Details for gene set NUCLEAR

Table: GSEA Results Summary

Dataset	set04_DMpreB_versus_WTpreB
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	NUCLEAR_PART
Enrichment Score (ES)	0.54838586
Normalized Enrichment Score (NES)	2.121509
Nominal p-value	0.0
FDR q-value	0.0
FWER p-Value	0.0

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDKN2A	0	56.485	0.0302	Yes
2	IKBKAP	25	21.409	0.0403	Yes
3	PCGF6	28	20.950	0.0514	Yes
4	CIRH1A	32	20.215	0.0621	Yes
5	NOL1	34	20.004	0.0727	Yes
6	RANBP5	52	18.961	0.0819	Yes
7	NOLA2	85	16.337	0.0889	Yes
8	GNL3	88	16.247	0.0974	Yes
9	NOL6	102	15.361	0.1049	Yes
10	RRP9	114	15.059	0.1124	Yes
11	RPP38	124	14.668	0.1197	Yes
12	SDAD1	143	14.223	0.1263	Yes
13	MYBBP1A	145	14.159	0.1339	Yes
14	EXOSC1	159	13.545	0.1404	Yes
15	ELP3	173	13.210	0.1467	Yes
16	MKI67IP	184	12.976	0.1531	Yes
17	POLR3H	187	12.912	0.1599	Yes
18	NUP133	197	12.787	0.1662	Yes
19	HSPD1	213	12.457	0.1721	Yes
20	SNRPD1	224	12.313	0.1781	Yes
21	U2AF1	252	11.890	0.1830	Yes
22	EFTUD2	276	11.639	0.1879	Yes
23	MPG	280	11.556	0.1940	Yes
24	RCC1	282	11.531	0.2001	Yes
25	WDHD1	295	11.340	0.2055	Yes
26	RAE1	304	11.233	0.2110	Yes
27	NOLA3	306	11.215	0.2170	Yes
28	SNRPF	315	11.120	0.2225	Yes
29	POLR1E	324	11.020	0.2279	Yes
30	GTF2H4	333	10.927	0.2333	Yes
31	LYAR	351	10.704	0.2381	Yes
32	SNRPD3	380	10.453	0.2422	Yes
33	GEMIN5	389	10.383	0.2473	Yes
34	CHAF1B	404	10.245	0.2520	Yes
35	EIF5A	422	10.060	0.2564	Yes
36	RUVBL2	427	10.004	0.2616	Yes
37	POLR2J	428	9.986	0.2669	Yes
38	MORF4L2	458	9.764	0.2705	Yes
39	PHF5A	464	9.691	0.2754	Yes
40	DDX21	475	9.625	0.2800	Yes
41	RAD51	478	9.610	0.2850	Yes
42	GEMIN6	494	9.487	0.2893	Yes
43	RUVBL1	508	9.419	0.2936	Yes
44	SNRPA1	509	9.418	0.2987	Yes
45	CDK8	527	9.306	0.3027	Yes
46	RPA2	529	9.268	0.3076	Yes
47	CPSF1	551	9.092	0.3113	Yes
48	TUBG1	553	9.071	0.3161	Yes
49	ASH2L	568	8.957	0.3201	Yes
50	TIMM50	578	8.888	0.3244	Yes
51	MRPL19	588	8.796	0.3286	Yes
52	NUP107	592	8.768	0.3331	Yes
53	ERCC8	611	8.663	0.3367	Yes
54	GTF3C3	623	8.578	0.3407	Yes
55	MCM7	624	8.576	0.3453	Yes
56	COIL	638	8.482	0.3491	Yes
57	NSUN2	652	8.381	0.3529	Yes
58	XRN2	700	8.032	0.3546	Yes
59	GEMIN4	714	7.991	0.3582	Yes
60	TXNL4A	731	7.838	0.3615	Yes
61	RPA1	738	7.796	0.3653	Yes
62	ERCC1	740	7.790	0.3694	Yes
63	ILF2	750	7.740	0.3731	Yes
64	KPNB1	763	7.679	0.3765	Yes
65	MCM3	785	7.561	0.3794	Yes
