Details for gene set V$E2F1_Q4

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F1_Q4_01
Enrichment Score (ES)	0.40821907
Normalized Enrichment Score (NES)	1.3357468
Nominal p-value	0.022680413
FDR q-value	0.3536739
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HNRPD	1425142_a_at 1446083_at	33	4.652	0.0335	Yes
2	CDCA7	1428069_at 1445681_at	66	3.948	0.0618	Yes
3	DPYSL2	1433770_at 1450502_at 1458188_at 1458632_at	101	3.510	0.0866	Yes
4	BMP7	1418910_at 1432410_a_at	107	3.485	0.1126	Yes
5	HOXA9	1421579_at 1455626_at	116	3.390	0.1378	Yes
6	POLA2	1425794_at 1448369_at 1456713_at	120	3.359	0.1630	Yes
7	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	123	3.348	0.1881	Yes
8	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	183	3.021	0.2081	Yes
9	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	210	2.897	0.2287	Yes
10	USP1	1423674_at 1423675_at 1451080_at	229	2.819	0.2491	Yes
11	MCM6	1416251_at 1438852_x_at 1447756_x_at	293	2.536	0.2653	Yes
12	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	428	2.140	0.2753	Yes
13	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	665	1.689	0.2772	Yes
14	MYC	1424942_a_at	729	1.605	0.2864	Yes
15	ELAVL2	1421881_a_at 1421882_a_at 1421883_at 1433052_at	741	1.591	0.2978	Yes
16	RAD51	1418281_at	783	1.536	0.3075	Yes
17	WEE1	1416773_at 1416774_at	812	1.497	0.3175	Yes
18	UNG	1425753_a_at	836	1.476	0.3276	Yes
19	ATP5G2	1415980_at 1456128_at	878	1.426	0.3364	Yes
20	MCM4	1416214_at 1436708_x_at	896	1.412	0.3463	Yes
21	POLE2	1427094_at 1431440_at	991	1.311	0.3518	Yes
22	HMGA1	1416184_s_at	1159	1.173	0.3530	Yes
23	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	1191	1.151	0.3602	Yes
24	GMNN	1417506_at	1266	1.104	0.3651	Yes
25	RANBP1	1422547_at	1269	1.102	0.3733	Yes
26	CDC6	1417019_a_at	1359	1.045	0.3771	Yes
27	PRPS1	1416052_at	1386	1.021	0.3836	Yes
28	IMPDH2	1415851_a_at 1415852_at	1409	1.012	0.3902	Yes
29	ITGA1	1439713_at 1446569_at 1455251_at	1440	0.998	0.3964	Yes
30	KPNB1	1416925_at 1434357_a_at 1448526_at 1451967_x_at	1504	0.964	0.4007	Yes
31	MELK	1416558_at	1576	0.933	0.4045	Yes
32	USP2	1417168_a_at 1417169_at	1973	0.758	0.3920	Yes
33	EZH2	1416544_at 1444263_at	2029	0.737	0.3950	Yes
34	UXT	1418986_a_at	2030	0.737	0.4006	Yes
35	SEMA5A	1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at	2041	0.733	0.4057	Yes
36	E2F3	1427462_at 1434564_at	2103	0.713	0.4082	Yes
37	NUP155	1418727_at 1449200_at	2256	0.666	0.4063	No
38	UFD1L	1418087_at 1432367_a_at	2498	0.595	0.3997	No
39	INSM1	1421399_at 1455865_at	2652	0.562	0.3969	No
40	PPRC1	1426381_at	2677	0.556	0.4000	No
41	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	2708	0.547	0.4027	No
42	JPH1	1421520_at 1438428_at	2910	0.506	0.3973	No
43	PCNA	1417947_at	2980	0.492	0.3978	No
44	MCM8	1429557_at	3109	0.467	0.3955	No
45	RPS19	1449243_a_at 1460442_at	3166	0.459	0.3963	No
46	MCM2	1434079_s_at 1448777_at	3383	0.426	0.3896	No
47	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	3396	0.424	0.3923	No
48	E2F1	1417878_at 1431875_a_at 1447840_x_at	3596	0.399	0.3861	No
49	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	4004	0.353	0.3701	No
50	AP4M1	1418846_at	4232	0.335	0.3622	No
51	PCSK1	1421396_at	4475	0.315	0.3534	No
52	ERF	1422114_at 1435561_at	4585	0.306	0.3507	No
53	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	4647	0.303	0.3502	No
54	ARHGAP11A	1438434_at	4651	0.302	0.3524	No
