428069_at 1445681_at | 66 | 3.948 | 0.0676 | Yes | ||
3 | NOLC1 | 1428869_at 1428870_at 1450087_a_at | 110 | 3.462 | 0.0941 | Yes | ||
4 | POLA2 | 1425794_at 1448369_at 1456713_at | 120 | 3.359 | 0.1212 | Yes | ||
5 | HNRPA1 | 1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at | 123 | 3.348 | 0.1486 | Yes | ||
6 | NCL | 1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at | 183 | 3.021 | 0.1707 | Yes | ||
7 | HTF9C | 1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at | 210 | 2.897 | 0.1933 | Yes | ||
8 | MCM6 | 1416251_at 1438852_x_at 1447756_x_at | 293 | 2.536 | 0.2103 | Yes | ||
9 | SFRS2 | 1415807_s_at 1427504_s_at 1427816_at 1452439_s_at | 428 | 2.140 | 0.2217 | Yes | ||
10 | CDT1 | 1424143_a_at 1424144_at 1455791_at | 597 | 1.780 | 0.2286 | Yes | ||
11 | NASP | 1416042_s_at 1416043_at 1440328_at 1442728_at | 665 | 1.689 | 0.2394 | Yes | ||
12 | RAD51 | 1418281_at | 783 | 1.536 | 0.2467 | Yes | ||
13 | WEE1 | 1416773_at 1416774_at | 812 | 1.497 | 0.2577 | Yes | ||
14 | UNG | 1425753_a_at | 836 | 1.476 | 0.2687 | Yes | ||
15 | MCM4 | 1416214_at 1436708_x_at | 896 | 1.412 | 0.2776 | Yes | ||
16 | POLE2 | 1427094_at 1431440_at | 991 | 1.311 | 0.2841 | Yes | ||
17 | ATF5 | 1425927_a_at | 1060 | 1.244 | 0.2912 | Yes | ||
18 | SNRPD1 | 1416336_s_at | 1086 | 1.226 | 0.3001 | Yes | ||
19 | PHF5A | 1424170_at | 1109 | 1.206 | 0.3090 | Yes | ||
20 | POLE4 | 1423371_at 1423372_at 1432286_at 1444739_at | 1191 | 1.151 | 0.3147 | Yes | ||
21 | GMNN | 1417506_at | 1266 | 1.104 | 0.3203 | Yes | ||
22 | RANBP1 | 1422547_at | 1269 | 1.102 | 0.3293 | Yes | ||
23 | CDC6 | 1417019_a_at | 1359 | 1.045 | 0.3338 | Yes | ||
24 | PRPS1 | 1416052_at | 1386 | 1.021 | 0.3410 | Yes | ||
25 | GSPT1 | 1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at | 1410 | 1.011 | 0.3482 | Yes | ||
26 | KPNB1 | 1416925_at 1434357_a_at 1448526_at 1451967_x_at | 1504 | 0.964 | 0.3519 | Yes | ||
27 | PB1 | 1426877_a_at 1426878_at 1427266_at 1442603_at | 1535 | 0.952 | 0.3583 | Yes | ||
28 | ILF3 | 1422546_at 1436802_at 1460669_at | 1711 | 0.873 | 0.3574 | Yes | ||
29 | SFRS10 | 1419543_a_at 1427432_a_at 1441466_at 1446496_at | 1734 | 0.860 | 0.3635 | Yes | ||
30 | RQCD1 | 1450887_at | 1777 | 0.841 | 0.3685 | Yes | ||
31 | EZH2 | 1416544_at 1444263_at | 2029 | 0.737 | 0.3630 | Yes | ||
32 | UXT | 1418986_a_at | 2030 | 0.737 | 0.3690 | Yes | ||
33 | SEMA5A | 1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at | 2041 | 0.733 | 0.3746 | Yes | ||
34 | POLD1 | 1448187_at 1456055_x_at | 2046 | 0.729 | 0.3804 | Yes | ||
35 | CLSPN | 1441984_at 1456280_at | 2089 | 0.718 | 0.3844 | Yes | ||
36 | E2F3 | 1427462_at 1434564_at | 2103 | 0.713 | 0.3896 | Yes | ||
37 | DNAJC9 | 1426473_at | 2208 | 0.681 | 0.3904 | Yes | ||
38 | AK2 | 1448450_at 1448451_at | 2274 | 0.659 | 0.3929 | Yes | ||
39 | MRPL40 | 1448849_at | 2285 | 0.656 | 0.3978 | Yes | ||
40 | POLR2A | 1422311_a_at 1426242_at 1458710_at | 2325 | 0.644 | 0.4013 | Yes | ||
41 | POLD3 | 1426838_at 1426839_at 1443733_x_at 1459647_at | 2337 | 0.640 | 0.4060 | Yes | ||
42 | UFD1L | 1418087_at 1432367_a_at | 2498 | 0.595 | 0.4036 | Yes | ||