66	POP1	790	7.536	0.3832	Yes
67	HDAC6	793	7.530	0.3871	Yes
68	TIPIN	795	7.502	0.3911	Yes
69	SF3B3	797	7.489	0.3950	Yes
70	NCL	817	7.411	0.3979	Yes
71	SNRPG	825	7.378	0.4015	Yes
72	LSM4	831	7.332	0.4051	Yes
73	MRE11A	839	7.291	0.4086	Yes
74	SF3A3	843	7.271	0.4124	Yes
75	SNRPD2	844	7.271	0.4163	Yes
76	COPS2	855	7.199	0.4196	Yes
77	NOLC1	859	7.172	0.4232	Yes
78	IVNS1ABP	866	7.144	0.4267	Yes
79	RPP30	905	6.931	0.4283	Yes
80	NUTF2	909	6.922	0.4319	Yes
81	MSH2	911	6.898	0.4355	Yes
82	HTATIP2	933	6.808	0.4380	Yes
83	NARG1	952	6.729	0.4406	Yes
84	WDR4	971	6.589	0.4431	Yes
85	TRIM27	977	6.570	0.4464	Yes
86	NUP54	1023	6.376	0.4473	Yes
87	NBN	1037	6.340	0.4500	Yes
88	CHEK1	1080	6.140	0.4509	Yes
89	ASCC3L1	1088	6.111	0.4538	Yes
90	CHAF1A	1105	6.030	0.4562	Yes
91	POLR2E	1117	5.985	0.4588	Yes
92	BUB1B	1156	5.882	0.4598	Yes
93	HDAC1	1184	5.807	0.4614	Yes
94	NOL5A	1208	5.699	0.4632	Yes
95	SUV39H1	1211	5.672	0.4661	Yes
96	GTF2H1	1223	5.646	0.4686	Yes
97	PTGES3	1235	5.604	0.4710	Yes
98	PPARGC1B	1288	5.449	0.4710	Yes
99	SNUPN	1316	5.357	0.4724	Yes
100	PPIH	1351	5.249	0.4733	Yes
101	SURF6	1406	5.046	0.4731	Yes
102	MED4	1424	4.972	0.4748	Yes
103	SFRS2	1426	4.971	0.4774	Yes
104	SMARCC1	1454	4.892	0.4785	Yes
105	SNRPA	1459	4.879	0.4809	Yes
106	XPO7	1461	4.869	0.4834	Yes
107	PARP1	1488	4.782	0.4846	Yes
108	AAAS	1509	4.711	0.4860	Yes
109	SNRPB	1510	4.709	0.4885	Yes
110	BARD1	1513	4.699	0.4909	Yes
111	RPS19	1514	4.699	0.4934	Yes
112	SRP68	1516	4.698	0.4959	Yes
113	HDAC2	1571	4.579	0.4954	Yes
114	HDAC3	1591	4.535	0.4967	Yes
115	NUP50	1599	4.517	0.4988	Yes
116	GTF3C4	1625	4.445	0.4998	Yes
117	RPA3	1650	4.387	0.5008	Yes
118	LRPPRC	1712	4.259	0.4997	Yes
119	KRR1	1740	4.204	0.5005	Yes
120	FUSIP1	1750	4.189	0.5022	Yes
121	POLI	1779	4.107	0.5029	Yes
122	NKX2-5	1793	4.065	0.5043	Yes
123	OIP5	1828	4.008	0.5046	Yes
124	SLC29A2	1861	3.921	0.5050	Yes
125	BRE	1863	3.918	0.5070	Yes
126	POLR2A	1865	3.916	0.5090	Yes
127	BRCC3	1870	3.900	0.5109	Yes
128	SNRP70	1871	3.900	0.5130	Yes
129	PTBP1	1876	3.891	0.5148	Yes
130	TAF6	1890	3.865	0.5162	Yes
131	NAP1L1	1896	3.856	0.5180	Yes
132	KPNA2	1904	3.839	0.5196	Yes
133	SMARCE1	1925	3.809	0.5206	Yes
134	PRPF8	1947	3.762	0.5214	Yes
135	SMC3	1954	3.752	0.5231	Yes
136	HNRPDL	2005	3.662	0.5223	Yes
137	NUP62	2028	3.620	0.5231	Yes
138	EXOSC3	2041	3.593	0.5243	Yes
