Details for gene set V$E2F_Q4

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F_Q4_01
Enrichment Score (ES)	0.41134018
Normalized Enrichment Score (NES)	1.3495849
Nominal p-value	0.021912351
FDR q-value	0.3501055
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HNRPD	1425142_a_at 1446083_at	33	4.652	0.0330	Yes
2	CDCA7	1428069_at 1445681_at	66	3.948	0.0608	Yes
3	DPYSL2	1433770_at 1450502_at 1458188_at 1458632_at	101	3.510	0.0852	Yes
4	BMP7	1418910_at 1432410_a_at	107	3.485	0.1109	Yes
5	HOXA9	1421579_at 1455626_at	116	3.390	0.1356	Yes
6	POLA2	1425794_at 1448369_at 1456713_at	120	3.359	0.1604	Yes
7	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	123	3.348	0.1851	Yes
8	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	183	3.021	0.2048	Yes
9	PRIM1	1418369_at 1444544_at 1449061_a_at	185	3.013	0.2271	Yes
10	LUC7L2	1423251_at 1427087_at 1436165_at 1436766_at 1436767_at 1437761_at 1458423_at	193	2.967	0.2488	Yes
11	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	210	2.897	0.2695	Yes
12	MCM6	1416251_at 1438852_x_at 1447756_x_at	293	2.536	0.2846	Yes
13	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	428	2.140	0.2943	Yes
14	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	665	1.689	0.2959	Yes
15	MYC	1424942_a_at	729	1.605	0.3050	Yes
16	RAD51	1418281_at	783	1.536	0.3139	Yes
17	WEE1	1416773_at 1416774_at	812	1.497	0.3237	Yes
18	UNG	1425753_a_at	836	1.476	0.3336	Yes
19	ATP5G2	1415980_at 1456128_at	878	1.426	0.3423	Yes
20	MCM4	1416214_at 1436708_x_at	896	1.412	0.3520	Yes
21	POLE2	1427094_at 1431440_at	991	1.311	0.3574	Yes
22	HMGA1	1416184_s_at	1159	1.173	0.3584	Yes
23	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	1191	1.151	0.3655	Yes
24	GMNN	1417506_at	1266	1.104	0.3703	Yes
25	RANBP1	1422547_at	1269	1.102	0.3784	Yes
26	CDC6	1417019_a_at	1359	1.045	0.3821	Yes
27	TIAM1	1418057_at 1444373_at 1453887_a_at	1401	1.016	0.3877	Yes
28	IMPDH2	1415851_a_at 1415852_at	1409	1.012	0.3949	Yes
29	KPNB1	1416925_at 1434357_a_at 1448526_at 1451967_x_at	1504	0.964	0.3977	Yes
30	MELK	1416558_at	1576	0.933	0.4014	Yes
31	PCSK4	1425824_a_at	1662	0.895	0.4041	Yes
32	USP2	1417168_a_at 1417169_at	1973	0.758	0.3955	Yes
33	EZH2	1416544_at 1444263_at	2029	0.737	0.3984	Yes
34	UXT	1418986_a_at	2030	0.737	0.4039	Yes
35	SEMA5A	1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at	2041	0.733	0.4089	Yes
36	E2F3	1427462_at 1434564_at	2103	0.713	0.4113	Yes
37	RCOR2	1417302_at	2403	0.623	0.4022	No
38	UFD1L	1418087_at 1432367_a_at	2498	0.595	0.4023	No
39	KNTC1	1435575_at	2533	0.588	0.4051	No
40	PPRC1	1426381_at	2677	0.556	0.4027	No
41	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	2708	0.547	0.4053	No
42	JPH1	1421520_at 1438428_at	2910	0.506	0.3999	No
43	PLK4	1419838_s_at 1426580_at 1452115_a_at	2973	0.492	0.4007	No
44	PCNA	1417947_at	2980	0.492	0.4040	No
45	RPS19	1449243_a_at 1460442_at	3166	0.459	0.3989	No
46	ORC1L	1422663_at 1443172_at	3218	0.449	0.3999	No
47	ABCF2	1423863_at	3256	0.442	0.4015	No
48	MCM2	1434079_s_at 1448777_at	3383	0.426	0.3989	No
49	E2F1	1417878_at 1431875_a_at 1447840_x_at	3596	0.399	0.3921	No
50	SFMBT1	1422893_at 1422894_at 1443853_x_at	3753	0.381	0.3877	No
51	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	4004	0.353	0.3789	No
52	GPRC5B	1424613_at 1451411_at	4122	0.343	0.3760	No
53	AP4M1	1418846_at	4232	0.335	0.3735	No
54	ERF	1422114_at 1435561_at	4585	0.306	0.3596	No
55	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	4647	0.303	0.3591	No
56	ARHGAP11A	1438434_at	4651	0.302	0.3612	No
57	SLBP	1430058_at 1460168_at	5017	0.282	0.3465	No
