Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F_03
Enrichment Score (ES)	0.45748857
Normalized Enrichment Score (NES)	1.5064046
Nominal p-value	0.0019762847
FDR q-value	1.0
FWER p-Value	0.798

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HNRPD	1425142_a_at 1446083_at	33	4.652	0.0312	Yes
2	CDCA7	1428069_at 1445681_at	66	3.948	0.0576	Yes
3	EIF2S1	1440272_at 1452662_a_at	78	3.772	0.0836	Yes
4	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	87	3.668	0.1091	Yes
5	DPYSL2	1433770_at 1450502_at 1458188_at 1458632_at	101	3.510	0.1332	Yes
6	BMP7	1418910_at 1432410_a_at	107	3.485	0.1575	Yes
7	POLA2	1425794_at 1448369_at 1456713_at	120	3.359	0.1806	Yes
8	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	123	3.348	0.2041	Yes
9	PRIM1	1418369_at 1444544_at 1449061_a_at	185	3.013	0.2225	Yes
10	LUC7L2	1423251_at 1427087_at 1436165_at 1436766_at 1436767_at 1437761_at 1458423_at	193	2.967	0.2431	Yes
11	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	210	2.897	0.2628	Yes
12	MCM6	1416251_at 1438852_x_at 1447756_x_at	293	2.536	0.2769	Yes
13	EIF4G2	1415863_at 1452758_s_at	343	2.384	0.2914	Yes
14	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	428	2.140	0.3026	Yes
15	CDKN1A	1421679_a_at 1424638_at	454	2.078	0.3161	Yes
16	TCP1	1442317_at 1448122_at	544	1.881	0.3252	Yes
17	ARF3	1421789_s_at 1423973_a_at 1434787_at 1437331_a_at 1456007_at	582	1.809	0.3363	Yes
18	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	665	1.689	0.3444	Yes
19	MYC	1424942_a_at	729	1.605	0.3528	Yes
20	RAD51	1418281_at	783	1.536	0.3612	Yes
21	UNG	1425753_a_at	836	1.476	0.3692	Yes
22	MCM4	1416214_at 1436708_x_at	896	1.412	0.3764	Yes
23	FUS	1451285_at 1451286_s_at 1455831_at 1458801_at	1136	1.191	0.3738	Yes
24	GMNN	1417506_at	1266	1.104	0.3757	Yes
25	RANBP1	1422547_at	1269	1.102	0.3833	Yes
26	CDC6	1417019_a_at	1359	1.045	0.3866	Yes
27	PRPS1	1416052_at	1386	1.021	0.3926	Yes
28	LGALS1	1419573_a_at 1455439_a_at	1387	1.021	0.3998	Yes
29	TIAM1	1418057_at 1444373_at 1453887_a_at	1401	1.016	0.4064	Yes
30	SEZ6	1420885_a_at 1427674_a_at 1459972_x_at	1573	0.934	0.4051	Yes
31	MELK	1416558_at	1576	0.933	0.4115	Yes
32	LIG1	1416641_at	1607	0.917	0.4166	Yes
33	NRIP3	1418104_at 1431597_a_at 1448954_at	1618	0.910	0.4226	Yes
34	PCSK4	1425824_a_at	1662	0.895	0.4269	Yes
35	MRPL18	1448373_at	1683	0.886	0.4322	Yes
36	RPA2	1416433_at 1454011_a_at	1887	0.793	0.4285	Yes
37	EZH2	1416544_at 1444263_at	2029	0.737	0.4272	Yes
38	UXT	1418986_a_at	2030	0.737	0.4324	Yes
39	SEMA5A	1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at	2041	0.733	0.4371	Yes
40	POLD1	1448187_at 1456055_x_at	2046	0.729	0.4420	Yes
41	E2F3	1427462_at 1434564_at	2103	0.713	0.4445	Yes
42	DNAJC9	1426473_at	2208	0.681	0.4445	Yes
43	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	2273	0.660	0.4462	Yes
44	AK2	1448450_at 1448451_at	2274	0.659	0.4509	Yes
45	RCOR2	1417302_at	2403	0.623	0.4494	Yes
46	KCTD15	1435339_at	2416	0.619	0.4532	Yes
47	UFD1L	1418087_at 1432367_a_at	2498	0.595	0.4536	Yes
48	KNTC1	1435575_at	2533	0.588	0.4562	Yes
49	PPRC1	1426381_at	2677	0.556	0.4536	Yes
50	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	2708	0.547	0.4560	Yes
51	ANP32A	1421918_at 1434555_at 1450407_a_at	2759	0.533	0.4575	Yes
52	JPH1	1421520_at 1438428_at	2910	0.506	0.4542	No
53	PLK4	1419838_s_at 1426580_at 1452115_a_at	2973	0.492	0.4548	No
54	ORC1L	1422663_at 1443172_at	3218	0.449	0.4467	No
55	MCM2	1434079_s_at 1448777_at	3383	0.426	0.4422	No
56	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	3396	0.424	0.4446	No
57	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	3466	0.414	0.4444	No
58	KLHDC3	1415991_a_at 1448164_at 1454747_a_at 1455910_at	3502	0.410	0.4457	No
