Details for gene set V$E2F1_Q6

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F1_Q6_01
Enrichment Score (ES)	0.45000318
Normalized Enrichment Score (NES)	1.485996
Nominal p-value	0.007874016
FDR q-value	0.62785745
FWER p-Value	0.862

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HNRPD	1425142_a_at 1446083_at	33	4.652	0.0371	Yes
2	CDCA7	1428069_at 1445681_at	66	3.948	0.0684	Yes
3	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	87	3.668	0.0979	Yes
4	NOLC1	1428869_at 1428870_at 1450087_a_at	110	3.462	0.1256	Yes
5	POLA2	1425794_at 1448369_at 1456713_at	120	3.359	0.1531	Yes
6	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	123	3.348	0.1808	Yes
7	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	183	3.021	0.2032	Yes
8	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	210	2.897	0.2260	Yes
9	MCM6	1416251_at 1438852_x_at 1447756_x_at	293	2.536	0.2433	Yes
10	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	428	2.140	0.2549	Yes
11	AMD1	1448484_at	652	1.704	0.2588	Yes
12	SYT6	1420188_at 1426106_a_at 1449766_at 1449767_x_at	664	1.690	0.2723	Yes
13	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	665	1.689	0.2863	Yes
14	MYC	1424942_a_at	729	1.605	0.2967	Yes
15	RAD51	1418281_at	783	1.536	0.3071	Yes
16	WEE1	1416773_at 1416774_at	812	1.497	0.3182	Yes
17	UNG	1425753_a_at	836	1.476	0.3294	Yes
18	ATP5G2	1415980_at 1456128_at	878	1.426	0.3393	Yes
19	MCM4	1416214_at 1436708_x_at	896	1.412	0.3503	Yes
20	POLE2	1427094_at 1431440_at	991	1.311	0.3568	Yes
21	PHF5A	1424170_at	1109	1.206	0.3615	Yes
22	GMNN	1417506_at	1266	1.104	0.3635	Yes
23	RANBP1	1422547_at	1269	1.102	0.3725	Yes
24	ESPL1	1433862_at	1270	1.102	0.3817	Yes
25	PRPS1	1416052_at	1386	1.021	0.3849	Yes
26	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	1410	1.011	0.3922	Yes
27	ILF3	1422546_at 1436802_at 1460669_at	1711	0.873	0.3857	Yes
28	RQCD1	1450887_at	1777	0.841	0.3896	Yes
29	SLC25A1	1428190_at	1843	0.815	0.3934	Yes
30	USP2	1417168_a_at 1417169_at	1973	0.758	0.3938	Yes
31	EZH2	1416544_at 1444263_at	2029	0.737	0.3974	Yes
32	UXT	1418986_a_at	2030	0.737	0.4035	Yes
33	CLSPN	1441984_at 1456280_at	2089	0.718	0.4068	Yes
34	E2F3	1427462_at 1434564_at	2103	0.713	0.4121	Yes
35	DNAJC9	1426473_at	2208	0.681	0.4130	Yes
36	AK2	1448450_at 1448451_at	2274	0.659	0.4155	Yes
37	MRPL40	1448849_at	2285	0.656	0.4205	Yes
38	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	2337	0.640	0.4234	Yes
39	RPL18	1437005_a_at 1450372_a_at	2347	0.636	0.4283	Yes
40	UFD1L	1418087_at 1432367_a_at	2498	0.595	0.4263	Yes
41	LRP1	1442849_at 1448655_at	2605	0.572	0.4262	Yes
42	MSH2	1416988_at 1447888_x_at	2634	0.567	0.4296	Yes
43	INSM1	1421399_at 1455865_at	2652	0.562	0.4335	Yes
44	PPRC1	1426381_at	2677	0.556	0.4370	Yes
45	CDC5L	1428092_at 1460429_at	2707	0.547	0.4402	Yes
46	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	2708	0.547	0.4448	Yes
47	FAF1	1418242_at 1434370_s_at	2788	0.528	0.4455	Yes
48	SLC9A5	1420070_a_at 1455760_at	2876	0.513	0.4458	Yes
49	JPH1	1421520_at 1438428_at	2910	0.506	0.4485	Yes
50	PCNA	1417947_at	2980	0.492	0.4494	Yes
51	MCM8	1429557_at	3109	0.467	0.4474	Yes
52	RPS19	1449243_a_at 1460442_at	3166	0.459	0.4486	Yes
53	ORC1L	1422663_at 1443172_at	3218	0.449	0.4500	Yes
54	MCM2	1434079_s_at 1448777_at	3383	0.426	0.4460	No
55	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	3466	0.414	0.4457	No
56	E2F1	1417878_at 1431875_a_at 1447840_x_at	3596	0.399	0.4431	No
57	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	3711	0.386	0.4410	No