43 | RRM2 | 1416120_at 1434437_x_at 1448226_at | 2521 | 0.591 | 0.4074 | Yes | ||
44 | MSH2 | 1416988_at 1447888_x_at | 2634 | 0.567 | 0.4069 | Yes | ||
45 | INSM1 | 1421399_at 1455865_at | 2652 | 0.562 | 0.4108 | Yes | ||
46 | MCM7 | 1416030_a_at 1416031_s_at 1438320_s_at | 2708 | 0.547 | 0.4127 | Yes | ||
47 | SLC9A5 | 1420070_a_at 1455760_at | 2876 | 0.513 | 0.4093 | Yes | ||
48 | JPH1 | 1421520_at 1438428_at | 2910 | 0.506 | 0.4119 | Yes | ||
49 | PCNA | 1417947_at | 2980 | 0.492 | 0.4128 | Yes | ||
50 | MCM8 | 1429557_at | 3109 | 0.467 | 0.4107 | No | ||
51 | NELL2 | 1423560_at 1423561_at | 3204 | 0.451 | 0.4101 | No | ||
52 | SFRS7 | 1424033_at 1424883_s_at 1436871_at | 3351 | 0.431 | 0.4069 | No | ||
53 | MCM2 | 1434079_s_at 1448777_at | 3383 | 0.426 | 0.4090 | No | ||
54 | ING3 | 1422805_a_at 1422806_x_at 1450760_a_at 1460082_at | 3396 | 0.424 | 0.4120 | No | ||
55 | RBL1 | 1424156_at 1425166_at 1432604_at 1454293_at | 3466 | 0.414 | 0.4122 | No | ||
56 | E2F1 | 1417878_at 1431875_a_at 1447840_x_at | 3596 | 0.399 | 0.4095 | No | ||
57 | HIRA | 1436241_s_at 1450049_a_at 1450050_at 1459103_at | 3711 | 0.386 | 0.4075 | No | ||
58 | GPRC5B | 1424613_at 1451411_at | 4122 | 0.343 | 0.3914 | No | ||
59 | HS6ST3 | 1421599_at | 4143 | 0.341 | 0.3933 | No | ||
60 | AP4M1 | 1418846_at | 4232 | 0.335 | 0.3920 | No | ||
61 | FANCD2 | 1430916_at 1438339_at 1439091_at 1442092_at | 4450 | 0.317 | 0.3847 | No | ||
62 | PCSK1 | 1421396_at | 4475 | 0.315 | 0.3862 | No | ||
63 | DNAJC11 | 1433880_at 1433881_at 1439763_at 1446686_at 1447055_at | 4647 | 0.303 | 0.3808 | No | ||
64 | ARHGAP11A | 1438434_at | 4651 | 0.302 | 0.3831 | No | ||
65 | SYNGR4 | 1418875_at | 4964 | 0.284 | 0.3711 | No | ||
66 | PAQR4 | 1423101_at | 5282 | 0.269 | 0.3588 | No | ||
67 | STMN1 | 1415849_s_at | 5579 | 0.255 | 0.3473 | No | ||
68 | SFRS12 | 1427134_at 1427135_at 1427136_s_at 1458056_at | 5692 | 0.249 | 0.3442 | No | ||
69 | ZBTB4 | 1429722_at 1460488_at | 5970 | 0.237 | 0.3334 | No | ||
70 | HMGN2 | 1433507_a_at | 6108 | 0.230 | 0.3290 | No | ||
71 | PKMYT1 | 1418481_at 1438601_at | 6385 | 0.220 | 0.3181 | No | ||
72 | EPHB1 | 1455188_at | 6800 | 0.204 | 0.3008 | No | ||
73 | EFNA5 | 1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at | 6826 | 0.203 | 0.3013 | No | ||
74 | PHF15 | 1430081_at 1455345_at | 7124 | 0.192 | 0.2893 | No | ||
75 | SEMA6A | 1421414_a_at 1425903_at 1436458_at | 8553 | 0.148 | 0.2249 | No | ||
76 | CORT | 1449820_at | 8681 | 0.144 | 0.2202 | No | ||
77 | GABRB3 | 1421189_at 1421190_at 1435021_at | 8767 | 0.142 | 0.2175 | No | ||
78 | PAX6 | 1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at | 9129 | 0.132 | 0.2020 | No | ||
79 | TREX2 | 1449367_at | 9957 | 0.109 | 0.1649 | No | ||
80 | GRIA4 | 1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at | 10027 | 0.107 | 0.1626 | No | ||
81 | STK35 | 1431107_at 1439802_at | 10292 | 0.101 | 0.1513 | No | ||
82 | NRP2 | 1425433_a_at 1426528_at 1435349_at 1452552_at 1456778_at 1459256_at | 10474 | 0.097 | 0.1438 | No | ||
83 | FHOD1 | 1435557_at | 10486 | 0.096 | 0.1441 | No | ||
84 | ATAD2 | 1436174_at 1443146_at 1443229_at | 10715 | 0.091 | 0.1344 | No | ||