139	BCL2	2046	3.584	0.5260	Yes
140	HNRPM	2061	3.556	0.5271	Yes
141	SF3A1	2069	3.541	0.5286	Yes
142	HNRPH1	2090	3.508	0.5294	Yes
143	SIP1	2108	3.481	0.5304	Yes
144	ANAPC5	2140	3.428	0.5305	Yes
145	SUMO1	2147	3.411	0.5320	Yes
146	BCAS2	2155	3.399	0.5334	Yes
147	APTX	2163	3.385	0.5348	Yes
148	HNRPK	2188	3.346	0.5353	Yes
149	HDAC10	2204	3.315	0.5362	Yes
150	RANBP2	2207	3.299	0.5379	Yes
151	HMGA1	2217	3.288	0.5392	Yes
152	GTF2F1	2221	3.280	0.5408	Yes
153	IFI16	2264	3.217	0.5402	Yes
154	CLOCK	2282	3.189	0.5409	Yes
155	PRPF31	2286	3.181	0.5425	Yes
156	TDG	2301	3.159	0.5434	Yes
157	ERCC3	2325	3.123	0.5438	Yes
158	ZRSR2	2343	3.098	0.5445	Yes
159	CCNH	2354	3.077	0.5456	Yes
160	TAF5	2366	3.050	0.5466	Yes
161	NUP160	2376	3.042	0.5478	Yes
162	NAP1L4	2407	3.008	0.5477	Yes
163	TBP	2452	2.954	0.5469	Yes
164	TAF9	2463	2.938	0.5479	Yes
165	MSH6	2513	2.891	0.5468	Yes
166	SAP18	2531	2.860	0.5474	Yes
167	RPL3	2541	2.853	0.5484	Yes
168	DDX47	2624	2.762	0.5454	No
169	KLHDC3	2695	2.671	0.5429	No
170	ASNA1	2736	2.623	0.5421	No
171	POP7	2754	2.600	0.5426	No
172	MATR3	2756	2.596	0.5439	No
173	ANAPC4	2768	2.586	0.5447	No
174	EED	2787	2.570	0.5451	No
175	FOXF2	2815	2.547	0.5450	No
176	DHX15	2860	2.511	0.5439	No
177	TOP2A	2875	2.493	0.5445	No
178	MSH3	2895	2.476	0.5447	No
179	CPSF3	3069	2.318	0.5365	No
180	PRICKLE1	3160	2.243	0.5327	No
181	RAD50	3170	2.231	0.5334	No
182	MPHOSPH1	3219	2.205	0.5320	No
183	TAF12	3295	2.148	0.5290	No
184	EDF1	3347	2.111	0.5273	No
185	BNIP3	3349	2.109	0.5284	No
186	TIMELESS	3384	2.085	0.5276	No
187	NUP88	3388	2.080	0.5286	No
188	TAF11	3390	2.079	0.5296	No
189	SMC2	3392	2.077	0.5307	No
190	NPM1	3426	2.056	0.5300	No
191	TTN	3442	2.045	0.5302	No
192	KPNA3	3532	1.989	0.5264	No
193	TAF7	3583	1.956	0.5247	No
194	API5	3608	1.941	0.5244	No
195	GTF3C1	3662	1.908	0.5225	No
196	HOXC10	3673	1.899	0.5230	No
197	CHEK2	3684	1.894	0.5235	No
198	NR6A1	3687	1.892	0.5244	No
199	U2AF2	3699	1.888	0.5248	No
200	SNAPC4	3707	1.879	0.5254	No
201	SAP30	3983	1.747	0.5112	No
202	SF3B2	4038	1.720	0.5092	No
203	FMR1	4115	1.684	0.5059	No
204	EMG1	4137	1.671	0.5056	No
205	LRCH4	4251	1.610	0.5003	No
206	RPP40	4253	1.609	0.5011	No
207	SMC1A	4261	1.606	0.5015	No
208	NOL3	4715	1.423	0.4774	No
209	NUDT21	4724	1.421	0.4777	No
210	XRCC6	4750	1.409	0.4771	No
211	PTF1A	4836	1.382	0.4732	No
212	UBE2I	4851	1.375	0.4731	No
