Details for gene set NUCLEAR

Table: GSEA Results Summary

Dataset	set03_absentNotch_versus_truncNotch
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	NUCLEAR_PART
Enrichment Score (ES)	0.37084892
Normalized Enrichment Score (NES)	1.9754286
Nominal p-value	0.0
FDR q-value	0.019549618
FWER p-Value	0.246

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	EPC1	13	6.642	0.0076	Yes
2	LBR	43	5.600	0.0130	Yes
3	NUP107	61	5.358	0.0188	Yes
4	MDM2	90	5.019	0.0235	Yes
5	TMPO	124	4.809	0.0277	Yes
6	NFYB	128	4.777	0.0335	Yes
7	IVNS1ABP	152	4.681	0.0381	Yes
8	MKI67IP	227	4.438	0.0396	Yes
9	CDK8	229	4.436	0.0451	Yes
10	SMAD4	241	4.376	0.0499	Yes
11	PRICKLE1	261	4.302	0.0543	Yes
12	EED	277	4.265	0.0588	Yes
13	TAF5	283	4.253	0.0638	Yes
14	GNL3	285	4.251	0.0691	Yes
15	RTN4	299	4.226	0.0737	Yes
16	HDAC2	308	4.192	0.0785	Yes
17	SUMO1	342	4.114	0.0818	Yes
18	CCNT1	351	4.084	0.0865	Yes
19	HNRPDL	357	4.077	0.0913	Yes
20	KPNB1	374	4.033	0.0954	Yes
21	DHX15	394	3.982	0.0994	Yes
22	HNRPK	396	3.977	0.1043	Yes
23	BNIP2	420	3.922	0.1079	Yes
24	SDAD1	422	3.918	0.1128	Yes
25	SMARCC1	437	3.892	0.1169	Yes
26	ANAPC4	439	3.891	0.1217	Yes
27	SMARCE1	488	3.804	0.1238	Yes
28	HNRPM	503	3.772	0.1278	Yes
29	XRCC6	540	3.704	0.1304	Yes
30	MED6	593	3.629	0.1321	Yes
31	LYAR	599	3.620	0.1363	Yes
32	GTF2H1	632	3.579	0.1391	Yes
33	TPR	635	3.575	0.1434	Yes
34	DDX47	638	3.567	0.1478	Yes
35	NUP88	640	3.558	0.1522	Yes
36	TAF13	680	3.499	0.1544	Yes
37	TOPORS	741	3.404	0.1554	Yes
38	PARP1	762	3.364	0.1585	Yes
39	KPNA2	779	3.339	0.1618	Yes
40	SFRS2IP	788	3.326	0.1655	Yes
41	SF3A3	808	3.301	0.1686	Yes
42	NAP1L4	813	3.292	0.1725	Yes
43	SMAD2	827	3.278	0.1758	Yes
44	NOL5A	833	3.271	0.1797	Yes
45	SFRS2	836	3.269	0.1836	Yes
46	SMG6	838	3.266	0.1877	Yes
47	POLH	839	3.265	0.1917	Yes
48	GTF3C2	850	3.248	0.1953	Yes
49	NSUN2	892	3.194	0.1970	Yes
50	DDX21	902	3.184	0.2005	Yes
51	NFYA	906	3.180	0.2043	Yes
52	HNRPH1	909	3.176	0.2082	Yes
53	CCNH	910	3.175	0.2121	Yes
54	RB1	929	3.152	0.2151	Yes
55	POLR3K	942	3.134	0.2183	Yes
56	ZRSR2	1029	3.057	0.2174	Yes
57	SENP2	1057	3.020	0.2197	Yes
58	RPA1	1068	3.013	0.2229	Yes
59	PTGES3	1094	2.987	0.2253	Yes
60	RPA3	1097	2.986	0.2289	Yes
61	ARID1A	1116	2.949	0.2316	Yes
62	ACTL6A	1125	2.939	0.2349	Yes
63	API5	1130	2.938	0.2383	Yes
64	NCOA6	1153	2.917	0.2408	Yes
65	MSH6	1182	2.894	0.2428	Yes
