Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_minus |
| GeneSet | REACTOME_SIGNALING_BY_PDGF |
| Enrichment Score (ES) | 0.7645602 |
| Normalized Enrichment Score (NES) | 1.7639214 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.025073653 |
| FWER p-Value | 0.352 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | PLCG1 | 1435149_at 1450360_at | 37 | 4.528 | 0.2605 | Yes | ||
| 2 | KRAS | 1426228_at 1426229_s_at 1434000_at 1451979_at | 84 | 3.699 | 0.4725 | Yes | ||
| 3 | RASA1 | 1426476_at 1426477_at 1426478_at 1438998_at | 243 | 2.703 | 0.6218 | Yes | ||
| 4 | PDGFRB | 1417148_at 1436970_a_at | 300 | 2.509 | 0.7646 | Yes | ||
| 5 | YWHAB | 1420878_a_at 1420879_a_at 1420880_a_at 1436783_x_at 1438708_x_at 1455815_a_at | 1612 | 0.912 | 0.7575 | No | ||
| 6 | NCK2 | 1416796_at 1416797_at 1458432_at | 3048 | 0.479 | 0.7198 | No | ||
| 7 | MAPK1 | 1419568_at 1426585_s_at 1442876_at 1453104_at | 6119 | 0.230 | 0.5930 | No | ||
| 8 | PDGFRA | 1421916_at 1421917_at 1438946_at | 7936 | 0.166 | 0.5198 | No | ||
| 9 | PLAT | 1415806_at 1458553_at | 10878 | 0.087 | 0.3906 | No | ||
| 10 | MAP2K2 | 1415974_at 1443436_at 1460636_at | 12229 | 0.053 | 0.3320 | No | ||
| 11 | GRB7 | 1448227_at | 12604 | 0.043 | 0.3175 | No | ||
| 12 | PTPN11 | 1421196_at 1427699_a_at 1451225_at | 12683 | 0.041 | 0.3163 | No | ||
| 13 | BCAR1 | 1439388_s_at 1450622_at | 14577 | -0.017 | 0.2309 | No | ||
| 14 | PIK3R1 | 1425514_at 1425515_at 1438682_at 1444591_at 1451737_at | 15150 | -0.039 | 0.2071 | No | ||
| 15 | PDGFB | 1450413_at 1450414_at | 15457 | -0.052 | 0.1961 | No | ||
| 16 | PIK3CB | 1445731_at 1453069_at | 15462 | -0.052 | 0.1990 | No | ||
| 17 | MAP2K1 | 1416351_at | 16691 | -0.127 | 0.1503 | No | ||
| 18 | RAF1 | 1416078_s_at 1425419_a_at | 16963 | -0.150 | 0.1467 | No | ||
| 19 | MAPK3 | 1427060_at | 18642 | -0.385 | 0.0924 | No | ||
| 20 | SOS1 | 1421884_at 1421885_at 1421886_at | 18996 | -0.463 | 0.1031 | No | ||
| 21 | FURIN | 1418518_at | 19299 | -0.535 | 0.1203 | No |