213	BRCA1	5015	1.321	0.4649	No
214	TERF2IP	5050	1.302	0.4637	No
215	NPAS2	5069	1.297	0.4634	No
216	TCOF1	5108	1.286	0.4620	No
217	CDC26	5143	1.273	0.4608	No
218	ACTB	5156	1.269	0.4608	No
219	SF3A2	5229	1.247	0.4576	No
220	SMARCA5	5351	1.203	0.4516	No
221	PTGER3	5415	1.182	0.4487	No
222	POLR3C	5436	1.177	0.4482	No
223	TPR	5446	1.175	0.4484	No
224	HIF1A	5533	1.149	0.4443	No
225	FOXE3	5671	1.101	0.4373	No
226	SMARCB1	5697	1.093	0.4365	No
227	EXOSC10	5709	1.091	0.4365	No
228	DDX11	5792	1.064	0.4326	No
229	PAX8	5833	1.051	0.4309	No
230	CDC23	5846	1.048	0.4308	No
231	DDX19B	5888	1.036	0.4291	No
232	BNIP1	5899	1.034	0.4291	No
233	MED6	5923	1.028	0.4284	No
234	GTF3C5	5990	1.010	0.4253	No
235	ZNF638	6030	0.996	0.4237	No
236	SNW1	6126	0.966	0.4190	No
237	SCRN1	6186	0.947	0.4163	No
238	NEK11	6213	0.937	0.4154	No
239	NF2	6298	0.912	0.4112	No
240	KLHL7	6316	0.907	0.4108	No
241	PRM2	6374	0.890	0.4081	No
242	NXT1	6375	0.890	0.4086	No
243	FOXC1	6382	0.887	0.4087	No
244	XPO1	6402	0.881	0.4082	No
245	GRINL1A	6523	0.847	0.4020	No
246	CBX1	6546	0.838	0.4013	No
247	POLQ	6646	0.813	0.3963	No
248	RBM14	6679	0.803	0.3949	No
249	NAP1L3	6770	0.782	0.3904	No
250	LMNB1	6772	0.781	0.3908	No
251	GCM1	6979	0.728	0.3798	No
252	NOL4	6985	0.727	0.3799	No
253	WRN	7015	0.720	0.3787	No
254	GNAZ	7134	0.689	0.3726	No
255	TAF4	7198	0.674	0.3695	No
256	GUCY2F	7328	0.635	0.3628	No
257	POLH	7364	0.626	0.3612	No
258	RANGAP1	7372	0.623	0.3611	No
259	SMARCD3	7660	0.549	0.3456	No
260	POLR3K	7847	0.497	0.3357	No
261	DDX56	8062	0.443	0.3242	No
262	PAM	8094	0.434	0.3227	No
263	HNRPF	8452	0.348	0.3033	No
264	KPNA1	8491	0.339	0.3013	No
265	DHX8	8559	0.322	0.2978	No
266	CENPF	8697	0.291	0.2905	No
267	RPL36	8792	0.265	0.2854	No
268	ATXN3	8846	0.253	0.2827	No
269	NUP98	8877	0.247	0.2811	No
270	NUP153	9114	0.191	0.2683	No
271	PMF1	9169	0.178	0.2654	No
272	TEP1	9334	0.137	0.2565	No
273	NAP1L2	9352	0.130	0.2556	No
274	SMAD2	9357	0.129	0.2554	No
275	TERT	9374	0.126	0.2546	No
276	HTATIP	9576	0.075	0.2436	No
277	TOPBP1	9684	0.052	0.2378	No
278	UBTF	9695	0.050	0.2373	No
279	TFIP11	9725	0.043	0.2357	No
280	POLA1	9763	0.033	0.2337	No
281	FIGLA	9828	0.015	0.2302	No
282	ATXN1	9960	-0.022	0.2230	No
283	SHFM1	10009	-0.034	0.2203	No
284	HIPK2	10073	-0.050	0.2169	No
285	ANAPC11	10164	-0.071	0.2120	No
286	EXOSC9	10231	-0.084	0.2084	No
