Details for gene set HSA00190_OXIDATIVE

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	HSA00190_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)	0.68138087
Normalized Enrichment Score (NES)	2.122693
Nominal p-value	0.0
FDR q-value	0.0
FWER p-Value	0.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COX7C	1448112_at 1459884_at 1459885_s_at	0	8.097	0.0966	Yes
2	COX8A	1416112_at 1436409_at 1448222_x_at	2	6.931	0.1792	Yes
3	COX5B	1416902_a_at 1435613_x_at 1436149_at 1448514_at 1454716_x_at 1456588_x_at	3	6.855	0.2610	Yes
4	COX17	1434435_s_at 1434871_at	13	5.555	0.3268	Yes
5	ATP5C1	1416058_s_at 1438809_at	15	5.347	0.3906	Yes
6	NDUFB8	1448198_a_at 1458404_at	46	4.285	0.4403	Yes
7	ATP5G1	1416020_a_at 1444874_at	224	2.845	0.4661	Yes
8	NDUFS8	1423907_a_at 1423908_at 1434212_at 1434213_x_at 1434579_x_at 1455283_x_at	419	2.164	0.4831	Yes
9	ATP6V0D1	1415671_at 1442216_at	442	2.101	0.5071	Yes
10	PPA1	1416939_at	602	1.772	0.5210	Yes
11	ATP5F1	1426742_at 1433562_s_at	759	1.576	0.5326	Yes
12	ATP5G2	1415980_at 1456128_at	878	1.426	0.5442	Yes
13	NDUFV1	1415966_a_at 1415967_at 1456015_x_at	1579	0.931	0.5233	Yes
14	CYC1	1416604_at	1610	0.912	0.5328	Yes
15	NDUFC1	1416285_at 1448284_a_at	1678	0.889	0.5403	Yes
16	SDHD	1428235_at 1437489_x_at	1820	0.822	0.5437	Yes
17	ATP5L	1448203_at	1892	0.789	0.5498	Yes
18	UQCRFS1	1450968_at	1931	0.774	0.5573	Yes
19	NDUFS1	1425143_a_at 1453354_at	1983	0.753	0.5640	Yes
20	NDUFV2	1428179_at 1438159_x_at 1452692_a_at	2007	0.743	0.5718	Yes
21	UQCR	1448292_at	2018	0.740	0.5801	Yes
22	COX5A	1415933_a_at 1439267_x_at 1448153_at	2132	0.703	0.5834	Yes
23	ATP5J	1416143_at	2147	0.699	0.5911	Yes
24	NDUFB2	1416834_x_at 1442658_at 1448483_a_at 1453806_at	2158	0.695	0.5989	Yes
25	SDHB	1418005_at	2180	0.690	0.6062	Yes
26	NDUFS7	1424313_a_at 1451312_at	2206	0.681	0.6131	Yes
27	NDUFB10	1428322_a_at	2233	0.673	0.6200	Yes
28	NDUFA12	1418814_s_at 1433513_x_at	2349	0.636	0.6223	Yes
29	COX6A2	1417607_at 1457633_x_at	2353	0.636	0.6297	Yes
30	NDUFA8	1423692_at	2386	0.627	0.6357	Yes
31	TCIRG1	1420635_a_at	2431	0.614	0.6410	Yes
32	ATP6V1G2	1417799_at	2455	0.608	0.6473	Yes
33	NDUFA7	1422976_x_at 1428360_x_at 1436567_a_at 1450818_a_at 1455749_x_at	2532	0.589	0.6508	Yes
34	ATP5E	1416567_s_at	2817	0.525	0.6440	Yes
35	NDUFB6	1434056_a_at 1434057_at	2820	0.523	0.6502	Yes
36	NDUFB5	1417102_a_at 1448589_at	2896	0.508	0.6528	Yes
37	UQCRC1	1428782_a_at	2915	0.503	0.6580	Yes
38	NDUFA6	1448427_at	2965	0.493	0.6616	Yes
39	NDUFA5	1417285_a_at 1417286_at	2983	0.491	0.6667	Yes
40	ATP5O	1416278_a_at	3021	0.484	0.6708	Yes
41	NDUFS6	1433603_at	3153	0.461	0.6703	Yes
42	COX6C	1415970_at 1434491_a_at	3175	0.457	0.6748	Yes
43	ATP6V1G1	1423255_at	3229	0.447	0.6777	Yes
44	NDUFS3	1423737_at	3333	0.434	0.6781	Yes
45	NDUFA9	1416663_at	3425	0.420	0.6790	Yes
46	COX4I2	1421373_at	3542	0.405	0.6785	Yes
47	UQCRC2	1428631_a_at 1435757_a_at	3584	0.400	0.6814	Yes
48	PPA2	1424488_a_at	3710	0.386	0.6803	No
49	ATP5A1	1420037_at 1423111_at 1449710_s_at	4020	0.352	0.6703	No
50	ATP5B	1416829_at	4523	0.310	0.6510	No
51	COX6B1	1416565_at 1436757_a_at	4913	0.287	0.6366	No
52	ATP5G3	1454661_at	4990	0.283	0.6365	No
