Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | HBX_HCC_DN |
| Enrichment Score (ES) | -0.71238136 |
| Normalized Enrichment Score (NES) | -1.6911628 |
| Nominal p-value | 0.0061099795 |
| FDR q-value | 0.18341874 |
| FWER p-Value | 0.947 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | TGFB2 | 1423250_a_at 1438303_at 1446141_at 1450922_a_at 1450923_at | 453 | 2.078 | 0.0557 | No | ||
| 2 | PTPN14 | 1421499_a_at 1436442_at | 666 | 1.687 | 0.1079 | No | ||
| 3 | RYBP | 1421111_at | 3683 | 0.389 | -0.0154 | No | ||
| 4 | PRKCI | 1417410_s_at 1448695_at | 4300 | 0.330 | -0.0314 | No | ||
| 5 | PPP5C | 1424115_at 1424116_x_at 1451242_a_at | 5123 | 0.276 | -0.0587 | No | ||
| 6 | EIF2AK2 | 1422005_at 1422006_at 1440866_at | 6685 | 0.208 | -0.1223 | No | ||
| 7 | ANPEP | 1421424_a_at | 8304 | 0.155 | -0.1904 | No | ||
| 8 | MADCAM1 | 1425253_a_at | 10736 | 0.091 | -0.2980 | No | ||
| 9 | HSPA1L | 1419625_at 1440450_at | 11915 | 0.060 | -0.3496 | No | ||
| 10 | MAP2K3 | 1425456_a_at 1451714_a_at | 12727 | 0.040 | -0.3851 | No | ||
| 11 | APRIN | 1435242_at 1436161_at 1441553_at | 13489 | 0.019 | -0.4192 | No | ||
| 12 | KLF6 | 1418280_at 1427742_a_at 1433508_at 1447448_s_at 1459718_x_at | 16541 | -0.115 | -0.5541 | No | ||
| 13 | RAB5C | 1424684_at | 18101 | -0.294 | -0.6145 | No | ||
| 14 | CSNK1G2 | 1423370_a_at | 18574 | -0.372 | -0.6224 | No | ||
| 15 | BCL2L1 | 1420887_a_at 1420888_at 1426050_at 1426191_a_at | 19896 | -0.719 | -0.6562 | Yes | ||
| 16 | MAP3K1 | 1424850_at | 21128 | -1.590 | -0.6540 | Yes | ||
| 17 | NCOA3 | 1422737_at 1457214_at 1458039_at | 21478 | -2.136 | -0.5914 | Yes | ||
| 18 | PRKCD | 1422847_a_at 1442256_at | 21582 | -2.392 | -0.5083 | Yes | ||
| 19 | CDC42BPA | 1435847_at 1436380_at 1438449_at 1442260_at 1446945_at | 21666 | -2.698 | -0.4130 | Yes | ||
| 20 | STK25 | 1416770_at 1419777_at | 21667 | -2.698 | -0.3139 | Yes | ||
| 21 | TGFB1 | 1420653_at 1445360_at | 21829 | -3.528 | -0.1916 | Yes | ||
| 22 | YWHAE | 1426384_a_at 1426385_x_at 1435702_s_at 1438839_a_at 1440841_at 1457173_at | 21918 | -5.349 | 0.0008 | Yes |