287	DMC1	10246	-0.090	0.2077	No
288	EPAS1	10308	-0.103	0.2044	No
289	OGG1	10311	-0.104	0.2043	No
290	PURA	10326	-0.109	0.2036	No
291	NCR1	10448	-0.142	0.1971	No
292	TMPO	10614	-0.182	0.1881	No
293	DHCR7	10786	-0.231	0.1788	No
294	NFYC	10850	-0.248	0.1755	No
295	RSF1	10959	-0.277	0.1697	No
296	SREBF1	10988	-0.284	0.1683	No
297	ELP4	11072	-0.312	0.1639	No
298	TOP2B	11162	-0.335	0.1592	No
299	IPO7	11203	-0.344	0.1572	No
300	HNRPH2	11393	-0.398	0.1470	No
301	NUFIP1	11468	-0.416	0.1432	No
302	SF3B4	11535	-0.436	0.1398	No
303	ING2	11841	-0.516	0.1233	No
304	PITX2	11869	-0.524	0.1221	No
305	THRAP3	11870	-0.524	0.1224	No
306	TOPORS	11953	-0.547	0.1181	No
307	HMGB2	12173	-0.613	0.1064	No
308	DNAJB9	12176	-0.614	0.1067	No
309	NPC1	12271	-0.642	0.1018	No
310	RPS7	12330	-0.657	0.0990	No
311	CHMP1A	12616	-0.751	0.0837	No
312	GLIS2	12693	-0.777	0.0800	No
313	NDUFA13	12943	-0.850	0.0667	No
314	MYO6	12951	-0.853	0.0668	No
315	PDCD7	12974	-0.863	0.0661	No
316	NPM2	13180	-0.941	0.0553	No
317	NLRP5	13220	-0.955	0.0537	No
318	CBX5	13421	-1.026	0.0432	No
319	FGF18	13453	-1.041	0.0421	No
320	DNMT3A	13484	-1.060	0.0410	No
321	ZNF346	13558	-1.088	0.0376	No
322	SP100	13738	-1.150	0.0283	No
323	TAF6L	13802	-1.183	0.0255	No
324	DEDD	13840	-1.198	0.0241	No
325	POLR2B	13857	-1.203	0.0239	No
326	SFRS2IP	13951	-1.244	0.0194	No
327	RTCD1	13988	-1.260	0.0181	No
328	TOP1	14010	-1.275	0.0176	No
329	ATRX	14036	-1.290	0.0170	No
330	SNRPB2	14044	-1.295	0.0173	No
331	H2AFY	14218	-1.376	0.0085	No
332	GTF3C2	14404	-1.475	-0.0009	No
333	ZBTB16	14618	-1.590	-0.0117	No
334	SMG6	14640	-1.602	-0.0120	No
335	MED12	14662	-1.619	-0.0123	No
336	HDAC8	14739	-1.655	-0.0156	No
337	HDAC11	14768	-1.672	-0.0163	No
338	PPARGC1A	14798	-1.685	-0.0170	No
339	SPTBN4	14842	-1.712	-0.0184	No
340	RBBP5	14884	-1.737	-0.0197	No
341	RALY	14966	-1.790	-0.0232	No
342	KIN	14985	-1.804	-0.0232	No
343	ABL1	15068	-1.862	-0.0268	No
344	HNRPUL1	15081	-1.869	-0.0264	No
345	PHB	15131	-1.901	-0.0281	No
346	ZNF148	15148	-1.912	-0.0280	No
347	SNRPN	15192	-1.940	-0.0293	No
348	RPL11	15196	-1.947	-0.0284	No
349	DDX24	15243	-1.972	-0.0299	No
350	ARID4A	15277	-1.998	-0.0306	No
351	CIB1	15306	-2.027	-0.0311	No
352	INTS6	15309	-2.029	-0.0301	No
353	XRCC4	15353	-2.065	-0.0314	No
354	NCOA6	15397	-2.110	-0.0326	No
355	PHF21A	15432	-2.144	-0.0333	No