53	ATP5J2	1416269_at 1435395_s_at	5346	0.266	0.6234	No
54	ATP5I	1422525_at 1434053_x_at 1450640_x_at	5377	0.264	0.6252	No
55	ATP4B	1448911_at	5545	0.257	0.6206	No
56	SDHC	1435986_x_at 1448630_a_at	5740	0.247	0.6147	No
57	NDUFS2	1451096_at	6654	0.210	0.5753	No
58	ATP4A	1421286_a_at	6697	0.208	0.5759	No
59	ATP12A	1449475_at	7753	0.171	0.5296	No
60	NDUFA1	1422241_a_at	8118	0.161	0.5149	No
61	UQCRQ	1427880_at 1430326_s_at 1437134_at 1452613_at	8694	0.144	0.4902	No
62	ATP5D	1423716_s_at 1456580_s_at	8787	0.141	0.4877	No
63	COX8C	1443789_x_at 1455167_at	8804	0.141	0.4886	No
64	NDUFB3	1416547_at	8967	0.136	0.4828	No
65	ATP5H	1423676_at 1435112_a_at	9029	0.135	0.4817	No
66	ATP6V1E2	1450552_at	9053	0.134	0.4822	No
67	NDUFS5	1416494_at 1416495_s_at	9379	0.125	0.4688	No
68	NDUFA11	1429708_at 1444154_at	9455	0.123	0.4668	No
69	COX6B2	1435275_at	9658	0.117	0.4590	No
70	NDUFB7	1416417_a_at 1448331_at	9696	0.117	0.4587	No
71	COX7A2	1416970_a_at 1416971_at	10291	0.101	0.4327	No
72	NDUFC2	1431670_at	10578	0.094	0.4207	No
73	COX6A1	1417417_a_at	10769	0.090	0.4131	No
74	NDUFA10	1418068_at 1448934_at	11014	0.083	0.4029	No
75	ATP6V0A4	1422030_at 1443732_at	11028	0.083	0.4033	No
76	NDUFB4	1428075_at 1428076_s_at 1432427_at	11038	0.082	0.4038	No
77	ATP6V1C2	1430306_a_at	11044	0.082	0.4046	No
78	COX4I1	1448322_a_at	11216	0.078	0.3977	No
79	ATP6V1C1	1419544_at 1419545_a_at 1419546_at	11263	0.077	0.3965	No
80	NDUFA4	1424085_at	11719	0.065	0.3764	No
81	SDHA	1426688_at 1426689_s_at 1445317_at	12388	0.049	0.3464	No
82	ATP6V0D2	1434798_at 1444176_at	13206	0.027	0.3093	No
83	UQCRH	1452133_at 1453229_s_at	13504	0.019	0.2959	No
84	ATP6V1B1	1419373_at	13619	0.015	0.2909	No
85	ATP6V1H	1415826_at 1447659_x_at 1457639_at	14013	0.003	0.2729	No
86	NDUFB9	1436803_a_at 1452184_at 1455934_at	15120	-0.038	0.2227	No
87	COX7A1	1418709_at	15219	-0.042	0.2187	No
88	ATP6V1F	1423993_at	15434	-0.051	0.2095	No
89	NDUFA2	1417368_s_at	15514	-0.055	0.2065	No
90	NDUFS4	1418117_at 1438166_x_at 1444464_at 1448959_at 1459760_at	15987	-0.080	0.1859	No
91	NDUFB11	1416056_a_at 1416057_at 1455911_x_at	16302	-0.099	0.1727	No
92	COX10	1429329_at 1446223_at 1459977_x_at	16690	-0.127	0.1565	No
93	ATP6V1E1	1420038_at 1449711_at 1449712_s_at 1457049_at	16746	-0.132	0.1555	No
94	ATP6V1A	1422508_at 1445916_at 1450634_at	16832	-0.139	0.1533	No
95	ATP6V0A1	1417632_at 1425227_a_at 1459924_at 1460650_at	17109	-0.164	0.1426	No
96	ATP6V0B	1416769_s_at 1425448_x_at 1437013_x_at	17501	-0.212	0.1272	No
97	NDUFA13	1430713_s_at	18187	-0.307	0.0995	No
98	NDUFAB1	1428159_s_at 1428160_at 1435934_at 1447919_x_at 1453565_at 1458678_at	18725	-0.400	0.0797	No
99	COX15	1426693_x_at 1437982_x_at 1452146_a_at 1460376_a_at	18815	-0.421	0.0806	No
100	ATP6V0C	1416392_a_at 1435732_x_at 1438925_x_at	18872	-0.434	0.0832	No
101	ATP6AP1	1449622_s_at	18910	-0.442	0.0868	No
102	ATP6V0A2	1424513_at 1434791_at 1449870_a_at	19172	-0.505	0.0809	No
103	ATP6V1B2	1415814_at 1419883_s_at 1446465_at 1449649_at	19579	-0.616	0.0696	No
104	ATP6V1D	1416951_a_at 1416952_at 1438993_a_at	19976	-0.751	0.0605	No
105	NDUFA3	1428464_at 1430149_at 1452790_x_at	20225	-0.856	0.0593	No
106	UQCRB	1416337_at 1455997_a_at	21131	-1.594	0.0369	No