58	PAQR4	1423101_at	5282	0.269	0.3364	No
59	IPO11	1428096_at 1429717_at	5305	0.268	0.3373	No
60	STMN1	1415849_s_at	5579	0.255	0.3267	No
61	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	5692	0.249	0.3234	No
62	ZIM2	1432297_at	5778	0.245	0.3213	No
63	PTMA	1423455_at	5941	0.238	0.3156	No
64	GLRA3	1450239_at	5985	0.236	0.3154	No
65	HMGN2	1433507_a_at	6108	0.230	0.3115	No
66	PKMYT1	1418481_at 1438601_at	6385	0.220	0.3004	No
67	DCLRE1A	1417904_at 1432097_a_at 1442329_at	6548	0.214	0.2946	No
68	EPHB1	1455188_at	6800	0.204	0.2846	No
69	PHF15	1430081_at 1455345_at	7124	0.192	0.2712	No
70	UCHL1	1448260_at	7615	0.175	0.2499	No
71	NR3C2	1435991_at 1440306_at 1442533_at	8511	0.149	0.2099	No
72	ERG	1425370_a_at 1440244_at	8564	0.148	0.2086	No
73	PCDH7	1427592_at 1437442_at 1449249_at 1456214_at	8577	0.147	0.2092	No
74	RNF121	1426503_a_at 1426504_a_at	8770	0.142	0.2014	No
75	BAI1	1455363_at	8807	0.140	0.2008	No
76	ETV4	1423232_at 1443381_at	9279	0.128	0.1801	No
77	NDUFA11	1429708_at 1444154_at	9455	0.123	0.1730	No
78	DMRT1	1423582_at	9579	0.120	0.1682	No
79	ANP32E	1420592_a_at 1447680_at	9974	0.109	0.1509	No
80	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	9984	0.109	0.1513	No
81	PIK3R3	1445097_at 1447068_at 1456482_at	10269	0.101	0.1390	No
82	NEGR1	1439303_at 1446279_at 1456392_at 1459126_at	10342	0.100	0.1364	No
83	NRP2	1425433_a_at 1426528_at 1435349_at 1452552_at 1456778_at 1459256_at	10474	0.097	0.1311	No
84	SALL1	1450489_at	10593	0.093	0.1264	No
85	ATAD2	1436174_at 1443146_at 1443229_at	10715	0.091	0.1215	No
86	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	10924	0.085	0.1126	No
87	PODN	1435180_at	11313	0.075	0.0953	No
88	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	11372	0.074	0.0932	No
89	HOXC10	1439798_at	11601	0.067	0.0833	No
90	SLC6A4	1417150_at	11642	0.067	0.0819	No
91	FBXO5	1429499_at	11832	0.062	0.0737	No
92	KCNA6	1421568_at 1441049_at 1456954_at	11996	0.058	0.0666	No
93	FANCC	1442265_at 1447632_at 1450861_at	12368	0.050	0.0499	No
94	YWHAQ	1420828_s_at 1420829_a_at 1420830_x_at 1432842_s_at 1437608_x_at 1454378_at 1460590_s_at 1460621_x_at	12435	0.048	0.0473	No
95	PPP1R9B	1447247_at 1447486_at	12818	0.037	0.0300	No
96	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	12861	0.036	0.0283	No
97	MAT2A	1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at	13300	0.024	0.0084	No
98	SLC16A2	1418446_at	13365	0.023	0.0056	No
99	APRIN	1435242_at 1436161_at 1441553_at	13489	0.019	0.0001	No
100	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	13539	0.018	-0.0020	No
101	YBX2	1420762_a_at	13680	0.013	-0.0083	No
102	KCND2	1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at	13826	0.009	-0.0149	No
103	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	13998	0.004	-0.0228	No
104	PEG3	1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at	14442	-0.012	-0.0430	No
105	SLC38A1	1415903_at 1454764_s_at	14568	-0.017	-0.0487	No
106	TBX3	1437479_x_at 1439567_at 1444594_at 1445757_at 1448029_at	14626	-0.019	-0.0511	No
107	GPS2	1417796_at	14873	-0.028	-0.0622	No
108	TOPBP1	1452241_at 1458480_at	15055	-0.035	-0.0703	No
109	FANCG	1420960_at	15397	-0.049	-0.0856	No
110	DNAJC5G	1437814_at	15523	-0.055	-0.0909	No
111	FMO4	1425799_at 1444852_at	16077	-0.086	-0.1157	No
112	MXD3	1422970_at 1438847_at 1448878_at	16101	-0.087	-0.1161	No
113	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	16168	-0.091	-0.1185	No
114	EPHB2	1425015_at 1425016_at 1442471_at 1445417_at 1454022_at	16499	-0.112	-0.1328	No
115	DAXX	1419026_at	16511	-0.113	-0.1325	No