55	PAQR4	1423101_at	5282	0.269	0.3254	No
56	STMN1	1415849_s_at	5579	0.255	0.3138	No
57	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	5692	0.249	0.3105	No
58	PTMA	1423455_at	5941	0.238	0.3009	No
59	GLRA3	1450239_at	5985	0.236	0.3007	No
60	HMGN2	1433507_a_at	6108	0.230	0.2968	No
61	RALY	1418573_a_at	6225	0.226	0.2932	No
62	PKMYT1	1418481_at 1438601_at	6385	0.220	0.2876	No
63	DCLRE1A	1417904_at 1432097_a_at 1442329_at	6548	0.214	0.2817	No
64	EPHB1	1455188_at	6800	0.204	0.2718	No
65	PHF15	1430081_at 1455345_at	7124	0.192	0.2584	No
66	DHX40	1428267_at 1457839_at	7313	0.185	0.2511	No
67	UCHL1	1448260_at	7615	0.175	0.2386	No
68	NR3C2	1435991_at 1440306_at 1442533_at	8511	0.149	0.1986	No
69	PCDH7	1427592_at 1437442_at 1449249_at 1456214_at	8577	0.147	0.1968	No
70	NDUFA11	1429708_at 1444154_at	9455	0.123	0.1574	No
71	DMRT1	1423582_at	9579	0.120	0.1527	No
72	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	9984	0.109	0.1349	No
73	PIK3R3	1445097_at 1447068_at 1456482_at	10269	0.101	0.1226	No
74	STK35	1431107_at 1439802_at	10292	0.101	0.1224	No
75	NEGR1	1439303_at 1446279_at 1456392_at 1459126_at	10342	0.100	0.1209	No
76	NRP2	1425433_a_at 1426528_at 1435349_at 1452552_at 1456778_at 1459256_at	10474	0.097	0.1156	No
77	SALL1	1450489_at	10593	0.093	0.1109	No
78	ATAD2	1436174_at 1443146_at 1443229_at	10715	0.091	0.1060	No
79	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	10924	0.085	0.0971	No
80	PODN	1435180_at	11313	0.075	0.0799	No
81	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	11372	0.074	0.0777	No
82	CHGB	1415885_at	11429	0.072	0.0757	No
83	HOXC10	1439798_at	11601	0.067	0.0684	No
84	SLC6A4	1417150_at	11642	0.067	0.0670	No
85	FBXO5	1429499_at	11832	0.062	0.0588	No
86	KCNA6	1421568_at 1441049_at 1456954_at	11996	0.058	0.0518	No
87	FANCC	1442265_at 1447632_at 1450861_at	12368	0.050	0.0351	No
88	YWHAQ	1420828_s_at 1420829_a_at 1420830_x_at 1432842_s_at 1437608_x_at 1454378_at 1460590_s_at 1460621_x_at	12435	0.048	0.0324	No
89	PPP1R9B	1447247_at 1447486_at	12818	0.037	0.0152	No
90	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	12861	0.036	0.0135	No
91	MAT2A	1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at	13300	0.024	-0.0064	No
92	SLC16A2	1418446_at	13365	0.023	-0.0092	No
93	YBX2	1420762_a_at	13680	0.013	-0.0235	No
94	KCND2	1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at	13826	0.009	-0.0301	No
95	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	13998	0.004	-0.0379	No
96	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	14290	-0.006	-0.0512	No
97	SLC38A1	1415903_at 1454764_s_at	14568	-0.017	-0.0638	No
98	PELO	1434071_a_at	14625	-0.019	-0.0663	No
99	RHD	1417049_at	14748	-0.023	-0.0717	No
100	TOPBP1	1452241_at 1458480_at	15055	-0.035	-0.0855	No
101	FANCG	1420960_at	15397	-0.049	-0.1008	No
102	DNAJC5G	1437814_at	15523	-0.055	-0.1061	No
103	FMO4	1425799_at 1444852_at	16077	-0.086	-0.1309	No
104	MXD3	1422970_at 1438847_at 1448878_at	16101	-0.087	-0.1313	No
105	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	16168	-0.091	-0.1336	No
106	DAXX	1419026_at	16511	-0.113	-0.1485	No
107	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	16532	-0.115	-0.1485	No
108	RFC1	1418342_at 1449050_at 1451920_a_at	16578	-0.118	-0.1497	No
109	TMEM15	1424366_at	16583	-0.119	-0.1490	No
110	KLF5	1430255_at 1451021_a_at 1451739_at	16802	-0.137	-0.1580	No
111	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	16926	-0.146	-0.1625	No
