Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	set03_absentNotch_versus_wtNotch
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	V$E2F_02
Enrichment Score (ES)	0.31793725
Normalized Enrichment Score (NES)	1.5402683
Nominal p-value	0.0023980816
FDR q-value	0.21724477
FWER p-Value	0.92

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SLCO3A1	9	3.858	0.0263	Yes
2	TMPO	206	2.509	0.0331	Yes
3	SOAT1	222	2.471	0.0494	Yes
4	AP4M1	342	2.272	0.0587	Yes
5	RRM2	460	2.111	0.0670	Yes
6	PCSK1	688	1.892	0.0679	Yes
7	DCK	759	1.842	0.0769	Yes
8	SYNCRIP	800	1.816	0.0873	Yes
9	HNRPUL1	859	1.779	0.0965	Yes
10	UGCGL1	916	1.742	0.1055	Yes
11	PPM1D	921	1.739	0.1174	Yes
12	DMD	1017	1.693	0.1240	Yes
13	PRPF4B	1042	1.679	0.1343	Yes
14	NASP	1088	1.655	0.1434	Yes
15	GSPT1	1127	1.638	0.1527	Yes
16	AK2	1204	1.610	0.1598	Yes
17	STAG1	1259	1.586	0.1678	Yes
18	CLSPN	1307	1.565	0.1761	Yes
19	ZCCHC8	1318	1.559	0.1864	Yes
20	FANCD2	1382	1.532	0.1936	Yes
21	MAPK6	1414	1.518	0.2025	Yes
22	FMO4	1493	1.484	0.2086	Yes
23	HNRPR	1504	1.479	0.2183	Yes
24	CDC5L	1532	1.468	0.2270	Yes
25	ALDH6A1	1592	1.445	0.2338	Yes
26	E2F1	1635	1.430	0.2415	Yes
27	KCNA6	1847	1.363	0.2395	Yes
28	EFNA5	1856	1.361	0.2485	Yes
29	EIF4A1	1897	1.349	0.2557	Yes
30	BRPF1	2088	1.289	0.2544	Yes
31	E2F3	2258	1.247	0.2539	Yes
32	ATAD2	2289	1.238	0.2608	Yes
33	HNRPA2B1	2340	1.227	0.2666	Yes
34	CCNT1	2381	1.215	0.2729	Yes
35	SUMO1	2406	1.205	0.2799	Yes
36	MCM6	2453	1.194	0.2857	Yes
37	STMN1	2624	1.152	0.2845	Yes
38	NUP62	2671	1.140	0.2899	Yes
39	IL4I1	2692	1.135	0.2967	Yes
40	CDC25A	2714	1.129	0.3034	Yes
41	PIM1	2766	1.112	0.3084	Yes
42	PHC1	2769	1.111	0.3160	Yes
43	POLE4	3056	1.048	0.3078	Yes
44	ADAMTS2	3063	1.046	0.3147	Yes
45	SP3	3414	0.970	0.3025	Yes
46	NELL2	3473	0.960	0.3060	Yes
47	MAZ	3530	0.950	0.3095	Yes
48	ACO2	3645	0.928	0.3098	Yes
49	TBX6	3971	0.859	0.2982	Yes
50	HIST1H2AH	3995	0.853	0.3028	Yes
51	AP1S1	4069	0.839	0.3047	Yes
52	POLD3	4230	0.807	0.3016	Yes
53	RBL1	4268	0.802	0.3052	Yes
54	CDCA7	4477	0.762	0.2992	Yes
55	USP37	4545	0.747	0.3008	Yes
56	SMAD6	4570	0.743	0.3046	Yes
57	MSH2	4630	0.732	0.3065	Yes
58	GATA1	4707	0.719	0.3074	Yes
59	PCNA	4714	0.717	0.3120	Yes
60	PTMA	4759	0.712	0.3146	Yes
61	MCM3	4847	0.696	0.3147	Yes
62	POU4F1	4877	0.691	0.3179	Yes
63	SFRS1	4978	0.672	0.3172	No
64	MCM7	5099	0.651	0.3152	No
65	GLRA3	5385	0.600	0.3039	No
66	RET	5506	0.579	0.3014	No
67	PAX6	5531	0.576	0.3041	No
68	H2AFZ	5580	0.570	0.3055	No
69	NOLC1	5594	0.568	0.3087	No
70	CDC6	5894	0.519	0.2961	No
71	UNG	5931	0.513	0.2977	No
72	E2F7	6488	0.431	0.2706	No
73	MRPL40	6516	0.426	0.2721	No
74	ASXL2	6635	0.407	0.2685	No
