Details for gene set V$NERF

Table: GSEA Results Summary

Dataset	set03_absentNotch_versus_truncNotch
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_neg
GeneSet	V$NERF_Q2
Enrichment Score (ES)	-0.28661793
Normalized Enrichment Score (NES)	-1.3664609
Nominal p-value	0.020992367
FDR q-value	0.56057245
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	FREQ	8	6.962	0.0234	No
2	BCOR	252	4.333	0.0250	No
3	UCHL5	451	3.866	0.0275	No
4	LRRFIP2	495	3.788	0.0382	No
5	RANBP1	654	3.537	0.0417	No
6	TOPORS	741	3.404	0.0487	No
7	MYOHD1	747	3.394	0.0600	No
8	EXTL2	852	3.247	0.0655	No
9	KLF13	885	3.203	0.0747	No
10	NFATC3	901	3.185	0.0848	No
11	FCGR2B	1003	3.081	0.0899	No
12	CALM2	1022	3.060	0.0994	No
13	BTBD12	1287	2.800	0.0946	No
14	DPP8	1367	2.727	0.0997	No
15	SECISBP2	1391	2.704	0.1077	No
16	HN1	1401	2.697	0.1164	No
17	STARD13	1713	2.426	0.1079	No
18	TCF12	1786	2.371	0.1121	No
19	VCL	1889	2.291	0.1144	No
20	NLK	1937	2.261	0.1196	No
21	ELOVL5	2060	2.181	0.1204	No
22	CAMK1D	2124	2.132	0.1243	No
23	EBAG9	2239	2.059	0.1252	No
24	PCDH7	2338	1.986	0.1266	No
25	RASA1	2386	1.958	0.1308	No
26	MCTS1	2673	1.792	0.1214	No
27	UBTF	2702	1.772	0.1260	No
28	ELK3	2902	1.664	0.1209	No
29	GOLGA7	2996	1.616	0.1214	No
30	TFRC	3112	1.563	0.1205	No
31	MAP2K6	3157	1.542	0.1234	No
32	RBBP7	3388	1.441	0.1158	No
33	CDCA3	3409	1.433	0.1197	No
34	ACTR3	3452	1.406	0.1222	No
35	LOXL3	3457	1.405	0.1268	No
36	ATP1A1	3594	1.348	0.1240	No
37	TPP2	3750	1.276	0.1200	No
38	ATP5H	3887	1.220	0.1168	No
39	ZNF23	4244	1.091	0.1012	No
40	ERG	4299	1.070	0.1019	No
41	FKBP10	4352	1.049	0.1027	No
42	IKBKB	4420	1.028	0.1026	No
43	STARD8	4500	1.000	0.1017	No
44	SLC30A7	4757	0.912	0.0910	No
45	CHD2	4771	0.907	0.0934	No
46	GPR132	4875	0.876	0.0908	No
47	DIABLO	5229	0.766	0.0743	No
48	GMFB	5781	0.599	0.0465	No
49	PAK3	5966	0.547	0.0384	No
50	SRPR	6009	0.533	0.0379	No
51	SDCCAG8	6136	0.497	0.0328	No
52	UBE2L3	6314	0.447	0.0247	No
53	CAPZA1	6371	0.433	0.0232	No
54	PIK3CG	6533	0.391	0.0158	No
55	PEX11B	6666	0.354	0.0098	No
56	PLCB2	6673	0.352	0.0107	No
57	HOXB9	6870	0.299	0.0011	No
58	SLITRK6	6962	0.276	-0.0029	No
59	ATOH8	7014	0.260	-0.0047	No
60	LYL1	7018	0.260	-0.0040	No
61	PTPRN	7428	0.160	-0.0256	No
62	HYAL2	7574	0.123	-0.0331	No
63	EFNA1	7677	0.096	-0.0383	No
64	SLCO2B1	7718	0.086	-0.0401	No
65	PIGW	7907	0.038	-0.0502	No
66	SHC3	8287	-0.056	-0.0706	No
67	HMGN2	8310	-0.061	-0.0715	No
68	OLFML2A	8385	-0.083	-0.0753	No
69	KCND1	8421	-0.092	-0.0769	No
70	HIC1	8933	-0.216	-0.1038	No
71	SNCG	9188	-0.277	-0.1166	No
72	JAG1	9243	-0.288	-0.1186	No
73	LYN	9318	-0.303	-0.1215	No
74	TUSC3	9367	-0.312	-0.1231	No
75	CD79A	9400	-0.319	-0.1237	No
76	SLC4A2	9574	-0.359	-0.1319	No
77	HCLS1	9707	-0.392	-0.1377	No
78	LAT	9745	-0.400	-0.1383	No
79	CDK5	9762	-0.405	-0.1378	No
80	POU4F3	9882	-0.434	-0.1428	No
81	ZHX2	10220	-0.512	-0.1593	No
82	TRO	10307	-0.532	-0.1621	No
83	NDUFS2	10380	-0.549	-0.1641	No