356	EMD	15559	-2.264	-0.0390	No
357	SMARCD1	15565	-2.267	-0.0381	No
358	DYRK1A	15661	-2.363	-0.0421	No
359	RBPJ	15704	-2.406	-0.0431	No
360	MCRS1	15887	-2.599	-0.0517	No
361	SMARCA4	15900	-2.615	-0.0510	No
362	ELL2	15903	-2.618	-0.0497	No
363	DULLARD	15956	-2.689	-0.0511	No
364	MPHOSPH10	16016	-2.759	-0.0529	No
365	PHF12	16088	-2.848	-0.0552	No
366	FZR1	16130	-2.894	-0.0559	No
367	ISG20	16204	-3.014	-0.0583	No
368	ACTL6A	16320	-3.211	-0.0629	No
369	REPIN1	16397	-3.336	-0.0653	No
370	TAF10	16432	-3.429	-0.0654	No
371	SENP2	16449	-3.450	-0.0644	No
372	RB1	16538	-3.642	-0.0673	No
373	NFYA	16546	-3.657	-0.0657	No
374	STAG3	16581	-3.729	-0.0656	No
375	ELF4	16652	-3.860	-0.0674	No
376	RGS12	16654	-3.861	-0.0654	No
377	ARID1A	16672	-3.903	-0.0642	No
378	TAF13	16676	-3.906	-0.0623	No
379	RPL35	16681	-3.914	-0.0604	No
380	NOD2	16750	-4.088	-0.0620	No
381	MEN1	16754	-4.105	-0.0600	No
382	JUN	16845	-4.286	-0.0626	No
383	HES6	17030	-4.659	-0.0702	No
384	LBR	17031	-4.663	-0.0677	No
385	SMARCD2	17074	-4.793	-0.0675	No
386	PSEN1	17090	-4.855	-0.0657	No
387	ERCC4	17104	-4.906	-0.0638	No
388	GEMIN7	17110	-4.929	-0.0615	No
389	BNIP3L	17145	-5.009	-0.0606	No
390	BNIP2	17184	-5.124	-0.0600	No
391	HDAC9	17200	-5.177	-0.0581	No
392	CCNT1	17230	-5.267	-0.0568	No
393	CDK9	17316	-5.519	-0.0586	No
394	WTAP	17367	-5.699	-0.0583	No
395	RELA	17416	-5.813	-0.0578	No
396	EZH2	17453	-5.929	-0.0566	No
397	HRB	17498	-6.026	-0.0558	No
398	HDAC5	17543	-6.221	-0.0549	No
399	SMUG1	17585	-6.373	-0.0537	No
400	PURB	17595	-6.397	-0.0508	No
401	NFYB	17598	-6.408	-0.0475	No
402	YEATS4	17621	-6.498	-0.0452	No
403	DDX54	17676	-6.668	-0.0446	No
404	ERCC5	17722	-6.808	-0.0435	No
405	HDAC7A	17780	-7.070	-0.0428	No
406	ASF1A	17858	-7.457	-0.0431	No
407	PSEN2	17891	-7.601	-0.0408	No
408	RTN4	17896	-7.650	-0.0369	No
409	MDM2	17915	-7.730	-0.0337	No
410	PPP1R9B	17968	-8.059	-0.0323	No
411	SMAD4	17972	-8.110	-0.0281	No
412	ARNTL	17981	-8.187	-0.0242	No
413	ERCC2	17986	-8.207	-0.0200	No
414	HCLS1	18007	-8.321	-0.0167	No
415	RBM39	18029	-8.464	-0.0133	No
416	LMO4	18158	-9.497	-0.0153	No
417	GIT2	18162	-9.579	-0.0103	No
418	LIG4	18215	-10.085	-0.0078	No
419	PML	18233	-10.280	-0.0032	No
420	DEDD2	18241	-10.334	0.0019	No
421	EPC1	18267	-10.496	0.0062	No
422	NRM	18343	-11.493	0.0082	No
423	TP53	18395	-12.652	0.0121	No