85 | DNMT1 | 1422946_a_at 1435122_x_at 1445637_at 1447877_x_at | 10924 | 0.085 | 0.1255 | No | ||
86 | PODN | 1435180_at | 11313 | 0.075 | 0.1083 | No | ||
87 | RPS6KA5 | 1431050_at 1437625_at 1439004_at 1440343_at | 11372 | 0.074 | 0.1063 | No | ||
88 | SOAT1 | 1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at | 11454 | 0.072 | 0.1031 | No | ||
89 | HOXC10 | 1439798_at | 11601 | 0.067 | 0.0970 | No | ||
90 | CSPG2 | 1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at | 11611 | 0.067 | 0.0971 | No | ||
91 | SLC6A4 | 1417150_at | 11642 | 0.067 | 0.0963 | No | ||
92 | FBXO5 | 1429499_at | 11832 | 0.062 | 0.0881 | No | ||
93 | PRPF4B | 1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at | 11921 | 0.060 | 0.0846 | No | ||
94 | KCNA6 | 1421568_at 1441049_at 1456954_at | 11996 | 0.058 | 0.0816 | No | ||
95 | PVRL1 | 1438111_at 1438421_at 1440131_at 1446488_at 1450819_at | 12861 | 0.036 | 0.0423 | No | ||
96 | RAVER1 | 1427110_at 1427111_s_at 1444966_at | 13140 | 0.029 | 0.0297 | No | ||
97 | YBX2 | 1420762_a_at | 13680 | 0.013 | 0.0051 | No | ||
98 | KCND2 | 1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at | 13826 | 0.009 | -0.0015 | No | ||
99 | MYH10 | 1441057_at 1452740_at | 13934 | 0.005 | -0.0064 | No | ||
100 | DMD | 1417307_at 1430320_at 1446156_at 1448665_at 1457022_at | 13998 | 0.004 | -0.0092 | No | ||
101 | RASAL2 | 1436910_at 1444671_at | 14158 | -0.001 | -0.0165 | No | ||
102 | ARHGAP6 | 1417704_a_at 1451867_x_at 1456333_a_at | 14290 | -0.006 | -0.0225 | No | ||
103 | SLC38A1 | 1415903_at 1454764_s_at | 14568 | -0.017 | -0.0351 | No | ||
104 | RHD | 1417049_at | 14748 | -0.023 | -0.0431 | No | ||
105 | TOPBP1 | 1452241_at 1458480_at | 15055 | -0.035 | -0.0569 | No | ||
106 | TYRO3 | 1425248_a_at 1425249_a_at | 15439 | -0.051 | -0.0740 | No | ||
107 | DNAJC5G | 1437814_at | 15523 | -0.055 | -0.0774 | No | ||
108 | FMO4 | 1425799_at 1444852_at | 16077 | -0.086 | -0.1021 | No | ||
109 | MXD3 | 1422970_at 1438847_at 1448878_at | 16101 | -0.087 | -0.1024 | No | ||
110 | CTNND2 | 1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at | 16532 | -0.115 | -0.1212 | No | ||
111 | WHSC1L1 | 1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at | 16926 | -0.146 | -0.1381 | No | ||
112 | PIM1 | 1423006_at 1435458_at | 16948 | -0.149 | -0.1378 | No | ||
113 | BRMS1L | 1452850_s_at 1460443_at | 17056 | -0.158 | -0.1414 | No | ||
114 | HCN3 | 1451023_at | 17304 | -0.186 | -0.1513 | No | ||
115 | PPM1D | 1434142_at 1449092_at 1459069_at | 17334 | -0.189 | -0.1510 | No | ||
116 | CASP8AP2 | 1449217_at | 17386 | -0.196 | -0.1518 | No | ||
117 | EED | 1448653_at | 17402 | -0.198 | -0.1508 | No | ||
118 | STAG2 | 1421849_at 1450396_at | 17433 | -0.202 | -0.1506 | No | ||
119 | CBX5 | 1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at | 17594 | -0.225 | -0.1561 | No | ||
120 | CDC25A | 1417131_at 1417132_at 1445995_at | 17656 | -0.233 | -0.1570 | No | ||
121 | PRKDC | 1451576_at | 17660 | -0.234 | -0.1552 | No | ||
122 | DDB2 | 1425706_a_at 1436680_s_at | 17878 | -0.262 | -0.1630 | No | ||
