Details for gene set V$ATF6

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$ATF6_01
Enrichment Score (ES)	-0.5119387
Normalized Enrichment Score (NES)	-1.5760503
Nominal p-value	0.008163265
FDR q-value	0.11038021
FWER p-Value	0.548

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TNKS2	1428388_at 1437793_at 1447522_s_at 1452772_at 1457468_at	217	2.862	0.0326	No
2	LMO4	1420981_a_at 1439651_at	439	2.111	0.0538	No
3	KLF13	1432543_a_at 1456030_at	556	1.855	0.0760	No
4	ARMCX2	1415780_a_at 1437849_x_at 1456739_x_at	738	1.593	0.0914	No
5	MRPS18B	1451164_a_at	905	1.403	0.1047	No
6	RAB2	1418621_at 1418622_at 1418623_at 1419945_s_at 1419946_s_at 1436477_x_at 1449676_at	984	1.315	0.1206	No
7	EIF4A1	1427058_at 1430980_a_at 1434985_a_at	1492	0.969	0.1118	No
8	USP2	1417168_a_at 1417169_at	1973	0.758	0.1011	No
9	GFRA1	1421973_at 1439015_at 1450440_at	2038	0.735	0.1091	No
10	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	2273	0.660	0.1081	No
11	NPTX1	1422130_at 1434877_at	2356	0.635	0.1138	No
12	PTOV1	1416945_at 1438058_s_at 1458357_x_at	2597	0.573	0.1114	No
13	GCC1	1424799_a_at 1429033_at	2776	0.530	0.1111	No
14	STAT3	1424272_at 1426587_a_at 1459961_a_at 1460700_at	2871	0.513	0.1144	No
15	KDELR3	1418538_at	3066	0.474	0.1126	No
16	TPM4	1433883_at	3075	0.473	0.1192	No
17	TRPC1	1421095_a_at 1421096_at	3190	0.454	0.1207	No
18	GOLGB1	1433135_at 1435032_at 1460535_at	3498	0.410	0.1128	No
19	TBX20	1422219_a_at 1425158_at 1453351_at	4211	0.336	0.0852	No
20	ERF	1422114_at 1435561_at	4585	0.306	0.0726	No
21	FLNC	1424063_at 1447812_x_at 1449073_at	4930	0.286	0.0611	No
22	LMX1B	1421769_at	5456	0.261	0.0410	No
23	SLC39A5	1429523_a_at	7042	0.195	-0.0287	No
24	TWIST1	1418733_at	7102	0.193	-0.0285	No
25	DHX40	1428267_at 1457839_at	7313	0.185	-0.0354	No
26	GRIA3	1420563_at 1434728_at	8463	0.151	-0.0857	No
27	HOXB9	1452317_at	8545	0.148	-0.0872	No
28	NTRK2	1420837_at 1420838_at 1435196_at 1435305_at 1437560_at 1446712_at	8781	0.141	-0.0959	No
29	SRP19	1450891_at	9103	0.132	-0.1086	No
30	LHX5	1420348_at	9565	0.120	-0.1279	No
31	XPNPEP1	1422443_at	9576	0.120	-0.1266	No
32	HCRTR2	1444223_at	9695	0.117	-0.1303	No
33	LENG9	1440190_at 1440191_s_at 1455497_at	10192	0.103	-0.1515	No
34	ADAMTS3	1441693_at 1458143_at	10366	0.099	-0.1579	No
35	IRX3	1418517_at	11251	0.077	-0.1972	No
36	TPT1	1416642_a_at 1416643_at	11451	0.072	-0.2053	No
37	PITX2	1424797_a_at 1450482_a_at	11807	0.063	-0.2206	No
38	KCNA6	1421568_at 1441049_at 1456954_at	11996	0.058	-0.2283	No
39	GRIN2B	1422223_at 1431700_at	12231	0.053	-0.2383	No
40	GSC	1421412_at	12889	0.036	-0.2678	No
41	GNG4	1417943_at 1417944_at 1447669_s_at	13278	0.025	-0.2852	No
42	ETV6	1423401_at 1434880_at 1444598_at 1457944_at	13505	0.019	-0.2953	No
43	SLC22A17	1448209_a_at	13534	0.018	-0.2963	No
44	LHX1	1421951_at 1450428_at	14300	-0.007	-0.3312	No