84	CAP1	10497	-0.574	-0.1685	No
85	ST7L	10564	-0.589	-0.1700	No
86	CPNE8	10724	-0.623	-0.1765	No
87	BMP4	10728	-0.625	-0.1745	No
88	FOSL1	10910	-0.666	-0.1821	No
89	HOXC4	11153	-0.714	-0.1927	No
90	MPL	11178	-0.721	-0.1916	No
91	DDIT3	11304	-0.746	-0.1958	No
92	CNNM1	11387	-0.766	-0.1976	No
93	RHOV	11465	-0.781	-0.1991	No
94	ZFPM1	11499	-0.786	-0.1982	No
95	NPY	11532	-0.793	-0.1972	No
96	MID1	11775	-0.841	-0.2075	No
97	SH3TC1	11781	-0.843	-0.2049	No
98	SEMA4C	11980	-0.883	-0.2126	No
99	PAX6	12220	-0.930	-0.2224	No
100	ARHGAP8	12353	-0.960	-0.2262	No
101	ROBO4	12699	-1.033	-0.2414	No
102	FCER1G	12757	-1.043	-0.2409	No
103	FLT1	12764	-1.044	-0.2377	No
104	BAZ2A	12834	-1.058	-0.2378	No
105	UQCRH	12903	-1.072	-0.2378	No
106	POU6F2	12962	-1.086	-0.2372	No
107	TMEM4	12967	-1.086	-0.2337	No
108	GRM3	13427	-1.190	-0.2545	No
109	FXYD5	13437	-1.192	-0.2509	No
110	PITX2	13518	-1.211	-0.2511	No
111	ADAMTS4	13657	-1.245	-0.2544	No
112	RPS3	13739	-1.264	-0.2544	No
113	CD79B	13826	-1.290	-0.2547	No
114	NFIA	14031	-1.334	-0.2612	No
115	LST1	14141	-1.362	-0.2624	No
116	FGFR2	14249	-1.390	-0.2635	No
117	ITPKB	14291	-1.403	-0.2609	No
118	CLIC1	14494	-1.453	-0.2669	No
119	STAT5B	14749	-1.521	-0.2754	No
120	FURIN	14909	-1.566	-0.2787	No
121	LSAMP	14941	-1.576	-0.2750	No
122	MMRN2	14970	-1.583	-0.2711	No
123	LYPLA2	14991	-1.589	-0.2667	No
124	NTRK3	15169	-1.644	-0.2707	No
125	DPP3	15232	-1.664	-0.2684	No
126	GGTL3	15306	-1.688	-0.2665	No
127	TGIF2	15520	-1.750	-0.2721	No
128	TENC1	15789	-1.851	-0.2803	Yes
129	SALL1	15849	-1.878	-0.2771	Yes
130	CENTD2	15868	-1.887	-0.2716	Yes
131	JUNB	16036	-1.958	-0.2739	Yes
132	CNTNAP1	16052	-1.964	-0.2680	Yes
133	FBS1	16224	-2.033	-0.2703	Yes
134	PEX16	16273	-2.053	-0.2659	Yes
135	MDFI	16507	-2.161	-0.2711	Yes
136	SPRED2	16576	-2.203	-0.2673	Yes
137	PPP1R9B	16665	-2.244	-0.2644	Yes
138	EGR3	16768	-2.302	-0.2620	Yes
139	FBXO36	17031	-2.468	-0.2678	Yes
140	ARHGDIB	17066	-2.488	-0.2611	Yes
141	C1QTNF6	17224	-2.604	-0.2607	Yes
142	TWIST1	17225	-2.604	-0.2518	Yes
143	TLN1	17330	-2.687	-0.2483	Yes
144	CREB3	17335	-2.693	-0.2393	Yes
145	NRXN3	17364	-2.712	-0.2315	Yes
146	ITPR3	17398	-2.734	-0.2239	Yes
147	TRAPPC3	17571	-2.883	-0.2234	Yes
148	DEF6	17589	-2.895	-0.2144	Yes
149	ARRB2	17720	-3.043	-0.2111	Yes
150	STAT5A	17862	-3.208	-0.2077	Yes
151	PTPN6	17890	-3.242	-0.1981	Yes
152	RPS6KA4	17922	-3.288	-0.1885	Yes
153	MAPK3	18055	-3.505	-0.1837	Yes
154	FGR	18139	-3.667	-0.1756	Yes
155	USP5	18153	-3.687	-0.1637	Yes
156	CORO1A	18156	-3.694	-0.1512	Yes
157	SH2D2A	18203	-3.776	-0.1408	Yes
158	ROM1	18302	-4.073	-0.1322	Yes
159	AGPAT1	18310	-4.100	-0.1185	Yes
160	DOK1	18332	-4.174	-0.1054	Yes
161	MAP4K1	18362	-4.300	-0.0922	Yes
162	LANCL1	18405	-4.440	-0.0793	Yes
163	HMGA1	18432	-4.595	-0.0650	Yes
164	RASAL1	18485	-4.856	-0.0512	Yes
165	POLD4	18494	-4.910	-0.0349	Yes
166	HTF9C	18515	-5.047	-0.0187	Yes
167	RGS3	18604	-7.042	0.0007	Yes