Details for gene set REACTOME_DNA

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	REACTOME_DNA_REPLICATION
Enrichment Score (ES)	0.63916487
Normalized Enrichment Score (NES)	1.8518866
Nominal p-value	0.0
FDR q-value	0.0063369554
FWER p-Value	0.059

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PSMA1	1415695_at 1436769_at 1436770_x_at 1458292_at	10	5.918	0.0735	Yes
2	POLA2	1425794_at 1448369_at 1456713_at	120	3.359	0.1105	Yes
3	PSMD9	1423386_at 1423387_at 1444321_at 1447670_at	180	3.043	0.1458	Yes
4	PRIM1	1418369_at 1444544_at 1449061_a_at	185	3.013	0.1833	Yes
5	PSMC6	1417771_a_at	188	2.991	0.2206	Yes
6	POLE	1441854_at 1448650_a_at	208	2.910	0.2561	Yes
7	MCM6	1416251_at 1438852_x_at 1447756_x_at	293	2.536	0.2840	Yes
8	FEN1	1421731_a_at 1436454_x_at	341	2.391	0.3117	Yes
9	MCM10	1433407_at 1433408_a_at 1454244_at	517	1.943	0.3280	Yes
10	PSMD7	1432820_at 1451056_at 1454368_at	758	1.577	0.3367	Yes
11	RFC4	1424321_at 1438161_s_at	762	1.572	0.3562	Yes
12	MCM5	1415945_at 1436808_x_at	806	1.510	0.3731	Yes
13	RFC3	1423700_at 1432538_a_at	843	1.469	0.3898	Yes
14	ORC4L	1423336_at 1423337_at 1431172_at 1453804_a_at	888	1.419	0.4056	Yes
15	MCM4	1416214_at 1436708_x_at	896	1.412	0.4229	Yes
16	PSMA6	1416506_at 1435316_at 1435317_x_at 1437144_x_at	973	1.326	0.4360	Yes
17	POLE2	1427094_at 1431440_at	991	1.311	0.4516	Yes
18	PSMD12	1448492_a_at	993	1.310	0.4679	Yes
19	PSMA4	1460339_at	1094	1.216	0.4786	Yes
20	PSME3	1418078_at 1418079_at 1438509_at	1254	1.110	0.4852	Yes
21	GMNN	1417506_at	1266	1.104	0.4985	Yes
22	POLD2	1448277_at	1306	1.081	0.5102	Yes
23	LIG1	1416641_at	1607	0.917	0.5079	Yes
24	PSMA2	1448206_at	1800	0.830	0.5095	Yes
25	PSMB3	1417052_at	1802	0.829	0.5198	Yes
26	PSMC1	1416005_at	1826	0.820	0.5290	Yes
27	PSMB10	1448632_at	1832	0.817	0.5390	Yes
28	RPA2	1416433_at 1454011_a_at	1887	0.793	0.5465	Yes
29	RFC5	1452917_at	1900	0.786	0.5557	Yes
30	PSMC4	1416290_a_at 1416291_at	1975	0.757	0.5618	Yes
31	PSMA7	1423567_a_at 1423568_at	1978	0.756	0.5712	Yes
32	PSMA5	1424681_a_at 1434356_a_at	2010	0.742	0.5790	Yes
33	POLD1	1448187_at 1456055_x_at	2046	0.729	0.5865	Yes
34	PSMB9	1450696_at	2314	0.646	0.5824	Yes
35	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	2337	0.640	0.5894	Yes
36	PSMB6	1448822_at	2439	0.614	0.5924	Yes
37	PSMC3	1416282_at	2493	0.597	0.5975	Yes
38	PSMD6	1423696_a_at 1423697_at	2647	0.563	0.5975	Yes
39	PSMB1	1420052_x_at 1420053_at 1448166_a_at	2670	0.558	0.6035	Yes
40	PSMC5	1415740_at	2684	0.553	0.6098	Yes
41	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	2708	0.547	0.6156	Yes
42	RPA1	1423293_at 1437309_a_at 1441240_at	2752	0.535	0.6203	Yes
43	PSMD5	1423234_at	2894	0.509	0.6202	Yes
44	PSMD8	1423296_at	2913	0.504	0.6257	Yes
45	PSMA3	1448442_a_at	2943	0.497	0.6306	Yes
46	PCNA	1417947_at	2980	0.492	0.6351	Yes
47	PSMB5	1415676_a_at	3059	0.476	0.6375	Yes
48	ORC1L	1422663_at 1443172_at	3218	0.449	0.6358	Yes
49	PSMD3	1448479_at	3314	0.436	0.6369	Yes
50	MCM2	1434079_s_at 1448777_at	3383	0.426	0.6392	Yes
51	PSMB4	1438984_x_at 1451205_at	4692	0.300	0.5831	No
52	E2F2	1455790_at 1458574_at	6120	0.230	0.5207	No
53	ORC5L	1415830_at 1441601_at	7409	0.182	0.4641	No
54	POLA1	1419397_at 1456285_at 1459319_at 1459963_at	7660	0.174	0.4548	No
55	CDC7	1426002_a_at 1426021_a_at	8519	0.149	0.4174	No
56	PSME1	1417056_at	9239	0.129	0.3862	No
57	PSMD2	1415831_at	9867	0.112	0.3589	No
58	PSMD11	1429370_a_at 1432726_at 1456059_at 1456104_at	16069	-0.085	0.0764	No
59	RFC1	1418342_at 1449050_at 1451920_a_at	16578	-0.118	0.0546	No
60	PSMD10	1436559_a_at	17175	-0.171	0.0295	No
61	ORC2L	1418225_at 1418226_at 1418227_at	17417	-0.200	0.0210	No
62	RB1	1417850_at 1441494_at 1444400_at 1444454_at 1457447_at	17944	-0.270	0.0003	No
63	PSMB2	1444377_at 1448262_at 1459641_at	18142	-0.301	-0.0050	No
64	RFC2	1417503_at 1457638_x_at 1457669_x_at	18242	-0.317	-0.0055	No
65	CDK2	1416873_a_at 1447617_at	18435	-0.345	-0.0100	No
66	RPA3	1448938_at	18476	-0.353	-0.0074	No
67	CDC45L	1416575_at 1457838_at	20026	-0.772	-0.0686	No
68	MCM3	1420029_at 1426653_at	21359	-1.933	-0.1054	No
69	PSMD4	1418874_a_at 1425859_a_at 1451725_a_at	21536	-2.261	-0.0852	No
70	PSMD14	1421751_a_at 1446521_at 1457765_at 1459734_at	21877	-4.048	-0.0501	No
71	PSMC2	1426611_at 1435859_x_at 1443307_at	21888	-4.222	0.0022	No