66	NUP54	1206	2.875	0.2452	Yes
67	PCGF6	1231	2.845	0.2474	Yes
68	SMC1A	1251	2.831	0.2499	Yes
69	HSPD1	1261	2.819	0.2529	Yes
70	OIP5	1348	2.743	0.2516	Yes
71	SAP30	1368	2.726	0.2540	Yes
72	TAF11	1472	2.628	0.2516	Yes
73	MORF4L2	1477	2.623	0.2547	Yes
74	PRPF31	1500	2.593	0.2567	Yes
75	GTF3C4	1516	2.586	0.2591	Yes
76	KIN	1521	2.581	0.2621	Yes
77	MYO6	1587	2.523	0.2617	Yes
78	SHFM1	1611	2.502	0.2636	Yes
79	MED12	1641	2.479	0.2651	Yes
80	TBP	1642	2.479	0.2682	Yes
81	TOP1	1664	2.462	0.2701	Yes
82	YEATS4	1687	2.442	0.2720	Yes
83	CHEK2	1690	2.441	0.2749	Yes
84	CDKN2A	1697	2.434	0.2776	Yes
85	HNRPUL1	1736	2.408	0.2785	Yes
86	IKBKAP	1752	2.397	0.2807	Yes
87	CDC23	1753	2.396	0.2837	Yes
88	RSF1	1765	2.387	0.2861	Yes
89	ILF2	1776	2.378	0.2885	Yes
90	NUP160	1803	2.361	0.2900	Yes
91	RBM39	1819	2.350	0.2921	Yes
92	BUB1B	1873	2.305	0.2921	Yes
93	INTS6	1881	2.298	0.2946	Yes
94	EXOSC1	1893	2.289	0.2969	Yes
95	HDAC1	1894	2.288	0.2997	Yes
96	ING2	1902	2.285	0.3022	Yes
97	NUP50	1918	2.274	0.3042	Yes
98	KPNA3	1922	2.272	0.3069	Yes
99	WDHD1	1926	2.269	0.3096	Yes
100	XRCC4	1930	2.266	0.3122	Yes
101	KLHL7	1938	2.261	0.3147	Yes
102	SMC2	1949	2.254	0.3169	Yes
103	CBX1	1950	2.254	0.3198	Yes
104	SNUPN	1954	2.253	0.3224	Yes
105	KPNA1	1965	2.248	0.3247	Yes
106	EMG1	1984	2.233	0.3265	Yes
107	HDAC9	2082	2.169	0.3239	Yes
108	RAD51	2089	2.166	0.3262	Yes
109	TOP2A	2126	2.130	0.3269	Yes
110	CIRH1A	2149	2.117	0.3284	Yes
111	SF3B2	2151	2.115	0.3310	Yes
112	POLQ	2153	2.114	0.3335	Yes
113	LRPPRC	2182	2.094	0.3346	Yes
114	NCL	2190	2.089	0.3368	Yes
115	PURB	2200	2.082	0.3390	Yes
116	SNRPD3	2249	2.054	0.3389	Yes
117	RANBP5	2325	1.997	0.3373	Yes
118	MRE11A	2327	1.995	0.3397	Yes
119	NBN	2351	1.977	0.3409	Yes
120	WRN	2354	1.975	0.3433	Yes
121	RBBP5	2430	1.935	0.3416	Yes
122	RPS7	2468	1.914	0.3419	Yes
123	SNW1	2607	1.840	0.3366	Yes
124	SNRPG	2614	1.836	0.3386	Yes
125	NARG1	2618	1.829	0.3407	Yes
126	MSH3	2634	1.816	0.3422	Yes
127	ASH2L	2681	1.786	0.3419	Yes
128	KRR1	2682	1.786	0.3441	Yes
129	RPP30	2693	1.780	0.3458	Yes
130	UBTF	2702	1.772	0.3476	Yes
131	TERF2IP	2705	1.770	0.3497	Yes
132	POLI	2706	1.769	0.3519	Yes
133	ANAPC5	2737	1.752	0.3524	Yes
134	NUP133	2750	1.746	0.3539	Yes
135	BNIP3L	2762	1.736	0.3555	Yes
136	ASCC3L1	2774	1.729	0.3571	Yes
137	XPO7	2781	1.727	0.3589	Yes
138	COPS2	2808	1.712	0.3596	Yes
139	EZH2	2839	1.693	0.3601	Yes
