Details for gene set REACTOME_CELL_CYCLE_

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	REACTOME_CELL_CYCLE__MITOTIC
Enrichment Score (ES)	0.6146473
Normalized Enrichment Score (NES)	1.9960978
Nominal p-value	0.0
FDR q-value	2.625E-4
FWER p-Value	0.0010

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PSMA1	1415695_at 1436769_at 1436770_x_at 1458292_at	10	5.918	0.0411	Yes
2	POLA2	1425794_at 1448369_at 1456713_at	120	3.359	0.0596	Yes
3	XPO1	1418442_at 1418443_at 1448070_at	128	3.276	0.0823	Yes
4	CCNB1	1419943_s_at 1419944_at	168	3.093	0.1022	Yes
5	PSMD9	1423386_at 1423387_at 1444321_at 1447670_at	180	3.043	0.1231	Yes
6	RANGAP1	1423749_s_at 1444581_at 1451092_a_at	184	3.018	0.1441	Yes
7	PRIM1	1418369_at 1444544_at 1449061_a_at	185	3.013	0.1653	Yes
8	PSMC6	1417771_a_at	188	2.991	0.1862	Yes
9	POLE	1441854_at 1448650_a_at	208	2.910	0.2057	Yes
10	ZWINT	1423724_at 1427539_a_at 1427540_at 1429786_a_at 1429787_x_at 1444717_at 1455382_at	236	2.731	0.2236	Yes
11	ACTR1A	1415873_a_at 1458696_at 1459855_x_at	289	2.546	0.2391	Yes
12	SDCCAG8	1431203_at 1444831_at 1453946_a_at 1456538_at	323	2.444	0.2548	Yes
13	FEN1	1421731_a_at 1436454_x_at	341	2.391	0.2708	Yes
14	CKS1B	1416698_a_at 1439514_at 1448441_at 1456268_at	383	2.275	0.2848	Yes
15	PTTG1	1419620_at 1424105_a_at 1438390_s_at	401	2.214	0.2996	Yes
16	CDKN1A	1421679_a_at 1424638_at	454	2.078	0.3118	Yes
17	MCM10	1433407_at 1433408_a_at 1454244_at	517	1.943	0.3226	Yes
18	BUB1B	1416961_at 1447362_at 1447363_s_at	531	1.905	0.3354	Yes
19	NEK2	1417299_at 1437579_at 1437580_s_at 1443999_at	535	1.890	0.3485	Yes
20	CDC20	1416664_at 1439377_x_at 1439394_x_at	584	1.808	0.3590	Yes
21	CENPA	1441864_x_at 1444416_at 1450842_a_at	599	1.779	0.3708	Yes
22	SMC1A	1417830_at 1417831_at 1417832_at	718	1.620	0.3768	Yes
23	PSMD7	1432820_at 1451056_at 1454368_at	758	1.577	0.3860	Yes
24	RFC4	1424321_at 1438161_s_at	762	1.572	0.3969	Yes
25	MCM5	1415945_at 1436808_x_at	806	1.510	0.4056	Yes
26	WEE1	1416773_at 1416774_at	812	1.497	0.4158	Yes
27	RFC3	1423700_at 1432538_a_at	843	1.469	0.4248	Yes
28	ORC4L	1423336_at 1423337_at 1431172_at 1453804_a_at	888	1.419	0.4327	Yes
29	MAPRE1	1422764_at 1422765_at 1428819_at 1428820_at 1450740_a_at	891	1.416	0.4426	Yes
30	MCM4	1416214_at 1436708_x_at	896	1.412	0.4523	Yes
31	PSMA6	1416506_at 1435316_at 1435317_x_at 1437144_x_at	973	1.326	0.4581	Yes
32	POLE2	1427094_at 1431440_at	991	1.311	0.4665	Yes
33	PSMD12	1448492_a_at	993	1.310	0.4757	Yes
34	PSMA4	1460339_at	1094	1.216	0.4796	Yes
35	NUP160	1418530_at 1444892_at	1131	1.194	0.4863	Yes
36	NUP43	1432187_at 1432188_s_at	1168	1.170	0.4929	Yes
37	PSME3	1418078_at 1418079_at 1438509_at	1254	1.110	0.4968	Yes
38	GMNN	1417506_at	1266	1.104	0.5040	Yes
39	POLD2	1448277_at	1306	1.081	0.5098	Yes
40	CDK4	1422441_x_at	1506	0.963	0.5074	Yes
41	BIRC5	1424278_a_at	1508	0.963	0.5142	Yes
42	KIF20A	1449207_a_at	1560	0.939	0.5184	Yes
43	LIG1	1416641_at	1607	0.917	0.5227	Yes
44	BUB1	1424046_at 1438571_at	1704	0.876	0.5245	Yes
45	MAD2L1	1422460_at	1742	0.858	0.5288	Yes
46	PSMA2	1448206_at	1800	0.830	0.5320	Yes
47	PSMC1	1416005_at	1826	0.820	0.5366	Yes