116	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	16532	-0.115	-0.1325	No
117	RFC1	1418342_at 1449050_at 1451920_a_at	16578	-0.118	-0.1337	No
118	TMEM15	1424366_at	16583	-0.119	-0.1330	No
119	KLF5	1430255_at 1451021_a_at 1451739_at	16802	-0.137	-0.1420	No
120	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	16926	-0.146	-0.1466	No
121	SYT11	1429314_at 1429315_at 1429729_at 1436176_at 1449264_at 1455176_a_at	17004	-0.154	-0.1490	No
122	BRMS1L	1452850_s_at 1460443_at	17056	-0.158	-0.1501	No
123	MAP3K13	1430137_at 1440749_at 1447699_at	17075	-0.162	-0.1498	No
124	PPM1D	1434142_at 1449092_at 1459069_at	17334	-0.189	-0.1602	No
125	CASP8AP2	1449217_at	17386	-0.196	-0.1611	No
126	STAG2	1421849_at 1450396_at	17433	-0.202	-0.1617	No
127	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	17594	-0.225	-0.1674	No
128	CDC25A	1417131_at 1417132_at 1445995_at	17656	-0.233	-0.1685	No
129	PRKDC	1451576_at	17660	-0.234	-0.1669	No
130	DDB2	1425706_a_at 1436680_s_at	17878	-0.262	-0.1749	No
131	CASP2	1448165_at	18301	-0.325	-0.1919	No
132	EIF5A	1437859_x_at 1451470_s_at	18391	-0.339	-0.1935	No
133	ADAMTS2	1435990_at 1455720_at 1457058_at	18807	-0.419	-0.2094	No
134	ACBD6	1452601_a_at 1453199_at	18993	-0.463	-0.2145	No
135	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	18997	-0.464	-0.2112	No
136	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	19006	-0.466	-0.2081	No
137	MAZ	1427099_at	19064	-0.479	-0.2072	No
138	DDX17	1437773_x_at 1439037_at 1452155_a_at	19116	-0.492	-0.2059	No
139	NHLRC2	1429145_at 1433929_at 1444863_at 1453048_at 1457312_at	19277	-0.528	-0.2093	No
140	FBXL20	1442464_at 1445575_at 1452826_s_at 1456378_s_at	19319	-0.540	-0.2072	No
141	IPO7	1442511_at 1454955_at 1458165_at	19340	-0.545	-0.2041	No
142	PIK3R4	1460352_s_at	19442	-0.574	-0.2045	No
143	CTCF	1418330_at 1449042_at	19910	-0.726	-0.2205	No
144	GATA3	1448886_at	19953	-0.743	-0.2170	No
145	CDC45L	1416575_at 1457838_at	20026	-0.772	-0.2145	No
146	NCOA6	1423374_at	20045	-0.779	-0.2096	No
147	RAB11B	1423448_at	20090	-0.799	-0.2057	No
148	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	20101	-0.806	-0.2002	No
149	PPP1R8	1424554_at 1435821_s_at	20171	-0.838	-0.1971	No
150	RBPSUH	1418114_at 1438848_at 1446436_at 1448957_at 1454896_at	20177	-0.841	-0.1911	No
151	NUTF2	1434367_s_at 1447440_at 1449017_at	20257	-0.873	-0.1883	No
152	TNPO2	1425592_at 1425593_at 1437283_at	20429	-0.961	-0.1890	No
153	USP52	1426700_a_at	20588	-1.049	-0.1885	No
154	H2AFZ	1441370_at	20630	-1.076	-0.1824	No
155	JMJD1A	1426810_at	20644	-1.089	-0.1749	No
156	E2F7	1437187_at	20706	-1.134	-0.1693	No
157	FBXO9	1417480_at 1432211_a_at	20781	-1.201	-0.1638	No
158	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	20820	-1.232	-0.1564	No
159	DLST	1423710_at 1430161_at 1431011_at 1437775_at	20847	-1.251	-0.1483	No
160	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	20867	-1.271	-0.1398	No
161	AXUD1	1434350_at	21226	-1.744	-0.1433	No
162	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21326	-1.880	-0.1339	No
163	MCM3	1420029_at 1426653_at	21359	-1.933	-0.1210	No
164	ARID4A	1436191_at 1438464_at 1456420_at	21414	-2.023	-0.1085	No
165	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	21476	-2.135	-0.0955	No
166	HRBL	1425362_at 1437642_at 1441347_at	21566	-2.335	-0.0823	No
167	ID3	1416630_at	21590	-2.418	-0.0654	No
168	OSBPL7	1428893_at 1459966_at	21622	-2.554	-0.0479	No
169	ZCCHC8	1423755_at 1441639_at	21755	-3.037	-0.0314	No
170	RBBP4	1434892_x_at 1442443_at 1454791_a_at 1454875_a_at 1456260_at	21919	-5.356	0.0008	No