Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | JECHLINGER_EMT_DN |
| Enrichment Score (ES) | -0.69426453 |
| Normalized Enrichment Score (NES) | -1.8423178 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.06722355 |
| FWER p-Value | 0.185 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | AMD1 | 1448484_at | 652 | 1.704 | 0.0156 | No | ||
| 2 | TIAM1 | 1418057_at 1444373_at 1453887_a_at | 1401 | 1.016 | 0.0084 | No | ||
| 3 | ITPR1 | 1417279_at 1443492_at 1457189_at 1460203_at | 1772 | 0.844 | 0.0140 | No | ||
| 4 | ATP1A1 | 1423653_at 1435919_at 1435920_x_at 1451071_a_at 1458868_at | 2318 | 0.645 | 0.0063 | No | ||
| 5 | CTSH | 1418365_at 1443814_x_at | 2950 | 0.495 | -0.0094 | No | ||
| 6 | ATF3 | 1449363_at | 3195 | 0.453 | -0.0085 | No | ||
| 7 | CDH1 | 1443509_at 1448261_at | 4070 | 0.347 | -0.0391 | No | ||
| 8 | TGFB3 | 1417455_at | 4714 | 0.299 | -0.0606 | No | ||
| 9 | FBP2 | 1449088_at | 4966 | 0.284 | -0.0645 | No | ||
| 10 | CTGF | 1416953_at | 5131 | 0.276 | -0.0646 | No | ||
| 11 | ITGB5 | 1417533_a_at 1417534_at 1456133_x_at 1456195_x_at | 5452 | 0.261 | -0.0723 | No | ||
| 12 | HMMR | 1425815_a_at 1427541_x_at 1429871_at 1450156_a_at 1450157_a_at | 5546 | 0.257 | -0.0697 | No | ||
| 13 | VAMP8 | 1420624_a_at | 6629 | 0.211 | -0.1135 | No | ||
| 14 | FOSB | 1422134_at | 8915 | 0.137 | -0.2142 | No | ||
| 15 | TIMP3 | 1419088_at 1419089_at 1449334_at 1449335_at | 11561 | 0.069 | -0.3331 | No | ||
| 16 | NUMB | 1416891_at 1425368_a_at 1444337_at 1457175_at | 12539 | 0.045 | -0.3766 | No | ||
| 17 | GRB7 | 1448227_at | 12604 | 0.043 | -0.3783 | No | ||
| 18 | TGM2 | 1417500_a_at 1426004_a_at 1433428_x_at 1437277_x_at 1438942_x_at 1455900_x_at | 13123 | 0.029 | -0.4012 | No | ||
| 19 | KITLG | 1415854_at 1415855_at 1426152_a_at 1440621_at 1448117_at | 13685 | 0.013 | -0.4265 | No | ||
| 20 | SERPINB5 | 1421752_a_at 1424623_at 1438856_x_at 1441941_x_at | 13815 | 0.009 | -0.4322 | No | ||
| 21 | F3 | 1417408_at | 14962 | -0.032 | -0.4836 | No | ||
| 22 | TACSTD1 | 1416579_a_at 1447899_x_at | 15002 | -0.033 | -0.4845 | No | ||
| 23 | PKP1 | 1449586_at | 17176 | -0.171 | -0.5792 | No | ||
| 24 | STAT5A | 1421469_a_at 1450259_a_at | 19066 | -0.479 | -0.6527 | No | ||
| 25 | MYH9 | 1417472_at 1420170_at 1420171_s_at 1420172_at 1440708_at | 19629 | -0.629 | -0.6617 | No | ||
| 26 | SGK | 1416041_at | 20344 | -0.914 | -0.6700 | Yes | ||
| 27 | RARA | 1450180_a_at | 20419 | -0.955 | -0.6479 | Yes | ||
| 28 | IRF6 | 1418301_at | 20528 | -1.014 | -0.6259 | Yes | ||
| 29 | FLNA | 1426677_at | 20667 | -1.107 | -0.6027 | Yes | ||
| 30 | JUP | 1426873_s_at | 20712 | -1.139 | -0.5745 | Yes | ||
| 31 | DUSP1 | 1448830_at | 21133 | -1.596 | -0.5512 | Yes | ||
| 32 | ARHGEF1 | 1421164_a_at 1440403_at | 21440 | -2.074 | -0.5100 | Yes | ||
| 33 | KLF2 | 1448890_at | 21660 | -2.687 | -0.4485 | Yes | ||
| 34 | BCL6 | 1421818_at 1450381_a_at | 21730 | -2.913 | -0.3741 | Yes | ||
| 35 | NNT | 1416105_at 1432608_at 1456573_x_at | 21800 | -3.378 | -0.2874 | Yes | ||
| 36 | ACTN4 | 1423449_a_at 1444258_at | 21819 | -3.472 | -0.1959 | Yes | ||
| 37 | EGR1 | 1417065_at | 21834 | -3.545 | -0.1022 | Yes | ||
| 38 | EGR2 | 1427682_a_at 1427683_at | 21875 | -4.015 | 0.0028 | Yes |
