Details for gene set PASSERINI

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	PASSERINI_TRANSCRIPTION
Enrichment Score (ES)	-0.58802384
Normalized Enrichment Score (NES)	-1.6780673
Nominal p-value	0.0020325202
FDR q-value	0.16175258
FWER p-Value	0.964

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TP53	1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at	82	3.710	0.0799	No
2	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	1192	1.150	0.0551	No
3	ENPP2	1415894_at 1443224_at 1448136_at	1674	0.891	0.0532	No
4	STAT3	1424272_at 1426587_a_at 1459961_a_at 1460700_at	2871	0.513	0.0100	No
5	SOX8	1435438_at	3745	0.382	-0.0213	No
6	MYOG	1419391_at	3768	0.380	-0.0137	No
7	KLF4	1417394_at 1417395_at	3829	0.373	-0.0080	No
8	SMAD3	1450471_at 1450472_s_at 1454960_at	4242	0.334	-0.0193	No
9	THRB	1422202_at 1443100_at	5096	0.278	-0.0521	No
10	SPDEF	1450220_a_at	5391	0.263	-0.0596	No
11	XBP1	1420011_s_at 1420012_at 1420886_a_at 1437223_s_at	6722	0.207	-0.1157	No
12	TWIST1	1418733_at	7102	0.193	-0.1287	No
13	TEAD3	1420593_a_at	7108	0.193	-0.1246	No
14	HAND2	1422221_at 1436041_at 1443854_at 1446812_at	7803	0.170	-0.1525	No
15	MYCN	1417155_at 1425922_a_at 1425923_at	8073	0.162	-0.1611	No
16	FEV	1425886_at	8148	0.160	-0.1609	No
17	MEF2C	1421027_a_at 1421028_a_at 1424852_at 1439946_at 1445420_at 1446484_at 1451506_at 1451507_at 1458551_at	8699	0.144	-0.1828	No
18	NFYA	1422082_a_at 1427808_at 1452560_a_at	8728	0.143	-0.1809	No
19	RRN3	1415725_at	9393	0.124	-0.2084	No
20	HOXB5	1418415_at	10256	0.101	-0.2456	No
21	DLX4	1420595_at 1427641_at 1443591_at	10296	0.100	-0.2451	No
22	ETV1	1422607_at 1445314_at 1450684_at	10549	0.095	-0.2545	No
23	EN1	1418618_at	10804	0.089	-0.2641	No
24	HR	1422110_at 1435950_at	11295	0.076	-0.2848	No
25	HOXC10	1439798_at	11601	0.067	-0.2972	No
26	PITX2	1424797_a_at 1450482_a_at	11807	0.063	-0.3051	No
27	TRIM29	1424162_at	12153	0.054	-0.3197	No
28	DMTF1	1422636_at 1440349_at 1456697_x_at	12159	0.054	-0.3187	No
29	HOXD10	1418606_at	13056	0.031	-0.3590	No
30	JUN	1417409_at 1448694_at	13314	0.024	-0.3702	No
31	GTF3C1	1434066_at 1438425_at 1456024_at 1459673_at	13492	0.019	-0.3778	No
32	AIP	1423128_at	14359	-0.009	-0.4172	No
33	GATA6	1425463_at 1425464_at 1443081_at	15056	-0.035	-0.4483	No
34	ARNT	1419996_s_at 1421721_a_at 1425064_at 1437042_at 1449696_at	15443	-0.052	-0.4647	No
35	RXRB	1416990_at	15512	-0.055	-0.4666	No
36	ATF4	1438992_x_at 1439258_at 1448135_at	16381	-0.105	-0.5039	No
37	BRD8	1427192_a_at 1427193_at 1429526_at 1451137_a_at 1452350_at 1456351_at	16698	-0.127	-0.5155	No
38	KLF5	1430255_at 1451021_a_at 1451739_at	16802	-0.137	-0.5171	No
39	MITF	1422025_at 1455214_at	17279	-0.183	-0.5348	No
40	CREBL2	1435085_at 1442738_at	17357	-0.192	-0.5340	No
41	NFKB2	1425902_a_at 1429128_x_at	17945	-0.270	-0.5547	No
42	SNAPC1	1429335_at	18025	-0.281	-0.5520	No
43	ERCC3	1448497_at	18166	-0.304	-0.5516	No
44	TBX6	1449868_at	18856	-0.431	-0.5733	No
45	TCF12	1421908_a_at 1427670_a_at 1438762_at 1439209_at 1439619_at 1443012_at 1444620_at 1445093_at 1445133_at 1457524_at 1458337_at	19178	-0.507	-0.5766	Yes
46	NFE2L1	1416331_a_at	19231	-0.518	-0.5673	Yes
47	FUBP1	1433482_a_at 1433640_at 1437543_at 1437544_at	19561	-0.611	-0.5686	Yes
48	E4F1	1450464_at	19583	-0.616	-0.5556	Yes
49	KLF9	1422264_s_at 1428288_at 1428289_at 1436763_a_at 1436952_at 1452723_at 1456341_a_at	19879	-0.715	-0.5530	Yes
50	CTCF	1418330_at 1449042_at	19910	-0.726	-0.5380	Yes
51	RBPSUH	1418114_at 1438848_at 1446436_at 1448957_at 1454896_at	20177	-0.841	-0.5312	Yes
52	FOS	1423100_at	20289	-0.888	-0.5163	Yes
53	RARA	1450180_a_at	20419	-0.955	-0.5007	Yes
54	MEIS1	1440431_at 1443260_at 1445773_at 1450992_a_at 1459423_at 1459512_at	20652	-1.096	-0.4866	Yes
55	TSC22D3	1420772_a_at 1425281_a_at 1425557_x_at 1444365_at	20674	-1.111	-0.4625	Yes
56	TAF4	1427460_at 1452438_s_at	20913	-1.303	-0.4440	Yes
57	PBX2	1418893_at 1418894_s_at 1449261_at	21116	-1.569	-0.4179	Yes
58	ISGF3G	1421322_a_at	21167	-1.651	-0.3829	Yes
59	NFKB1	1427705_a_at 1442949_at	21207	-1.718	-0.3460	Yes
60	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	21477	-2.135	-0.3102	Yes
61	NR2C2	1425014_at 1439696_at 1445613_at 1446955_at 1451569_at 1454167_at 1454851_at	21561	-2.320	-0.2617	Yes
62	ETS1	1422027_a_at 1422028_a_at 1426725_s_at 1452163_at	21603	-2.483	-0.2076	Yes
63	FOXO1A	1416981_at 1416982_at 1416983_s_at 1459170_at	21766	-3.101	-0.1451	Yes
64	STAT1	1420915_at 1440481_at 1450033_a_at 1450034_at	21782	-3.273	-0.0720	Yes
65	AFF1	1418135_at 1425640_at 1425641_at 1441594_at 1444937_at	21825	-3.506	0.0051	Yes