Details for gene set V$NERF

Table: GSEA Results Summary

Dataset	set03_absentNotch_versus_wtNotch
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_neg
GeneSet	V$NERF_Q2
Enrichment Score (ES)	-0.3086141
Normalized Enrichment Score (NES)	-1.4924318
Nominal p-value	0.0
FDR q-value	0.47846764
FWER p-Value	0.993

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	FREQ	1	5.316	0.0317	No
2	PCDH7	101	2.871	0.0435	No
3	ELK3	135	2.732	0.0580	No
4	FCGR2B	146	2.702	0.0736	No
5	HN1	197	2.521	0.0859	No
6	SLITRK6	288	2.347	0.0950	No
7	EXTL2	830	1.798	0.0765	No
8	STARD8	940	1.730	0.0809	No
9	ZNF23	968	1.716	0.0897	No
10	LST1	1542	1.466	0.0673	No
11	SLCO2B1	1657	1.421	0.0696	No
12	RPS3	1932	1.338	0.0628	No
13	VCL	2133	1.276	0.0596	No
14	ELOVL5	2300	1.236	0.0579	No
15	NDUFS2	2339	1.227	0.0632	No
16	DIABLO	2418	1.202	0.0662	No
17	STARD13	2435	1.197	0.0724	No
18	CALM2	2679	1.139	0.0661	No
19	BCOR	2691	1.135	0.0723	No
20	MYOHD1	2740	1.122	0.0763	No
21	ARHGAP8	2909	1.077	0.0737	No
22	TCF12	2991	1.060	0.0756	No
23	MAP2K6	3057	1.047	0.0783	No
24	LRRFIP2	3172	1.023	0.0783	No
25	SHC3	3316	0.993	0.0764	No
26	FGFR2	3452	0.964	0.0749	No
27	CDCA3	3527	0.952	0.0766	No
28	LSAMP	3802	0.894	0.0670	No
29	LOXL3	3847	0.884	0.0699	No
30	SECISBP2	3963	0.860	0.0688	No
31	SLC30A7	4070	0.839	0.0681	No
32	ATOH8	4098	0.833	0.0716	No
33	GPR132	4179	0.816	0.0721	No
34	NFATC3	4333	0.790	0.0686	No
35	NRXN3	4602	0.737	0.0584	No
36	FKBP10	4657	0.729	0.0599	No
37	KCND1	4669	0.727	0.0636	No
38	PAK3	4763	0.711	0.0628	No
39	TUSC3	5017	0.665	0.0531	No
40	CD79B	5023	0.664	0.0568	No
41	SH3TC1	5064	0.659	0.0585	No
42	FURIN	5206	0.633	0.0547	No
43	DPP8	5254	0.624	0.0559	No
44	TENC1	5288	0.618	0.0578	No
45	ATP5H	5434	0.591	0.0534	No
46	ITPKB	5450	0.587	0.0561	No
47	PAX6	5531	0.576	0.0552	No
48	HOXB9	5662	0.557	0.0515	No
49	GOLGA7	5860	0.523	0.0439	No
50	TOPORS	5909	0.517	0.0444	No
51	CD79A	5965	0.506	0.0445	No
52	CNTNAP1	5967	0.506	0.0474	No
53	JAG1	6440	0.437	0.0244	No
54	KLF13	7314	0.313	-0.0210	No
55	UCHL5	7374	0.304	-0.0224	No
56	ARRB2	7604	0.270	-0.0332	No
57	MMRN2	7638	0.264	-0.0334	No
58	FCER1G	7652	0.263	-0.0325	No
59	TRO	7956	0.210	-0.0477	No
60	ACTR3	7961	0.210	-0.0467	No
61	CAP1	8034	0.201	-0.0494	No
62	CPNE8	8194	0.176	-0.0569	No
63	CDK5	8499	0.131	-0.0726	No
64	EFNA1	8635	0.111	-0.0793	No
65	HYAL2	8662	0.108	-0.0801	No
66	POU4F3	8933	0.059	-0.0943	No
67	UBTF	8980	0.050	-0.0965	No
68	CHD2	9028	0.042	-0.0988	No
69	GRM3	9151	0.022	-0.1053	No
70	PTPRN	9169	0.019	-0.1061	No
71	TWIST1	9173	0.019	-0.1062	No
72	SDCCAG8	9254	0.008	-0.1105	No
73	RHOV	9348	-0.008	-0.1155	No
74	BTBD12	9565	-0.041	-0.1269	No
75	UQCRH	9605	-0.046	-0.1288	No
76	FOSL1	10083	-0.121	-0.1539	No
77	CLIC1	10110	-0.126	-0.1545	No
78	DDIT3	10339	-0.163	-0.1659	No
79	CAMK1D	10688	-0.217	-0.1835	No
80	STAT5B	10701	-0.218	-0.1828	No
81	PEX16	10979	-0.257	-0.1963	No
82	TFRC	10982	-0.257	-0.1949	No
83	CNNM1	11065	-0.271	-0.1977	No