140	TAF9	2874	1.678	0.3603	Yes
141	GTF2H4	2875	1.677	0.3624	Yes
142	ATXN3	2901	1.664	0.3631	Yes
143	TCOF1	2912	1.660	0.3646	Yes
144	TOP2B	2913	1.659	0.3667	Yes
145	RPL11	2918	1.656	0.3686	Yes
146	PRPF8	2926	1.651	0.3702	Yes
147	ACTB	2998	1.615	0.3684	Yes
148	MATR3	2999	1.615	0.3704	Yes
149	CHEK1	3028	1.603	0.3708	Yes
150	HNRPH2	3134	1.551	0.3670	No
151	PTGER3	3173	1.535	0.3668	No
152	ARNTL	3228	1.512	0.3658	No
153	MRPL19	3235	1.511	0.3673	No
154	ZNF638	3236	1.511	0.3692	No
155	CPSF1	3247	1.506	0.3706	No
156	HMGB2	3330	1.469	0.3679	No
157	LIG4	3343	1.461	0.3691	No
158	SIP1	3480	1.395	0.3633	No
159	EXOSC9	3511	1.379	0.3634	No
160	CHAF1B	3593	1.348	0.3606	No
161	PHF5A	3598	1.345	0.3621	No
162	ASF1A	3617	1.333	0.3628	No
163	TRIM27	3712	1.293	0.3592	No
164	PAX8	3727	1.285	0.3601	No
165	EFTUD2	3934	1.207	0.3502	No
166	NF2	3945	1.202	0.3512	No
167	COIL	3967	1.192	0.3515	No
168	RANBP2	3982	1.188	0.3522	No
169	PPARGC1A	4010	1.174	0.3522	No
170	TTN	4018	1.171	0.3533	No
171	H2AFY	4100	1.141	0.3503	No
172	ERCC5	4106	1.140	0.3514	No
173	NOLC1	4115	1.135	0.3524	No
174	STAG3	4131	1.129	0.3530	No
175	PPARGC1B	4266	1.079	0.3470	No
176	POLA1	4315	1.064	0.3457	No
177	BRCC3	4319	1.064	0.3468	No
178	SNRPD1	4490	1.004	0.3388	No
179	DYRK1A	4492	1.003	0.3400	No
180	MED4	4512	0.995	0.3402	No
181	SAP18	4652	0.947	0.3337	No
182	LMNB1	4696	0.934	0.3325	No
183	TOPBP1	4715	0.926	0.3327	No
184	UBE2I	4730	0.920	0.3331	No
185	RPL35	4792	0.897	0.3308	No
186	BARD1	4829	0.888	0.3300	No
187	MPHOSPH1	4861	0.880	0.3294	No
188	TIPIN	4911	0.863	0.3277	No
189	NPM1	4948	0.854	0.3268	No
190	DDX11	4955	0.849	0.3276	No
191	SMARCA4	5040	0.822	0.3240	No
192	RPP38	5138	0.791	0.3196	No
193	NR6A1	5158	0.786	0.3196	No
194	POLR1E	5168	0.784	0.3200	No
195	MCM3	5174	0.780	0.3207	No
196	SNRPF	5290	0.748	0.3154	No
197	TIMM50	5329	0.734	0.3142	No
198	HNRPF	5494	0.681	0.3060	No
199	MCM7	5501	0.680	0.3066	No
200	GUCY2F	5644	0.634	0.2995	No
201	GTF3C3	5688	0.622	0.2980	No
202	SNRPB2	5788	0.598	0.2933	No
203	MSH2	5904	0.567	0.2877	No
204	GTF2F1	5987	0.540	0.2838	No
205	RAE1	6037	0.526	0.2818	No
206	SNRPN	6039	0.526	0.2824	No
207	FOXF2	6118	0.503	0.2787	No
208	SMARCD2	6149	0.494	0.2777	No
209	PHF12	6151	0.493	0.2783	No
210	JUN	6199	0.481	0.2763	No
211	WTAP	6211	0.476	0.2763	No
212	CHAF1A	6354	0.438	0.2690	No
213	ZNF148	6459	0.410	0.2638	No