123 | IL4I1 | 1419192_at | 17947 | -0.271 | -0.1639 | No | ||
124 | USP37 | 1434242_at 1438212_at | 18470 | -0.352 | -0.1850 | No | ||
125 | CCNT1 | 1419313_at 1456477_at | 18518 | -0.359 | -0.1842 | No | ||
126 | PHF13 | 1455175_at | 18589 | -0.373 | -0.1843 | No | ||
127 | HNRPUL1 | 1451984_at | 18655 | -0.387 | -0.1841 | No | ||
128 | SP3 | 1431804_a_at 1459360_at | 18758 | -0.407 | -0.1855 | No | ||
129 | ADAMTS2 | 1435990_at 1455720_at 1457058_at | 18807 | -0.419 | -0.1842 | No | ||
130 | TBX6 | 1449868_at | 18856 | -0.431 | -0.1829 | No | ||
131 | ACBD6 | 1452601_a_at 1453199_at | 18993 | -0.463 | -0.1854 | No | ||
132 | ASXL2 | 1439063_at 1444754_at 1453295_at 1458366_at 1460597_at | 18997 | -0.464 | -0.1817 | No | ||
133 | PHC1 | 1423212_at | 19047 | -0.474 | -0.1800 | No | ||
134 | MAZ | 1427099_at | 19064 | -0.479 | -0.1768 | No | ||
135 | DDX17 | 1437773_x_at 1439037_at 1452155_a_at | 19116 | -0.492 | -0.1752 | No | ||
136 | ALDH6A1 | 1448104_at | 19125 | -0.495 | -0.1715 | No | ||
137 | SUMO1 | 1438289_a_at 1444557_at 1451005_at 1456349_x_at | 19152 | -0.500 | -0.1685 | No | ||
138 | IPO7 | 1442511_at 1454955_at 1458165_at | 19340 | -0.545 | -0.1727 | No | ||
139 | ACO2 | 1436934_s_at 1442102_at 1451002_at | 19611 | -0.623 | -0.1800 | No | ||
140 | NUP153 | 1441689_at 1441733_s_at 1452176_at | 19846 | -0.705 | -0.1849 | No | ||
141 | CTCF | 1418330_at 1449042_at | 19910 | -0.726 | -0.1818 | No | ||
142 | CDC45L | 1416575_at 1457838_at | 20026 | -0.772 | -0.1808 | No | ||
143 | RAB11B | 1423448_at | 20090 | -0.799 | -0.1771 | No | ||
144 | STAG1 | 1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at | 20101 | -0.806 | -0.1710 | No | ||
145 | PPP1R8 | 1424554_at 1435821_s_at | 20171 | -0.838 | -0.1673 | No | ||
146 | USP52 | 1426700_a_at | 20588 | -1.049 | -0.1777 | No | ||
147 | H2AFZ | 1441370_at | 20630 | -1.076 | -0.1708 | No | ||
148 | E2F7 | 1437187_at | 20706 | -1.134 | -0.1649 | No | ||
149 | HNRPR | 1427129_a_at 1438807_at 1452030_a_at | 20768 | -1.190 | -0.1580 | No | ||
150 | SFRS1 | 1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at | 20867 | -1.271 | -0.1520 | No | ||
151 | UGCGL1 | 1432318_at 1448009_at 1455839_at | 21127 | -1.587 | -0.1509 | No | ||
152 | NUP62 | 1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at | 21173 | -1.664 | -0.1393 | No | ||
153 | PPP1CC | 1440594_at | 21199 | -1.702 | -0.1265 | No | ||
154 | DCK | 1428838_a_at 1439012_a_at 1449176_a_at | 21326 | -1.880 | -0.1168 | No | ||
155 | SLCO3A1 | 1418030_at 1434537_at 1448918_at | 21342 | -1.913 | -0.1018 | No | ||
156 | KBTBD7 | 1428192_at 1439865_at 1452700_s_at | 21353 | -1.923 | -0.0865 | No | ||
157 | MCM3 | 1420029_at 1426653_at | 21359 | -1.933 | -0.0708 | No | ||
158 | ARID4A | 1436191_at 1438464_at 1456420_at | 21414 | -2.023 | -0.0567 | No | ||
159 | ERBB2IP | 1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at | 21476 | -2.135 | -0.0420 | No | ||
160 | TMPO | 1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at | 21518 | -2.216 | -0.0257 | No | ||
161 | ID3 | 1416630_at | 21590 | -2.418 | -0.0091 | No | ||
162 | ZCCHC8 | 1423755_at 1441639_at | 21755 | -3.037 | 0.0083 | No |