45	DUSP4	1428834_at	14511	-0.015	-0.3406	No
46	IL1RAPL1	1445821_at 1458964_at	14520	-0.015	-0.3407	No
47	GDNF	1419080_at	14609	-0.018	-0.3445	No
48	KDELR2	1417204_at 1417205_at	14893	-0.029	-0.3570	No
49	NKX2-2	1421112_at	15147	-0.039	-0.3680	No
50	C1QTNF7	1429030_at 1460163_at	15214	-0.042	-0.3704	No
51	TYRO3	1425248_a_at 1425249_a_at	15439	-0.051	-0.3799	No
52	PAX1	1449359_at	15673	-0.063	-0.3896	No
53	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	16144	-0.089	-0.4098	No
54	NOL4	1430189_at 1441447_at 1456387_at	16211	-0.093	-0.4115	No
55	KDELR1	1460211_a_at	16478	-0.111	-0.4220	No
56	SYT11	1429314_at 1429315_at 1429729_at 1436176_at 1449264_at 1455176_a_at	17004	-0.154	-0.4437	No
57	GRB2	1418508_a_at 1449111_a_at	17171	-0.170	-0.4488	No
58	SCYL1	1430354_x_at 1436804_s_at 1451051_a_at	17528	-0.216	-0.4619	No
59	SLC30A5	1422497_at	17626	-0.229	-0.4629	No
60	ATBF1	1420649_at 1420650_at 1429725_at 1445941_at 1446094_at 1449947_s_at 1453267_at 1460006_at	17910	-0.266	-0.4719	No
61	SP1	1418180_at 1448994_at 1454852_at	17912	-0.267	-0.4680	No
62	PER1	1449851_at	17965	-0.273	-0.4664	No
63	SLC39A13	1423926_at	18266	-0.321	-0.4753	No
64	SEC24D	1426972_at 1458821_at	18641	-0.385	-0.4867	No
65	NANS	1417773_at 1417774_at	18753	-0.405	-0.4858	No
66	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	19006	-0.466	-0.4904	No
67	PHC1	1423212_at	19047	-0.474	-0.4852	No
68	BRD2	1423502_at 1437210_a_at	19206	-0.512	-0.4848	No
69	OSBP	1460350_at	19799	-0.685	-0.5018	Yes
70	SEMA3B	1416644_a_at 1431795_a_at 1448415_a_at	19906	-0.723	-0.4959	Yes
71	SH2D2A	1449105_at	19969	-0.749	-0.4876	Yes
72	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	20101	-0.806	-0.4816	Yes
73	SEC23A	1423347_at	20141	-0.821	-0.4712	Yes
74	TRIM39	1418851_at	20587	-1.049	-0.4760	Yes
75	ELF1	1417540_at 1439319_at	20751	-1.172	-0.4661	Yes
76	PPP1R10	1426726_at 1426727_s_at 1430560_at	20811	-1.226	-0.4506	Yes
77	DLST	1423710_at 1430161_at 1431011_at 1437775_at	20847	-1.251	-0.4336	Yes
78	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	20867	-1.271	-0.4156	Yes
79	TLOC1	1432635_a_at 1433704_s_at 1439233_at 1444811_at 1454697_at 1455698_at	20969	-1.378	-0.3998	Yes
80	MADD	1425735_at 1455502_at	21049	-1.476	-0.3815	Yes
81	CREM	1418322_at 1430598_at 1430847_a_at 1449037_at	21125	-1.586	-0.3613	Yes
82	RAB6IP1	1424015_at	21270	-1.802	-0.3412	Yes
83	NR4A1	1416505_at	21281	-1.819	-0.3146	Yes
84	GBF1	1415709_s_at 1415757_at 1432677_at 1438207_at	21410	-2.011	-0.2906	Yes
85	ICA1	1417901_a_at 1431644_a_at	21461	-2.111	-0.2616	Yes
86	RORC	1425792_a_at 1425793_a_at	21714	-2.867	-0.2305	Yes
87	EGR1	1417065_at	21834	-3.545	-0.1833	Yes
88	EGR2	1427682_a_at 1427683_at	21875	-4.015	-0.1256	Yes
89	ARF4	1423052_at 1423053_at 1434074_x_at 1439367_x_at 1442905_at 1457348_at	21884	-4.186	-0.0638	Yes
90	EGR3	1421486_at 1436329_at	21895	-4.452	0.0019	Yes