48	PSMB10	1448632_at	1832	0.817	0.5421	Yes
49	RPA2	1416433_at 1454011_a_at	1887	0.793	0.5452	Yes
50	RFC5	1452917_at	1900	0.786	0.5502	Yes
51	PSMC4	1416290_a_at 1416291_at	1975	0.757	0.5521	Yes
52	PSMA7	1423567_a_at 1423568_at	1978	0.756	0.5573	Yes
53	PSMA5	1424681_a_at 1434356_a_at	2010	0.742	0.5611	Yes
54	POLD1	1448187_at 1456055_x_at	2046	0.729	0.5646	Yes
55	PMF1	1416707_a_at 1438173_x_at	2167	0.693	0.5639	Yes
56	CDC25C	1422252_a_at	2169	0.693	0.5688	Yes
57	YWHAG	1420816_at 1420817_at 1450012_x_at 1459693_x_at	2251	0.668	0.5697	Yes
58	PSMB9	1450696_at	2314	0.646	0.5714	Yes
59	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	2337	0.640	0.5749	Yes
60	CENPE	1435005_at 1439040_at	2414	0.620	0.5758	Yes
61	TUBG1	1417144_at	2486	0.599	0.5767	Yes
62	PSMC3	1416282_at	2493	0.597	0.5806	Yes
63	KNTC1	1435575_at	2533	0.588	0.5830	Yes
64	PSMD6	1423696_a_at 1423697_at	2647	0.563	0.5817	Yes
65	PSMB1	1420052_x_at 1420053_at 1448166_a_at	2670	0.558	0.5846	Yes
66	PSMC5	1415740_at	2684	0.553	0.5879	Yes
67	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	2708	0.547	0.5907	Yes
68	CEP135	1444201_at	2750	0.536	0.5926	Yes
69	RPA1	1423293_at 1437309_a_at 1441240_at	2752	0.535	0.5963	Yes
70	NUP37	1423969_at	2807	0.526	0.5975	Yes
71	PSMD5	1423234_at	2894	0.509	0.5971	Yes
72	PSMD8	1423296_at	2913	0.504	0.5998	Yes
73	PSMA3	1448442_a_at	2943	0.497	0.6020	Yes
74	CCNE1	1416492_at 1441910_x_at	2955	0.495	0.6050	Yes
75	PLK4	1419838_s_at 1426580_at 1452115_a_at	2973	0.492	0.6076	Yes
76	PCNA	1417947_at	2980	0.492	0.6108	Yes
77	PSMB5	1415676_a_at	3059	0.476	0.6106	Yes
78	CEP57	1428968_at 1452983_at	3129	0.464	0.6107	Yes
79	FGFR1OP	1428919_at	3180	0.456	0.6116	Yes
80	ORC1L	1422663_at 1443172_at	3218	0.449	0.6130	Yes
81	PSMD3	1448479_at	3314	0.436	0.6117	Yes
82	CENPC1	1420441_at	3355	0.430	0.6129	Yes
83	MCM2	1434079_s_at 1448777_at	3383	0.426	0.6146	Yes
84	E2F1	1417878_at 1431875_a_at 1447840_x_at	3596	0.399	0.6077	No
85	DCTN3	1416247_at	3721	0.385	0.6047	No
86	TYMS	1427810_at 1427811_at 1438690_at 1442192_at	3867	0.368	0.6007	No
87	CCNH	1418585_at	4269	0.332	0.5846	No
88	UBE2C	1452954_at	4374	0.323	0.5821	No
89	CDC27	1426076_at 1433848_at 1433849_at 1454739_at	4618	0.304	0.5730	No
90	PSMB4	1438984_x_at 1451205_at	4692	0.300	0.5718	No
91	PRKAR2B	1430640_a_at 1438664_at 1456475_s_at	5402	0.263	0.5411	No
92	OFD1	1427172_at	5813	0.244	0.5240	No
93	NUP107	1426751_s_at	6103	0.230	0.5123	No
94	SGOL2	1437370_at	6349	0.222	0.5027	No
95	CLASP1	1427353_at 1452265_at 1459233_at 1460102_at	6368	0.221	0.5034	No
96	CDK7	1424257_at 1439511_at 1451741_a_at 1458987_at	6516	0.215	0.4981	No
97	CCNB2	1450920_at	6922	0.199	0.4809	No
98	ORC5L	1415830_at 1441601_at	7409	0.182	0.4599	No
99	KIF2A	1432072_at 1450052_at 1450053_at 1452499_a_at 1454107_a_at	7537	0.177	0.4553	No
100	DYNLL1	1448682_at	7543	0.177	0.4563	No
101	POLA1	1419397_at 1456285_at 1459319_at 1459963_at	7660	0.174	0.4522	No
102	CDC16	1425554_a_at	9545	0.121	0.3666	No
103	MNAT1	1432177_a_at	9602	0.119	0.3649	No
104	PSMD2	1415831_at	9867	0.112	0.3535	No