214	RPL3	6524	0.393	0.2608	No
215	CLOCK	6547	0.389	0.2601	No
216	SNRPA1	6628	0.365	0.2561	No
217	NOLA2	6658	0.356	0.2550	No
218	PAM	6677	0.351	0.2544	No
219	TUBG1	6693	0.347	0.2540	No
220	RUVBL1	6849	0.306	0.2459	No
221	NUDT21	6899	0.291	0.2436	No
222	NOL1	6915	0.286	0.2431	No
223	SREBF1	6924	0.285	0.2430	No
224	PHB	7029	0.255	0.2376	No
225	FOXC1	7135	0.230	0.2321	No
226	GEMIN6	7152	0.225	0.2315	No
227	POLR2B	7175	0.219	0.2306	No
228	XPO1	7218	0.210	0.2286	No
229	NAP1L3	7472	0.147	0.2148	No
230	CENPF	7555	0.129	0.2105	No
231	NOD2	7603	0.116	0.2080	No
232	CPSF3	7663	0.099	0.2049	No
233	SMUG1	7848	0.056	0.1949	No
234	DHX8	7923	0.034	0.1909	No
235	DMC1	8026	0.008	0.1853	No
236	BRCA1	8063	-0.001	0.1833	No
237	SF3B3	8081	-0.005	0.1824	No
238	RCC1	8282	-0.055	0.1714	No
239	ZBTB16	8301	-0.059	0.1705	No
240	NUP153	8465	-0.107	0.1617	No
241	BCAS2	8479	-0.110	0.1611	No
242	BNIP3	8499	-0.115	0.1602	No
243	NPAS2	8540	-0.125	0.1582	No
244	MPHOSPH10	8568	-0.131	0.1569	No
245	SP100	8589	-0.136	0.1559	No
246	PRM2	8611	-0.142	0.1549	No
247	NPM2	8787	-0.184	0.1456	No
248	SRP68	8813	-0.190	0.1444	No
249	TERT	8876	-0.205	0.1413	No
250	SMARCA5	8915	-0.212	0.1394	No
251	PHF21A	9066	-0.250	0.1315	No
252	RTCD1	9090	-0.256	0.1306	No
253	DDX56	9284	-0.296	0.1203	No
254	SLC29A2	9374	-0.314	0.1158	No
255	APTX	9403	-0.320	0.1147	No
256	SF3B4	9442	-0.328	0.1130	No
257	NDUFA13	9503	-0.342	0.1101	No
258	NFYC	9650	-0.379	0.1026	No
259	HIPK2	9675	-0.385	0.1018	No
260	RUVBL2	9685	-0.387	0.1017	No
261	HDAC10	9688	-0.387	0.1021	No
262	TAF10	9702	-0.391	0.1019	No
263	HCLS1	9707	-0.392	0.1022	No
264	ASNA1	9829	-0.422	0.0960	No
265	LMO4	9851	-0.427	0.0954	No
266	NUP62	9876	-0.433	0.0946	No
267	PURA	9948	-0.451	0.0913	No
268	HDAC8	9967	-0.454	0.0909	No
269	DDX24	9969	-0.456	0.0914	No
270	ATXN1	9983	-0.460	0.0913	No
271	PTBP1	10011	-0.467	0.0904	No
272	TAF4	10103	-0.489	0.0860	No
273	GRINL1A	10221	-0.513	0.0802	No
274	TEP1	11017	-0.685	0.0373	No
275	RRP9	11019	-0.686	0.0381	No
276	GIT2	11083	-0.699	0.0356	No
277	NEK11	11087	-0.700	0.0363	No
278	FIGLA	11098	-0.702	0.0366	No
279	DNAJB9	11207	-0.726	0.0316	No
280	ERCC3	11223	-0.729	0.0317	No
281	CBX5	11423	-0.773	0.0217	No
282	SNAPC4	11447	-0.779	0.0214	No
283	GTF3C1	11457	-0.781	0.0219	No
284	SPTBN4	11538	-0.795	0.0185	No
285	POLR2J	11616	-0.811	0.0153	No
286	THRAP3	11703	-0.827	0.0116	No
