Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | ST_GA13_PATHWAY |
| Enrichment Score (ES) | -0.6788258 |
| Normalized Enrichment Score (NES) | -1.6811384 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.16448787 |
| FWER p-Value | 0.96 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | AKT1 | 1416657_at 1425711_a_at 1440950_at 1442759_at | 525 | 1.916 | 0.0446 | No | ||
| 2 | NFKBIL1 | 1449951_at | 2066 | 0.723 | 0.0002 | No | ||
| 3 | NFKBIL2 | 1428661_at | 2134 | 0.703 | 0.0223 | No | ||
| 4 | ROCK1 | 1423444_at 1423445_at 1441162_at 1446518_at 1450994_at 1460729_at | 2376 | 0.630 | 0.0339 | No | ||
| 5 | CDC42 | 1415724_a_at 1435807_at 1449574_a_at 1460708_s_at | 3826 | 0.373 | -0.0189 | No | ||
| 6 | NFKBIE | 1431843_a_at 1458299_s_at | 6075 | 0.232 | -0.1133 | No | ||
| 7 | PLD1 | 1425739_at 1437112_at 1437113_s_at | 9968 | 0.109 | -0.2870 | No | ||
| 8 | NFKBIB | 1421266_s_at 1446718_at | 10653 | 0.092 | -0.3149 | No | ||
| 9 | ROCK2 | 1423592_at 1451041_at | 11226 | 0.078 | -0.3383 | No | ||
| 10 | PLD2 | 1417237_at 1457252_x_at | 11688 | 0.066 | -0.3570 | No | ||
| 11 | MAPK8 | 1420931_at 1420932_at 1437045_at 1440856_at 1457936_at | 13273 | 0.025 | -0.4284 | No | ||
| 12 | PIK3CB | 1445731_at 1453069_at | 15462 | -0.052 | -0.5264 | No | ||
| 13 | ARHGEF11 | 1443539_at 1446904_at 1457188_at | 17062 | -0.159 | -0.5936 | No | ||
| 14 | AKT3 | 1422078_at 1435260_at 1435879_at 1443222_at 1460307_at | 17177 | -0.171 | -0.5927 | No | ||
| 15 | MAP2K4 | 1426233_at 1442679_at 1451982_at | 17377 | -0.194 | -0.5949 | No | ||
| 16 | NFKB2 | 1425902_a_at 1429128_x_at | 17945 | -0.270 | -0.6111 | No | ||
| 17 | SRF | 1418255_s_at 1418256_at | 18480 | -0.353 | -0.6228 | No | ||
| 18 | GNA13 | 1422555_s_at 1422556_at 1430295_at 1433749_at 1446722_at 1450656_at 1453470_a_at 1460317_s_at | 19431 | -0.569 | -0.6458 | No | ||
| 19 | RDX | 1416179_a_at 1416180_a_at 1439907_at 1445548_at 1448236_at | 20156 | -0.832 | -0.6491 | Yes | ||
| 20 | IKBKG | 1421208_at 1421209_s_at 1435646_at 1435647_at 1450161_at 1454690_at | 20443 | -0.967 | -0.6275 | Yes | ||
| 21 | BCL2 | 1422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at | 20696 | -1.127 | -0.5987 | Yes | ||
| 22 | PLD3 | 1416013_at | 20727 | -1.150 | -0.5589 | Yes | ||
| 23 | PDK1 | 1423747_a_at 1423748_at 1434974_at 1435836_at | 20815 | -1.229 | -0.5189 | Yes | ||
| 24 | PHKA2 | 1430492_at 1434518_at 1437941_at 1442147_at 1443402_at | 21059 | -1.490 | -0.4766 | Yes | ||
| 25 | MAP3K1 | 1424850_at | 21128 | -1.590 | -0.4228 | Yes | ||
| 26 | NFKB1 | 1427705_a_at 1442949_at | 21207 | -1.718 | -0.3649 | Yes | ||
| 27 | TBXA2R | 1419222_at | 21437 | -2.070 | -0.3012 | Yes | ||
| 28 | NFKBIA | 1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at | 21477 | -2.135 | -0.2266 | Yes | ||
| 29 | PTK2 | 1423059_at 1430827_a_at 1439198_at 1440082_at 1441475_at 1443384_at 1445137_at | 21796 | -3.373 | -0.1204 | Yes | ||
| 30 | AKT2 | 1421324_a_at 1424480_s_at 1455703_at | 21832 | -3.540 | 0.0047 | Yes |