105	CEP110	1421004_at 1421005_at 1435779_at	10161	0.104	0.3408	No
106	CEP152	1427496_at	10584	0.094	0.3221	No
107	CEP78	1436352_at	10847	0.087	0.3107	No
108	CKAP5	1430647_at 1437349_at 1442271_at	11104	0.081	0.2995	No
109	DCTN2	1424461_at	11312	0.075	0.2905	No
110	SSNA1	1448643_at	11725	0.065	0.2721	No
111	TUBB4	1423221_at	12203	0.053	0.2506	No
112	CETN2	1418579_at 1438647_x_at	12689	0.041	0.2286	No
113	CDC25B	1421963_a_at	13756	0.011	0.1797	No
114	CCNA1	1449177_at	14444	-0.012	0.1483	No
115	CUL1	1448174_at 1459516_at	15156	-0.039	0.1159	No
116	BUB3	1416815_s_at 1448058_s_at 1448473_at 1459104_at 1459918_at	15208	-0.041	0.1139	No
117	PSMD11	1429370_a_at 1432726_at 1456059_at 1456104_at	16069	-0.085	0.0750	No
118	RFC1	1418342_at 1449050_at 1451920_a_at	16578	-0.118	0.0525	No
119	PRKACA	1447720_x_at 1450519_a_at	16584	-0.119	0.0531	No
120	PLK1	1443408_at 1448191_at 1459616_at	16609	-0.121	0.0529	No
121	ORC2L	1418225_at 1418226_at 1418227_at	17417	-0.200	0.0172	No
122	ZW10	1424891_a_at 1431747_at 1445206_at	17420	-0.200	0.0185	No
123	STAG2	1421849_at 1450396_at	17433	-0.202	0.0194	No
124	RAD21	1416161_at 1416162_at 1455938_x_at	17460	-0.205	0.0196	No
125	PAFAH1B1	1417086_at 1427703_at 1439656_at 1441404_at 1444125_at 1448578_at 1456947_at 1460199_a_at	17624	-0.229	0.0138	No
126	CDC25A	1417131_at 1417132_at 1445995_at	17656	-0.233	0.0140	No
127	RANBP2	1422621_at 1440104_at 1445883_at 1450690_at	17929	-0.269	0.0034	No
128	RB1	1417850_at 1441494_at 1444400_at 1444454_at 1457447_at	17944	-0.270	0.0046	No
129	CLASP2	1424836_a_at 1427328_a_at 1429976_at 1440802_at 1441726_at 1443320_at 1456911_at	18062	-0.287	0.0013	No
130	NUMA1	1423974_at 1423975_s_at 1441090_at 1444576_at 1444577_x_at	18114	-0.296	0.0010	No
131	PSMB2	1444377_at 1448262_at 1459641_at	18142	-0.301	0.0019	No
132	RFC2	1417503_at 1457638_x_at 1457669_x_at	18242	-0.317	-0.0004	No
133	SFI1	1428778_at	18252	-0.319	0.0014	No
134	CDK2	1416873_a_at 1447617_at	18435	-0.345	-0.0045	No
135	CCNA2	1417910_at 1417911_at	18439	-0.346	-0.0023	No
136	RPA3	1448938_at	18476	-0.353	-0.0014	No
137	TK2	1426100_a_at	18633	-0.384	-0.0059	No
138	TAOK1	1424657_at 1424658_at 1426357_at 1426358_at 1444385_at 1455432_at 1456975_at 1459770_at	18843	-0.427	-0.0125	No
139	DYNC1I2	1415841_at	18876	-0.435	-0.0109	No
140	KIF23	1450827_at 1453748_a_at 1455990_at	18961	-0.456	-0.0116	No
141	TUBB2C	1423642_at 1438622_x_at 1439416_x_at 1456031_at 1456078_x_at 1456470_x_at	19161	-0.503	-0.0172	No
142	DHFR	1419172_at 1430750_at	19889	-0.717	-0.0455	No
143	CDC45L	1416575_at 1457838_at	20026	-0.772	-0.0463	No
144	SGOL1	1418919_at 1439510_at	20121	-0.813	-0.0450	No
145	UBE2D1	1424062_at	20758	-1.180	-0.0659	No
146	PPP1CC	1440594_at	21199	-1.702	-0.0741	No
147	CSNK1E	1417175_at 1417176_at 1435373_at	21233	-1.757	-0.0633	No
148	MCM3	1420029_at 1426653_at	21359	-1.933	-0.0555	No
149	PSMD4	1418874_a_at 1425859_a_at 1451725_a_at	21536	-2.261	-0.0477	No
150	PSMD14	1421751_a_at 1446521_at 1457765_at 1459734_at	21877	-4.048	-0.0349	No
151	YWHAE	1426384_a_at 1426385_x_at 1435702_s_at 1438839_a_at 1440841_at 1457173_at	21918	-5.349	0.0008	No