75	CORT	6919	0.364	0.2557	No
76	GABRB3	6952	0.359	0.2565	No
77	MCM2	7293	0.316	0.2403	No
78	MCM8	7327	0.310	0.2406	No
79	ACBD6	7332	0.310	0.2426	No
80	FANCG	7469	0.291	0.2372	No
81	EED	7557	0.277	0.2344	No
82	YBX2	7771	0.242	0.2246	No
83	PAQR4	7848	0.230	0.2221	No
84	BRMS1L	8178	0.178	0.2055	No
85	GPRC5B	8223	0.171	0.2043	No
86	ARHGAP6	8293	0.159	0.2016	No
87	HOXC10	8335	0.155	0.2005	No
88	PODN	8461	0.135	0.1947	No
89	MCM4	8519	0.128	0.1925	No
90	MYH10	8722	0.098	0.1822	No
91	MAP3K7	8801	0.083	0.1786	No
92	SNRPD1	8889	0.067	0.1743	No
93	DNAJC9	9212	0.014	0.1570	No
94	RQCD1	9230	0.011	0.1561	No
95	ZBTB4	9308	-0.002	0.1520	No
96	MXD3	9408	-0.018	0.1467	No
97	CASP8AP2	9448	-0.024	0.1448	No
98	NR6A1	9524	-0.034	0.1409	No
99	TYRO3	9726	-0.063	0.1305	No
100	PEG3	9754	-0.067	0.1295	No
101	KCNS2	9842	-0.083	0.1254	No
102	IPO7	10142	-0.131	0.1101	No
103	GMNN	10331	-0.162	0.1010	No
104	MYC	10365	-0.168	0.1004	No
105	EPHB1	10537	-0.192	0.0925	No
106	FHOD1	10617	-0.205	0.0896	No
107	HNRPD	10729	-0.223	0.0851	No
108	HIST1H4A	11112	-0.277	0.0664	No
109	SFRS7	11184	-0.287	0.0645	No
110	POLE2	11190	-0.288	0.0662	No
111	SLC9A7	11281	-0.301	0.0635	No
112	EZH2	11406	-0.323	0.0590	No
113	TOPBP1	11767	-0.382	0.0421	No
114	PLAGL1	12028	-0.425	0.0310	No
115	PRPS1	12299	-0.469	0.0196	No
116	HIST1H2BK	12338	-0.475	0.0209	No
117	GRIA4	12478	-0.499	0.0168	No
118	STK35	12802	-0.555	0.0032	No
119	ILF3	13175	-0.616	-0.0127	No
120	POLD1	13228	-0.625	-0.0112	No
121	NRK	13472	-0.668	-0.0197	No
122	SFRS10	13553	-0.685	-0.0193	No
123	PRKDC	14056	-0.776	-0.0411	No
124	DNMT1	14281	-0.817	-0.0476	No
125	H2AFV	14284	-0.818	-0.0420	No
126	FKBP5	14370	-0.835	-0.0408	No
127	PHF5A	14691	-0.894	-0.0520	No
128	TRIM39	14747	-0.907	-0.0486	No
129	NCL	14769	-0.911	-0.0435	No
130	PHF15	14995	-0.962	-0.0490	No
131	STAG2	15018	-0.967	-0.0434	No
132	POLR2A	15376	-1.050	-0.0555	No
133	HS6ST3	15550	-1.094	-0.0573	No
134	RPS20	15636	-1.114	-0.0541	No
135	SYNGR4	15722	-1.136	-0.0509	No
136	FANCC	15877	-1.179	-0.0510	No
137	ATF5	15959	-1.202	-0.0471	No
138	PRPS2	16145	-1.248	-0.0484	No
139	HCN3	16273	-1.286	-0.0464	No
140	CBX3	16631	-1.403	-0.0560	No
141	ARID4A	16716	-1.434	-0.0506	No
142	MAPT	16892	-1.502	-0.0497	No
143	ING3	16975	-1.531	-0.0435	No
144	MSH5	17126	-1.597	-0.0405	No
145	RPS6KA5	17160	-1.611	-0.0311	No
146	HTF9C	17223	-1.635	-0.0232	No
147	USP52	17265	-1.649	-0.0139	No
148	FBXO5	17271	-1.651	-0.0028	No
149	SUV39H1	17331	-1.679	0.0057	No
150	SEMA6A	17332	-1.679	0.0173	No
151	RANBP1	17466	-1.738	0.0222	No
152	HIRA	17766	-1.908	0.0192	No
153	HMGA1	17771	-1.910	0.0323	No
154	TLE3	17804	-1.936	0.0440	No