Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F_01
Enrichment Score (ES)	0.51671195
Normalized Enrichment Score (NES)	1.4366225
Nominal p-value	0.029227557
FDR q-value	0.5392658
FWER p-Value	0.979

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HNRPD	1425142_a_at 1446083_at	33	4.652	0.1189	Yes
2	NOLC1	1428869_at 1428870_at 1450087_a_at	110	3.462	0.2050	Yes
3	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	210	2.897	0.2755	Yes
4	AMD1	1448484_at	652	1.704	0.2994	Yes
5	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	665	1.689	0.3426	Yes
6	MYC	1424942_a_at	729	1.605	0.3812	Yes
7	WEE1	1416773_at 1416774_at	812	1.497	0.4162	Yes
8	MCM4	1416214_at 1436708_x_at	896	1.412	0.4490	Yes
9	RANBP1	1422547_at	1269	1.102	0.4605	Yes
10	PRPS1	1416052_at	1386	1.021	0.4816	Yes
11	RFC5	1452917_at	1900	0.786	0.4785	Yes
12	USP2	1417168_a_at 1417169_at	1973	0.758	0.4949	Yes
13	E2F3	1427462_at 1434564_at	2103	0.713	0.5074	Yes
14	AK2	1448450_at 1448451_at	2274	0.659	0.5167	Yes
15	PCNA	1417947_at	2980	0.492	0.4972	No
16	MCM2	1434079_s_at 1448777_at	3383	0.426	0.4899	No
17	E2F1	1417878_at 1431875_a_at 1447840_x_at	3596	0.399	0.4905	No
18	SFMBT1	1422893_at 1422894_at 1443853_x_at	3753	0.381	0.4932	No
19	PCSK1	1421396_at	4475	0.315	0.4684	No
20	SYNGR4	1418875_at	4964	0.284	0.4535	No
21	NLGN3	1456384_at	5477	0.260	0.4368	No
22	HOXC4	1422870_at	6294	0.224	0.4053	No
23	ECEL1	1422586_at	6334	0.222	0.4093	No
24	AP1S1	1416087_at	6847	0.202	0.3911	No
25	NR4A3	1421079_at 1421080_at	7465	0.180	0.3676	No
26	KHSRP	1428174_x_at 1436813_x_at 1452690_at	8328	0.155	0.3322	No
27	RNF121	1426503_a_at 1426504_a_at	8770	0.142	0.3157	No
28	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	10027	0.107	0.2611	No
29	PIK3R3	1445097_at 1447068_at 1456482_at	10269	0.101	0.2527	No
30	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	10924	0.085	0.2250	No
31	FANCC	1442265_at 1447632_at 1450861_at	12368	0.050	0.1604	No
32	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	12861	0.036	0.1389	No
33	RARB	1454906_at	14461	-0.012	0.0661	No
34	BNC2	1438861_at 1440593_at 1459132_at	14743	-0.023	0.0539	No
35	TOPBP1	1452241_at 1458480_at	15055	-0.035	0.0406	No
36	GATA6	1425463_at 1425464_at 1443081_at	15056	-0.035	0.0415	No
37	BRMS1L	1452850_s_at 1460443_at	17056	-0.158	-0.0458	No
38	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	17201	-0.174	-0.0479	No
39	EED	1448653_at	17402	-0.198	-0.0519	No
40	CHD4	1436343_at 1438476_a_at 1451295_a_at	17650	-0.232	-0.0572	No
41	PRKDC	1451576_at	17660	-0.234	-0.0515	No
42	LZTS2	1426409_at	17763	-0.247	-0.0498	No
43	H2AFX	1416746_at	18043	-0.284	-0.0552	No
44	CASP2	1448165_at	18301	-0.325	-0.0585	No
45	CHD6	1427384_at 1431047_at	18673	-0.391	-0.0654	No
46	ADNP	1423069_at	18957	-0.454	-0.0666	No
47	ALDH6A1	1448104_at	19125	-0.495	-0.0614	No
48	PTBP2	1423470_at 1423471_at 1444746_at 1446490_at 1458757_at	20523	-1.009	-0.0991	No
49	E2F7	1437187_at	20706	-1.134	-0.0781	No
50	PPP1R10	1426726_at 1426727_s_at 1430560_at	20811	-1.226	-0.0511	No
51	MCM3	1420029_at 1426653_at	21359	-1.933	-0.0260	No
52	ARID4A	1436191_at 1438464_at 1456420_at	21414	-2.023	0.0239	No