Details for gene set VANTVEER_BREAST_OUTCOME_GOOD_VS_POOR

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	VANTVEER_BREAST_OUTCOME_GOOD_VS_POOR_DN
Enrichment Score (ES)	0.6610793
Normalized Enrichment Score (NES)	1.9034319
Nominal p-value	0.0
FDR q-value	0.0028295047
FWER p-Value	0.033

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	GMPS	1433567_at 1435656_at 1455057_at	32	4.674	0.0902	Yes
2	MAPRE2	1426244_at 1426245_s_at 1438352_at 1442553_at 1445492_at 1451989_a_at 1451990_at	72	3.846	0.1639	Yes
3	ASNS	1433966_x_at 1451095_at	97	3.538	0.2322	Yes
4	MCM6	1416251_at 1438852_x_at 1447756_x_at	293	2.536	0.2730	Yes
5	ADM	1416077_at 1447839_x_at	403	2.207	0.3113	Yes
6	TRIP13	1429294_at 1429295_s_at 1446760_at	475	2.030	0.3479	Yes
7	CENPA	1441864_x_at 1444416_at 1450842_a_at	599	1.779	0.3772	Yes
8	TFRC	1422966_a_at 1422967_a_at 1452661_at AFFX-TransRecMur/X57349_3_at AFFX-TransRecMur/X57349_5_at AFFX-TransRecMur/X57349_M_at	611	1.759	0.4112	Yes
9	TK1	1416258_at	730	1.605	0.4373	Yes
10	PSMD7	1432820_at 1451056_at 1454368_at	758	1.577	0.4670	Yes
11	RFC4	1424321_at 1438161_s_at	762	1.572	0.4977	Yes
12	CTPS	1416563_at	998	1.305	0.5125	Yes
13	STX1A	1437390_x_at 1448366_at	1250	1.112	0.5229	Yes
14	NDRG1	1423413_at 1450976_at 1456174_x_at	1251	1.112	0.5447	Yes
15	ECT2	1419513_a_at	1467	0.978	0.5540	Yes
16	BIRC5	1424278_a_at	1508	0.963	0.5711	Yes
17	CKS2	1417457_at 1417458_s_at	1608	0.913	0.5845	Yes
18	BUB1	1424046_at 1438571_at	1704	0.876	0.5973	Yes
19	MAD2L1	1422460_at	1742	0.858	0.6125	Yes
20	SERF1A	1434291_a_at 1449509_at 1452502_at 1454907_at 1454908_x_at	1825	0.821	0.6248	Yes
21	PRC1	1423774_a_at 1423775_s_at	1991	0.750	0.6320	Yes
22	EZH2	1416544_at 1444263_at	2029	0.737	0.6448	Yes
23	ORC6L	1417037_at	2054	0.727	0.6579	Yes
24	ST7	1418967_a_at	2296	0.653	0.6597	Yes
25	RRM2	1416120_at 1434437_x_at 1448226_at	2521	0.591	0.6611	Yes
26	STK3	1418512_at 1418513_at 1446289_at 1446627_at 1449114_at	3815	0.374	0.6093	No
27	RAB6B	1434914_at 1437107_at 1455924_at 1460617_s_at	6576	0.213	0.4873	No
28	CCNB2	1450920_at	6922	0.199	0.4755	No
29	PIR	1429001_at	7193	0.190	0.4669	No
30	SACS	1423010_at 1434958_at 1457775_at	7330	0.185	0.4643	No
31	NMU	1419325_at	8861	0.139	0.3970	No
32	MGAT4A	1444347_at	8866	0.139	0.3996	No
33	CCNE2	1422535_at	9139	0.132	0.3897	No
34	COL4A2	1424051_at	9276	0.128	0.3860	No
35	PSMD2	1415831_at	9867	0.112	0.3612	No
36	FLT1	1419300_at 1440926_at 1451756_at 1454037_a_at	10018	0.108	0.3565	No
37	BNIP3	1422470_at	10097	0.106	0.3550	No
38	GBE1	1420654_a_at 1458767_at	11192	0.079	0.3065	No
39	FBXO5	1429499_at	11832	0.062	0.2786	No
40	GNAZ	1426517_at 1435268_at	12895	0.036	0.2307	No
41	TMEFF1	1426649_at 1441890_x_at	13386	0.022	0.2087	No
42	GGH	1437522_x_at 1456595_x_at 1460310_a_at 1460613_x_at	13501	0.019	0.2039	No
43	PFKP	1416069_at 1430634_a_at 1437759_at	13698	0.012	0.1952	No
44	CP	1417494_a_at 1417495_x_at 1417496_at 1417497_at 1441326_at 1448734_at 1448735_at	13716	0.012	0.1946	No
45	CDC25B	1421963_a_at	13756	0.011	0.1931	No
46	CENPF	1427161_at 1452334_at 1458447_at	14868	-0.028	0.1428	No
47	HRB	1426922_s_at 1426923_at 1434840_at 1452237_at 1452238_at	15691	-0.064	0.1065	No
48	IGFBP5	1422313_a_at 1452114_s_at	16280	-0.098	0.0816	No
49	PTDSS1	1416372_at 1441866_s_at 1449739_at	16419	-0.107	0.0773	No
50	AKAP2	1441270_at 1449168_a_at 1455870_at	17447	-0.203	0.0344	No
51	RAD21	1416161_at 1416162_at 1455938_x_at	17460	-0.205	0.0379	No
52	MMP9	1416298_at 1448291_at	17610	-0.228	0.0355	No
53	SLC2A3	1421924_at 1427770_a_at 1437052_s_at 1455898_x_at	17937	-0.270	0.0259	No
54	MCCC1	1417227_at	18662	-0.389	0.0004	No
55	PCTK1	1415956_a_at 1438314_at 1443296_at 1460169_a_at	19613	-0.623	-0.0308	No
56	NMB	1419405_at	19830	-0.699	-0.0269	No
57	EXT1	1417730_at 1439877_at 1440011_at 1440092_at 1456655_at 1458054_at 1458296_at	20488	-0.986	-0.0376	No
58	MTMR2	1425459_at 1425460_at 1446213_at	20986	-1.395	-0.0330	No
59	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21326	-1.880	-0.0116	No
60	VEGF	1420909_at 1451959_a_at	21406	-2.008	0.0242	No