59	RET	1421359_at	3509	0.410	0.4483	No
60	E2F1	1417878_at 1431875_a_at 1447840_x_at	3596	0.399	0.4471	No
61	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	4004	0.353	0.4309	No
62	AP4M1	1418846_at	4232	0.335	0.4228	No
63	PCSK1	1421396_at	4475	0.315	0.4139	No
64	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	4647	0.303	0.4082	No
65	DMC1	1420335_at 1449819_at	4899	0.288	0.3987	No
66	SLBP	1430058_at 1460168_at	5017	0.282	0.3953	No
67	PAQR4	1423101_at	5282	0.269	0.3851	No
68	STMN1	1415849_s_at	5579	0.255	0.3733	No
69	ZIM2	1432297_at	5778	0.245	0.3659	No
70	PTMA	1423455_at	5941	0.238	0.3601	No
71	GLRA3	1450239_at	5985	0.236	0.3598	No
72	HMGN2	1433507_a_at	6108	0.230	0.3558	No
73	PKMYT1	1418481_at 1438601_at	6385	0.220	0.3447	No
74	ARHGEF17	1419938_s_at 1419939_at 1433682_at 1442357_at 1447441_at	6412	0.219	0.3451	No
75	DCLRE1A	1417904_at 1432097_a_at 1442329_at	6548	0.214	0.3404	No
76	EPHB1	1455188_at	6800	0.204	0.3303	No
77	PHF15	1430081_at 1455345_at	7124	0.192	0.3168	No
78	SLITRK3	1439250_at	7202	0.190	0.3146	No
79	A2BP1	1418314_a_at 1438217_at 1447735_x_at 1455358_at 1456921_at	7915	0.167	0.2830	No
80	PDGFRA	1421916_at 1421917_at 1438946_at	7936	0.166	0.2833	No
81	NR3C2	1435991_at 1440306_at 1442533_at	8511	0.149	0.2580	No
82	RPL28	1416074_a_at	8599	0.146	0.2550	No
83	RNF121	1426503_a_at 1426504_a_at	8770	0.142	0.2482	No
84	PRKCSH	1416339_a_at	9598	0.119	0.2110	No
85	TREX2	1449367_at	9957	0.109	0.1954	No
86	ANP32E	1420592_a_at 1447680_at	9974	0.109	0.1954	No
87	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	9984	0.109	0.1957	No
88	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	10027	0.107	0.1946	No
89	CACNA1G	1423365_at	10186	0.104	0.1880	No
90	SALL1	1450489_at	10593	0.093	0.1700	No
91	ATAD2	1436174_at 1443146_at 1443229_at	10715	0.091	0.1651	No
92	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	10924	0.085	0.1562	No
93	PODN	1435180_at	11313	0.075	0.1389	No
94	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	11372	0.074	0.1367	No
95	REPS2	1435389_at 1446652_at	11377	0.074	0.1371	No
96	FBXO5	1429499_at	11832	0.062	0.1166	No
97	KCNA6	1421568_at 1441049_at 1456954_at	11996	0.058	0.1096	No
98	RPS20	1456373_x_at 1456436_x_at	12290	0.051	0.0965	No
99	PPP1R9B	1447247_at 1447486_at	12818	0.037	0.0725	No
100	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	12861	0.036	0.0708	No
101	MAT2A	1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at	13300	0.024	0.0509	No
102	SLC16A2	1418446_at	13365	0.023	0.0481	No
103	APRIN	1435242_at 1436161_at 1441553_at	13489	0.019	0.0426	No
104	KCND2	1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at	13826	0.009	0.0272	No
105	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	13998	0.004	0.0194	No
106	NR6A1	1421515_at 1421516_at 1428825_at 1428826_at 1445872_at	14041	0.002	0.0175	No
107	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	14290	-0.006	0.0061	No
108	PEG3	1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at	14442	-0.012	-0.0008	No
109	TBX3	1437479_x_at 1439567_at 1444594_at 1445757_at 1448029_at	14626	-0.019	-0.0090	No
110	DLL4	1421826_at 1421827_at	14636	-0.019	-0.0093	No
111	RHD	1417049_at	14748	-0.023	-0.0142	No
112	EVI1	1423011_at 1438325_at	14771	-0.024	-0.0151	No
113	TOPBP1	1452241_at 1458480_at	15055	-0.035	-0.0278	No
114	FANCG	1420960_at	15397	-0.049	-0.0432	No
115	VAMP3	1421102_a_at 1433693_x_at 1433916_at 1437708_x_at 1456245_x_at 1457391_at	15814	-0.070	-0.0618	No
116	ZIC3	1423424_at 1438737_at	15978	-0.080	-0.0687	No
117	FMO4	1425799_at 1444852_at	16077	-0.086	-0.0726	No
118	MXD3	1422970_at 1438847_at 1448878_at	16101	-0.087	-0.0730	No