84	OLFML2A	11075	-0.272	-0.1966	No
85	DPP3	11105	-0.276	-0.1965	No
86	EGR3	11317	-0.308	-0.2061	No
87	PLCB2	11724	-0.375	-0.2259	No
88	PEX11B	11756	-0.380	-0.2253	No
89	HOXC4	11823	-0.391	-0.2265	No
90	LYL1	12059	-0.430	-0.2367	No
91	MDFI	12244	-0.459	-0.2439	No
92	MAP4K1	12297	-0.468	-0.2440	No
93	ADAMTS4	12597	-0.520	-0.2571	No
94	LAT	12618	-0.523	-0.2550	No
95	LYPLA2	12660	-0.529	-0.2541	No
96	ARHGDIB	12754	-0.547	-0.2559	No
97	ATP1A1	12805	-0.555	-0.2553	No
98	PIK3CG	13006	-0.586	-0.2626	No
99	NLK	13271	-0.634	-0.2731	No
100	IKBKB	13552	-0.685	-0.2842	No
101	USP5	13697	-0.710	-0.2878	No
102	SLC4A2	13702	-0.711	-0.2838	No
103	MCTS1	13796	-0.728	-0.2844	No
104	TRAPPC3	14000	-0.764	-0.2909	No
105	ROM1	14166	-0.798	-0.2951	No
106	LANCL1	14417	-0.846	-0.3036	Yes
107	ST7L	14422	-0.847	-0.2987	Yes
108	GGTL3	14524	-0.863	-0.2990	Yes
109	NFIA	14603	-0.878	-0.2980	Yes
110	HMGN2	14645	-0.885	-0.2950	Yes
111	PTPN6	14685	-0.894	-0.2918	Yes
112	POLD4	14732	-0.904	-0.2888	Yes
113	ZHX2	14736	-0.906	-0.2836	Yes
114	CAPZA1	14759	-0.909	-0.2794	Yes
115	TLN1	14857	-0.932	-0.2791	Yes
116	BMP4	15124	-0.993	-0.2876	Yes
117	MAPK3	15232	-1.017	-0.2873	Yes
118	TPP2	15316	-1.036	-0.2856	Yes
119	AGPAT1	15386	-1.053	-0.2830	Yes
120	DOK1	15402	-1.057	-0.2775	Yes
121	POU6F2	15495	-1.078	-0.2761	Yes
122	TGIF2	15528	-1.087	-0.2713	Yes
123	RASA1	15574	-1.098	-0.2672	Yes
124	SEMA4C	15588	-1.101	-0.2614	Yes
125	JUNB	15718	-1.135	-0.2616	Yes
126	C1QTNF6	15950	-1.201	-0.2669	Yes
127	TMEM4	15966	-1.204	-0.2606	Yes
128	ROBO4	15997	-1.210	-0.2550	Yes
129	SRPR	16003	-1.212	-0.2480	Yes
130	STAT5A	16004	-1.212	-0.2408	Yes
131	LYN	16042	-1.220	-0.2355	Yes
132	HCLS1	16112	-1.239	-0.2318	Yes
133	GMFB	16116	-1.240	-0.2246	Yes
134	UBE2L3	16319	-1.300	-0.2278	Yes
135	RPS6KA4	16321	-1.301	-0.2201	Yes
136	BAZ2A	16358	-1.312	-0.2142	Yes
137	ITPR3	16442	-1.342	-0.2107	Yes
138	FXYD5	16472	-1.350	-0.2042	Yes
139	CENTD2	16608	-1.394	-0.2032	Yes
140	PIGW	16652	-1.411	-0.1971	Yes
141	MPL	16734	-1.442	-0.1929	Yes
142	NTRK3	16756	-1.450	-0.1853	Yes
143	NPY	16977	-1.532	-0.1881	Yes
144	PPP1R9B	17073	-1.577	-0.1839	Yes
145	SPRED2	17144	-1.603	-0.1781	Yes
146	PITX2	17203	-1.627	-0.1715	Yes
147	SALL1	17215	-1.632	-0.1624	Yes
148	HTF9C	17223	-1.635	-0.1530	Yes
149	CREB3	17287	-1.658	-0.1465	Yes
150	RASAL1	17309	-1.669	-0.1377	Yes
151	ERG	17385	-1.700	-0.1316	Yes
152	DEF6	17448	-1.731	-0.1246	Yes
153	RANBP1	17466	-1.738	-0.1152	Yes
154	FBS1	17496	-1.753	-0.1063	Yes
155	CORO1A	17617	-1.818	-0.1019	Yes
156	EBAG9	17622	-1.821	-0.0913	Yes
157	SNCG	17632	-1.827	-0.0809	Yes
158	HMGA1	17771	-1.910	-0.0769	Yes
159	RBBP7	17815	-1.941	-0.0677	Yes
160	HIC1	17921	-2.010	-0.0614	Yes
161	FGR	18013	-2.084	-0.0539	Yes
162	MID1	18092	-2.165	-0.0452	Yes
163	SH2D2A	18208	-2.294	-0.0377	Yes
164	FBXO36	18219	-2.311	-0.0244	Yes
165	ZFPM1	18225	-2.318	-0.0109	Yes
166	FLT1	18379	-2.543	-0.0040	Yes
167	RGS3	18468	-2.810	0.0080	Yes