287	ELP3	11780	-0.843	0.0084	No
288	TDG	11796	-0.846	0.0087	No
289	PPIH	11858	-0.860	0.0064	No
290	POLR3C	11975	-0.882	0.0011	No
291	TAF6L	11986	-0.884	0.0017	No
292	RGS12	12012	-0.890	0.0014	No
293	HOXC10	12138	-0.914	-0.0043	No
294	FUSIP1	12272	-0.942	-0.0104	No
295	EXOSC10	12310	-0.950	-0.0113	No
296	IPO7	12394	-0.968	-0.0146	No
297	XRN2	12428	-0.974	-0.0152	No
298	PSEN1	12666	-1.025	-0.0270	No
299	TXNL4A	12726	-1.037	-0.0289	No
300	REPIN1	12737	-1.039	-0.0282	No
301	U2AF1	12759	-1.043	-0.0280	No
302	RELA	12928	-1.079	-0.0359	No
303	PTF1A	12988	-1.090	-0.0378	No
304	NOL4	13023	-1.096	-0.0383	No
305	NAP1L2	13043	-1.101	-0.0380	No
306	NXT1	13068	-1.106	-0.0379	No
307	ARID4A	13208	-1.137	-0.0441	No
308	FMR1	13235	-1.144	-0.0441	No
309	SCRN1	13354	-1.170	-0.0491	No
310	EDF1	13356	-1.170	-0.0477	No
311	LRCH4	13440	-1.193	-0.0508	No
312	NUTF2	13484	-1.203	-0.0517	No
313	NOL3	13516	-1.211	-0.0518	No
314	PITX2	13518	-1.211	-0.0504	No
315	ELL2	13658	-1.245	-0.0565	No
316	ATRX	13665	-1.248	-0.0552	No
317	DULLARD	13708	-1.258	-0.0560	No
318	GEMIN4	13869	-1.298	-0.0631	No
319	POLR2A	13991	-1.325	-0.0681	No
320	NCR1	14147	-1.364	-0.0750	No
321	SNRPD2	14236	-1.387	-0.0781	No
322	RPP40	14371	-1.424	-0.0836	No
323	CDK9	14383	-1.427	-0.0825	No
324	NUFIP1	14401	-1.433	-0.0816	No
325	RALY	14419	-1.435	-0.0807	No
326	POP7	14427	-1.437	-0.0793	No
327	NLRP5	14482	-1.451	-0.0805	No
328	SF3A1	14488	-1.452	-0.0789	No
329	RPL36	14493	-1.453	-0.0773	No
330	NOLA3	14559	-1.472	-0.0791	No
331	ELP4	14646	-1.494	-0.0819	No
332	POP1	14674	-1.502	-0.0815	No
333	NPC1	14722	-1.512	-0.0822	No
334	RANGAP1	14764	-1.524	-0.0826	No
335	U2AF2	14779	-1.528	-0.0814	No
336	IFI16	14844	-1.546	-0.0830	No
337	GCM1	14850	-1.548	-0.0814	No
338	WDR4	14889	-1.559	-0.0815	No
339	EPAS1	15018	-1.596	-0.0865	No
340	GEMIN5	15136	-1.634	-0.0909	No
341	SNRP70	15171	-1.645	-0.0907	No
342	RPA2	15172	-1.646	-0.0887	No
343	OGG1	15263	-1.673	-0.0915	No
344	FOXE3	15276	-1.676	-0.0901	No
345	CDC26	15355	-1.701	-0.0923	No
346	ERCC4	15385	-1.711	-0.0917	No
347	ELF4	15483	-1.739	-0.0949	No
348	SMC3	15525	-1.752	-0.0949	No
349	GNAZ	15549	-1.757	-0.0940	No
350	NUP98	15574	-1.767	-0.0931	No
351	DNMT3A	15769	-1.842	-0.1015	No
352	TAF7	15773	-1.843	-0.0993	No
353	MYBBP1A	15780	-1.847	-0.0974	No
354	SURF6	15797	-1.855	-0.0959	No
355	TIMELESS	15839	-1.874	-0.0958	No