119	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	16168	-0.091	-0.0754	No
120	EGLN2	1416533_at	16438	-0.108	-0.0870	No
121	DAXX	1419026_at	16511	-0.113	-0.0896	No
122	PLAGL1	1426208_x_at 1438588_at 1450533_a_at	16526	-0.114	-0.0894	No
123	RFC1	1418342_at 1449050_at 1451920_a_at	16578	-0.118	-0.0909	No
124	HNRPA0	1428407_at	16622	-0.122	-0.0920	No
125	KLF5	1430255_at 1451021_a_at 1451739_at	16802	-0.137	-0.0993	No
126	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	16926	-0.146	-0.1039	No
127	PIM1	1423006_at 1435458_at	16948	-0.149	-0.1038	No
128	BRMS1L	1452850_s_at 1460443_at	17056	-0.158	-0.1076	No
129	PPM1D	1434142_at 1449092_at 1459069_at	17334	-0.189	-0.1190	No
130	CASP8AP2	1449217_at	17386	-0.196	-0.1200	No
131	STAG2	1421849_at 1450396_at	17433	-0.202	-0.1207	No
132	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	17594	-0.225	-0.1264	No
133	CDC25A	1417131_at 1417132_at 1445995_at	17656	-0.233	-0.1276	No
134	PRKDC	1451576_at	17660	-0.234	-0.1261	No
135	CENPB	1426051_a_at 1435944_s_at	17733	-0.245	-0.1277	No
136	DDB2	1425706_a_at 1436680_s_at	17878	-0.262	-0.1325	No
137	CCNT2	1427088_at 1427089_at 1435445_at 1452297_at 1453399_at 1457439_at	17918	-0.267	-0.1324	No
138	EIF5A	1437859_x_at 1451470_s_at	18391	-0.339	-0.1517	No
139	ADAMTS2	1435990_at 1455720_at 1457058_at	18807	-0.419	-0.1678	No
140	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	18997	-0.464	-0.1732	No
141	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	19006	-0.466	-0.1703	No
142	MAZ	1427099_at	19064	-0.479	-0.1695	No
143	DDX17	1437773_x_at 1439037_at 1452155_a_at	19116	-0.492	-0.1684	No
144	NHLRC2	1429145_at 1433929_at 1444863_at 1453048_at 1457312_at	19277	-0.528	-0.1720	No
145	FBXL20	1442464_at 1445575_at 1452826_s_at 1456378_s_at	19319	-0.540	-0.1701	No
146	AUTS2	1427293_a_at 1438680_at 1441869_x_at 1442360_at 1443062_at 1443070_at 1443770_x_at 1444069_at 1445307_at 1445469_at 1445538_at 1446849_at 1452379_at 1457139_at 1458592_at 1459338_at	19321	-0.540	-0.1664	No
147	IPO7	1442511_at 1454955_at 1458165_at	19340	-0.545	-0.1634	No
148	NUP153	1441689_at 1441733_s_at 1452176_at	19846	-0.705	-0.1816	No
149	CTCF	1418330_at 1449042_at	19910	-0.726	-0.1794	No
150	ATP6V1D	1416951_a_at 1416952_at 1438993_a_at	19976	-0.751	-0.1771	No
151	CDC45L	1416575_at 1457838_at	20026	-0.772	-0.1739	No
152	RAB11B	1423448_at	20090	-0.799	-0.1712	No
153	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	20101	-0.806	-0.1659	No
154	CTDSP1	1452055_at	20183	-0.843	-0.1637	No
155	NUTF2	1434367_s_at 1447440_at 1449017_at	20257	-0.873	-0.1609	No
156	SLC25A11	1426586_at	20338	-0.912	-0.1582	No
157	USP52	1426700_a_at	20588	-1.049	-0.1622	No
158	H2AFZ	1441370_at	20630	-1.076	-0.1565	No
159	E2F7	1437187_at	20706	-1.134	-0.1520	No
160	DLST	1423710_at 1430161_at 1431011_at 1437775_at	20847	-1.251	-0.1496	No
161	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	20867	-1.271	-0.1416	No
162	AXUD1	1434350_at	21226	-1.744	-0.1457	No
163	NR4A2	1447863_s_at 1450749_a_at 1450750_a_at 1455034_at	21244	-1.774	-0.1340	No
164	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21326	-1.880	-0.1245	No
165	MCM3	1420029_at 1426653_at	21359	-1.933	-0.1123	No
166	SF4	1424381_at 1444699_at	21372	-1.950	-0.0992	No
167	ARID4A	1436191_at 1438464_at 1456420_at	21414	-2.023	-0.0868	No
168	HRBL	1425362_at 1437642_at 1441347_at	21566	-2.335	-0.0773	No
169	ID3	1416630_at	21590	-2.418	-0.0613	No
170	OSBPL7	1428893_at 1459966_at	21622	-2.554	-0.0448	No
171	ZCCHC8	1423755_at 1441639_at	21755	-3.037	-0.0294	No
172	RBBP4	1434892_x_at 1442443_at 1454791_a_at 1454875_a_at 1456260_at	21919	-5.356	0.0008	No