58	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	4004	0.353	0.4305	No
59	GPRC5B	1424613_at 1451411_at	4122	0.343	0.4280	No
60	AP4M1	1418846_at	4232	0.335	0.4258	No
61	PCSK1	1421396_at	4475	0.315	0.4173	No
62	FZD1	1422985_at 1437284_at	4504	0.312	0.4186	No
63	ERF	1422114_at 1435561_at	4585	0.306	0.4174	No
64	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	4647	0.303	0.4171	No
65	ARHGAP11A	1438434_at	4651	0.302	0.4195	No
66	SYNGR4	1418875_at	4964	0.284	0.4075	No
67	PAQR4	1423101_at	5282	0.269	0.3952	No
68	STMN1	1415849_s_at	5579	0.255	0.3837	No
69	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	5692	0.249	0.3806	No
70	PTMA	1423455_at	5941	0.238	0.3712	No
71	HMGN2	1433507_a_at	6108	0.230	0.3655	No
72	ACTN3	1418677_at	6299	0.224	0.3586	No
73	GADD45B	1420197_at 1449773_s_at 1450971_at	6373	0.220	0.3571	No
74	PKMYT1	1418481_at 1438601_at	6385	0.220	0.3584	No
75	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	6826	0.203	0.3399	No
76	AP1S1	1416087_at	6847	0.202	0.3407	No
77	ENPP1	1419276_at 1459546_s_at	6896	0.200	0.3401	No
78	PHF15	1430081_at 1455345_at	7124	0.192	0.3313	No
79	GATA1	1449232_at	7358	0.184	0.3221	No
80	DHH	1422127_at 1434959_at	7651	0.175	0.3101	No
81	KCNS2	1421342_at 1441211_at 1457325_at	7813	0.170	0.3041	No
82	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	9129	0.132	0.2448	No
83	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	9984	0.109	0.2065	No
84	BMP2	1423635_at	10047	0.107	0.2045	No
85	STK35	1431107_at 1439802_at	10292	0.101	0.1942	No
86	FHOD1	1435557_at	10486	0.096	0.1861	No
87	ATAD2	1436174_at 1443146_at 1443229_at	10715	0.091	0.1764	No
88	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	10924	0.085	0.1675	No
89	IRX3	1418517_at	11251	0.077	0.1532	No
90	HR	1422110_at 1435950_at	11295	0.076	0.1518	No
91	PODN	1435180_at	11313	0.075	0.1517	No
92	IGSF4D	1435145_at 1435146_s_at 1435147_x_at 1436743_at 1440412_at 1444664_at 1459761_x_at	11339	0.075	0.1512	No
93	REPS2	1435389_at 1446652_at	11377	0.074	0.1501	No
94	HOXC10	1439798_at	11601	0.067	0.1404	No
95	FBXO5	1429499_at	11832	0.062	0.1303	No
96	TNF	1419607_at	11889	0.060	0.1283	No
97	FANCC	1442265_at 1447632_at 1450861_at	12368	0.050	0.1067	No
98	RAVER1	1427110_at 1427111_s_at 1444966_at	13140	0.029	0.0715	No
99	GNG4	1417943_at 1417944_at 1447669_s_at	13278	0.025	0.0654	No
100	YBX2	1420762_a_at	13680	0.013	0.0471	No
101	MYH10	1441057_at 1452740_at	13934	0.005	0.0355	No
102	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	14290	-0.006	0.0193	No
103	NPAT	1456485_at 1459185_at	14669	-0.020	0.0021	No
104	ATM	1421205_at 1428830_at	14971	-0.032	-0.0115	No
105	TOPBP1	1452241_at 1458480_at	15055	-0.035	-0.0150	No
106	HMGA2	1422851_at 1443394_at 1446196_at 1450780_s_at 1450781_at 1458241_at	15224	-0.042	-0.0224	No
107	FANCG	1420960_at	15397	-0.049	-0.0299	No
108	TYRO3	1425248_a_at 1425249_a_at	15439	-0.051	-0.0313	No
109	DNAJC5G	1437814_at	15523	-0.055	-0.0347	No
110	RB1CC1	1418968_at 1431605_at 1449292_at	15632	-0.061	-0.0391	No
111	MGAT2	1426350_at 1452037_at	15856	-0.073	-0.0488	No
112	MXD3	1422970_at 1438847_at 1448878_at	16101	-0.087	-0.0592	No
113	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	16144	-0.089	-0.0604	No
114	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	16168	-0.091	-0.0607	No
115	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	16532	-0.115	-0.0765	No
116	TMEM15	1424366_at	16583	-0.119	-0.0778	No
117	KLF5	1430255_at 1451021_a_at 1451739_at	16802	-0.137	-0.0867	No