356	NRM	15880	-1.890	-0.0957	No
357	POLR2E	16023	-1.951	-0.1010	No
358	ISG20	16047	-1.962	-0.0998	No
359	POLR3H	16119	-1.990	-0.1012	No
360	SMARCD3	16182	-2.020	-0.1021	No
361	PDCD7	16242	-2.042	-0.1028	No
362	SNRPB	16251	-2.043	-0.1007	No
363	MEN1	16285	-2.058	-0.0999	No
364	HDAC11	16286	-2.059	-0.0974	No
365	HIF1A	16331	-2.081	-0.0972	No
366	TFIP11	16390	-2.114	-0.0977	No
367	BNIP1	16418	-2.124	-0.0966	No
368	RPS19	16512	-2.165	-0.0990	No
369	RAD50	16540	-2.181	-0.0977	No
370	RBM14	16566	-2.195	-0.0963	No
371	NKX2-5	16567	-2.195	-0.0936	No
372	RBPJ	16574	-2.202	-0.0912	No
373	DEDD	16644	-2.234	-0.0922	No
374	MPG	16648	-2.234	-0.0895	No
375	MCRS1	16656	-2.238	-0.0871	No
376	PPP1R9B	16665	-2.244	-0.0848	No
377	PMF1	16695	-2.261	-0.0835	No
378	GTF3C5	16705	-2.265	-0.0812	No
379	EXOSC3	16736	-2.283	-0.0800	No
380	SNRPA	16757	-2.297	-0.0782	No
381	CHMP1A	16821	-2.334	-0.0788	No
382	HTATIP2	16825	-2.335	-0.0760	No
383	FGF18	16862	-2.359	-0.0750	No
384	ANAPC11	16953	-2.417	-0.0770	No
385	HDAC6	16985	-2.439	-0.0756	No
386	TP53	16989	-2.442	-0.0727	No
387	ERCC2	17101	-2.512	-0.0757	No
388	ERCC8	17130	-2.534	-0.0741	No
389	TAF12	17283	-2.646	-0.0791	No
390	SUV39H1	17325	-2.683	-0.0780	No
391	HES6	17357	-2.707	-0.0763	No
392	AAAS	17397	-2.732	-0.0750	No
393	LSM4	17423	-2.755	-0.0730	No
394	ZNF346	17436	-2.763	-0.0702	No
395	NOL6	17465	-2.787	-0.0682	No
396	HDAC7A	17520	-2.834	-0.0677	No
397	DDX54	17531	-2.842	-0.0647	No
398	CIB1	17577	-2.885	-0.0635	No
399	EIF5A	17584	-2.891	-0.0602	No
400	GLIS2	17651	-2.971	-0.0601	No
401	SMARCD1	17673	-2.995	-0.0576	No
402	DDX19B	17721	-3.043	-0.0563	No
403	KLHDC3	17737	-3.058	-0.0533	No
404	TAF6	17808	-3.141	-0.0533	No
405	FZR1	17832	-3.162	-0.0506	No
406	HDAC3	17898	-3.251	-0.0501	No
407	DHCR7	17944	-3.326	-0.0484	No
408	HTATIP	17948	-3.330	-0.0444	No
409	NAP1L1	17970	-3.356	-0.0413	No
410	EMD	17986	-3.386	-0.0379	No
411	BCL2	18040	-3.485	-0.0365	No
412	PML	18063	-3.520	-0.0333	No
413	HRB	18138	-3.665	-0.0328	No
414	HDAC5	18140	-3.673	-0.0282	No
415	GEMIN7	18142	-3.676	-0.0237	No
416	ABL1	18257	-3.934	-0.0250	No
417	SF3A2	18268	-3.973	-0.0206	No
418	DEDD2	18378	-4.355	-0.0212	No
419	ERCC1	18408	-4.452	-0.0172	No
420	HMGA1	18432	-4.595	-0.0127	No
421	PSEN2	18558	-5.563	-0.0126	No
422	BRE	18586	-6.230	-0.0063	No
423	SMARCB1	18587	-6.337	0.0016	No