112	PIM1	1423006_at 1435458_at	16948	-0.149	-0.1624	No
113	BRMS1L	1452850_s_at 1460443_at	17056	-0.158	-0.1661	No
114	CASP8AP2	1449217_at	17386	-0.196	-0.1797	No
115	STAG2	1421849_at 1450396_at	17433	-0.202	-0.1803	No
116	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	17594	-0.225	-0.1860	No
117	CDC25A	1417131_at 1417132_at 1445995_at	17656	-0.233	-0.1870	No
118	PRKDC	1451576_at	17660	-0.234	-0.1854	No
119	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	17835	-0.256	-0.1914	No
120	DDB2	1425706_a_at 1436680_s_at	17878	-0.262	-0.1914	No
121	CCNT2	1427088_at 1427089_at 1435445_at 1452297_at 1453399_at 1457439_at	17918	-0.267	-0.1912	No
122	NUMA1	1423974_at 1423975_s_at 1441090_at 1444576_at 1444577_x_at	18114	-0.296	-0.1979	No
123	CASP2	1448165_at	18301	-0.325	-0.2040	No
124	PHF13	1455175_at	18589	-0.373	-0.2144	No
125	ADAMTS2	1435990_at 1455720_at 1457058_at	18807	-0.419	-0.2212	No
126	TBX6	1449868_at	18856	-0.431	-0.2201	No
127	ACBD6	1452601_a_at 1453199_at	18993	-0.463	-0.2229	No
128	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	18997	-0.464	-0.2195	No
129	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	19006	-0.466	-0.2164	No
130	MAZ	1427099_at	19064	-0.479	-0.2154	No
131	DDX17	1437773_x_at 1439037_at 1452155_a_at	19116	-0.492	-0.2141	No
132	TLE4	1425650_at 1430384_at 1450853_at	19164	-0.503	-0.2124	No
133	NHLRC2	1429145_at 1433929_at 1444863_at 1453048_at 1457312_at	19277	-0.528	-0.2136	No
134	FBXL20	1442464_at 1445575_at 1452826_s_at 1456378_s_at	19319	-0.540	-0.2114	No
135	IPO7	1442511_at 1454955_at 1458165_at	19340	-0.545	-0.2082	No
136	PIK3R4	1460352_s_at	19442	-0.574	-0.2085	No
137	NUP153	1441689_at 1441733_s_at 1452176_at	19846	-0.705	-0.2217	No
138	CTCF	1418330_at 1449042_at	19910	-0.726	-0.2192	No
139	GATA3	1448886_at	19953	-0.743	-0.2155	No
140	CDC45L	1416575_at 1457838_at	20026	-0.772	-0.2130	No
141	NCOA6	1423374_at	20045	-0.779	-0.2080	No
142	RAB11B	1423448_at	20090	-0.799	-0.2040	No
143	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	20101	-0.806	-0.1984	No
144	PPP1R8	1424554_at 1435821_s_at	20171	-0.838	-0.1952	No
145	RBPSUH	1418114_at 1438848_at 1446436_at 1448957_at 1454896_at	20177	-0.841	-0.1891	No
146	TNPO2	1425592_at 1425593_at 1437283_at	20429	-0.961	-0.1934	No
147	USP52	1426700_a_at	20588	-1.049	-0.1928	No
148	H2AFZ	1441370_at	20630	-1.076	-0.1865	No
149	JMJD1A	1426810_at	20644	-1.089	-0.1789	No
150	FBXO9	1417480_at 1432211_a_at	20781	-1.201	-0.1761	No
151	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	20867	-1.271	-0.1705	No
152	AXUD1	1434350_at	21226	-1.744	-0.1738	No
153	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21326	-1.880	-0.1642	No
154	KBTBD7	1428192_at 1439865_at 1452700_s_at	21353	-1.923	-0.1509	No
155	MCM3	1420029_at 1426653_at	21359	-1.933	-0.1366	No
156	ARID4A	1436191_at 1438464_at 1456420_at	21414	-2.023	-0.1238	No
157	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	21476	-2.135	-0.1105	No
158	HRBL	1425362_at 1437642_at 1441347_at	21566	-2.335	-0.0970	No
159	ID3	1416630_at	21590	-2.418	-0.0799	No
160	OSBPL7	1428893_at 1459966_at	21622	-2.554	-0.0621	No
161	ATRX	1420945_at 1420946_at 1420947_at 1438750_at 1441014_at 1441771_at 1450051_at 1453734_at 1456832_at	21648	-2.653	-0.0433	No
162	ZCCHC8	1423755_at 1441639_at	21755	-3.037	-0.0253	No
163	EGR3	1421486_at 1436329_at	21895	-4.452	0.0019	No