118	TCF8	1418926_at 1420243_at 1443005_at 1443203_at 1446127_at 1456686_at	16873	-0.142	-0.0887	No
119	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	16926	-0.146	-0.0899	No
120	SMARCA1	1460292_a_at	16955	-0.149	-0.0899	No
121	BRMS1L	1452850_s_at 1460443_at	17056	-0.158	-0.0932	No
122	PCDH10	1421311_at 1425563_s_at 1430667_at 1438134_at 1442565_at 1444301_at	17132	-0.166	-0.0953	No
123	CNOT3	1435965_at 1441465_at	17242	-0.179	-0.0988	No
124	POU2F1	1419716_a_at 1427695_a_at 1427835_at	17257	-0.180	-0.0979	No
125	HCN3	1451023_at	17304	-0.186	-0.0985	No
126	PPM1D	1434142_at 1449092_at 1459069_at	17334	-0.189	-0.0983	No
127	CASP8AP2	1449217_at	17386	-0.196	-0.0990	No
128	EED	1448653_at	17402	-0.198	-0.0980	No
129	STAG2	1421849_at 1450396_at	17433	-0.202	-0.0977	No
130	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	17594	-0.225	-0.1032	No
131	CHD4	1436343_at 1438476_a_at 1451295_a_at	17650	-0.232	-0.1038	No
132	CDC25A	1417131_at 1417132_at 1445995_at	17656	-0.233	-0.1021	No
133	PRKDC	1451576_at	17660	-0.234	-0.1003	No
134	SPHK2	1417431_a_at 1426230_at	17820	-0.254	-0.1055	No
135	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	17835	-0.256	-0.1040	No
136	DDB2	1425706_a_at 1436680_s_at	17878	-0.262	-0.1038	No
137	SP1	1418180_at 1448994_at 1454852_at	17912	-0.267	-0.1031	No
138	NUMA1	1423974_at 1423975_s_at 1441090_at 1444576_at 1444577_x_at	18114	-0.296	-0.1099	No
139	CASP2	1448165_at	18301	-0.325	-0.1157	No
140	USP37	1434242_at 1438212_at	18470	-0.352	-0.1205	No
141	CCNT1	1419313_at 1456477_at	18518	-0.359	-0.1197	No
142	PHF13	1455175_at	18589	-0.373	-0.1198	No
143	HNRPUL1	1451984_at	18655	-0.387	-0.1196	No
144	ADAMTS2	1435990_at 1455720_at 1457058_at	18807	-0.419	-0.1230	No
145	TBX6	1449868_at	18856	-0.431	-0.1217	No
146	ACBD6	1452601_a_at 1453199_at	18993	-0.463	-0.1241	No
147	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	18997	-0.464	-0.1204	No
148	MAZ	1427099_at	19064	-0.479	-0.1194	No
149	DDX17	1437773_x_at 1439037_at 1452155_a_at	19116	-0.492	-0.1177	No
150	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	19152	-0.500	-0.1151	No
151	IPO7	1442511_at 1454955_at 1458165_at	19340	-0.545	-0.1192	No
152	DLEU2	1427410_at 1427411_s_at 1456145_at	19486	-0.587	-0.1210	No
153	ACO2	1436934_s_at 1442102_at 1451002_at	19611	-0.623	-0.1215	No
154	CTCF	1418330_at 1449042_at	19910	-0.726	-0.1292	No
155	CDC45L	1416575_at 1457838_at	20026	-0.772	-0.1281	No
156	NCOA6	1423374_at	20045	-0.779	-0.1224	No
157	RAB11B	1423448_at	20090	-0.799	-0.1178	No
158	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	20101	-0.806	-0.1116	No
159	PPP1R8	1424554_at 1435821_s_at	20171	-0.838	-0.1078	No
160	TRIM39	1418851_at	20587	-1.049	-0.1182	No
161	USP52	1426700_a_at	20588	-1.049	-0.1095	No
162	HNRPR	1427129_a_at 1438807_at 1452030_a_at	20768	-1.190	-0.1078	No
163	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	20867	-1.271	-0.1018	No
164	KBTBD7	1428192_at 1439865_at 1452700_s_at	21353	-1.923	-0.1081	No
165	MCM3	1420029_at 1426653_at	21359	-1.933	-0.0923	No
166	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	21476	-2.135	-0.0799	No
167	PIK3CD	1422991_at 1422992_s_at 1443798_at 1453281_at 1458321_at	21492	-2.164	-0.0626	No
168	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	21518	-2.216	-0.0454	No
169	ID3	1416630_at	21590	-2.418	-0.0286	No
170	FLI1	1422024_at 1433512_at 1441584_at	21654	-2.665	-0.0093	No
171	MTSS1	1424826_s_at 1434036_at 1440847_at 1443729_at 1446284_at 1451496_at	21656	-2.681	0.0129	No