Details for gene set V$GFI1

Table: GSEA Results Summary

Dataset	set03_absentNotch_versus_truncNotch
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_neg
GeneSet	V$GFI1_01
Enrichment Score (ES)	-0.27932712
Normalized Enrichment Score (NES)	-1.3596617
Nominal p-value	0.01764706
FDR q-value	0.55171466
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	BCL6	225	4.442	0.0039	No
2	SLC4A7	408	3.959	0.0084	No
3	TLK1	510	3.763	0.0165	No
4	BRD2	782	3.336	0.0139	No
5	ITGA10	789	3.326	0.0256	No
6	MBNL1	795	3.320	0.0374	No
7	SFRS2	836	3.269	0.0471	No
8	POLH	839	3.265	0.0588	No
9	HBP1	926	3.155	0.0656	No
10	NCAM1	1286	2.800	0.0562	No
11	HSD11B1	1431	2.668	0.0581	No
12	YWHAE	1571	2.534	0.0597	No
13	TOP1	1664	2.462	0.0636	No
14	TCF12	1786	2.371	0.0657	No
15	STMN1	1820	2.349	0.0724	No
16	PDC	1839	2.328	0.0799	No
17	ZIC3	2100	2.160	0.0736	No
18	SOX4	2131	2.128	0.0797	No
19	DNAJB4	2257	2.049	0.0803	No
20	MYH10	2624	1.822	0.0670	No
21	MCTS1	2673	1.792	0.0709	No
22	GPR20	2754	1.740	0.0729	No
23	CNKSR1	2904	1.664	0.0708	No
24	TMPRSS2	2936	1.646	0.0751	No
25	ATF2	3062	1.588	0.0741	No
26	CDH13	3180	1.530	0.0733	No
27	PRIMA1	3310	1.475	0.0716	No
28	TRIM23	3542	1.369	0.0641	No
29	PDE4D	3575	1.357	0.0672	No
30	ELMO3	3585	1.352	0.0717	No
31	MAP4K3	3592	1.348	0.0762	No
32	TCF4	3652	1.316	0.0778	No
33	DSCR1L1	3722	1.287	0.0787	No
34	ICAM5	3724	1.286	0.0833	No
35	SLC25A18	3770	1.269	0.0855	No
36	LUZP1	3776	1.268	0.0898	No
37	TPBG	3804	1.254	0.0929	No
38	PPARGC1A	4010	1.174	0.0860	No
39	MYO1C	4084	1.147	0.0862	No
40	TFB1M	4215	1.102	0.0831	No
41	PPARGC1B	4266	1.079	0.0843	No
42	BAI3	4396	1.034	0.0811	No
43	DEPDC2	4577	0.971	0.0748	No
44	PANK1	4602	0.962	0.0770	No
45	LAMA3	4741	0.917	0.0728	No
46	NGEF	4893	0.869	0.0678	No
47	TFEC	4951	0.852	0.0678	No
48	PTEN	5008	0.829	0.0678	No
49	ABCF2	5283	0.749	0.0556	No
50	XPO5	5323	0.737	0.0562	No
51	SPAG7	5384	0.716	0.0555	No
52	CSAD	5726	0.614	0.0392	No
53	CGN	5733	0.611	0.0411	No
54	PREP	5855	0.581	0.0366	No
55	CRYZL1	5861	0.578	0.0385	No
56	SH3BGRL2	5863	0.577	0.0405	No
57	BNC2	5900	0.569	0.0406	No
58	HOXA7	5993	0.539	0.0376	No
59	AVP	6042	0.525	0.0369	No
60	KLF15	6201	0.480	0.0300	No
61	IRX3	6321	0.445	0.0252	No
62	MEF2C	6474	0.406	0.0184	No
63	PEA15	6641	0.360	0.0107	No
64	OTP	6703	0.345	0.0086	No
65	PBX1	6757	0.333	0.0070	No
66	RARB	6819	0.316	0.0048	No
67	TRDN	6878	0.296	0.0027	No
68	GAS2	6969	0.273	-0.0012	No
69	MEIS1	7214	0.211	-0.0136	No
70	SGK2	7334	0.184	-0.0194	No
71	HOXD11	7379	0.172	-0.0212	No
72	TLR1	7547	0.129	-0.0298	No
73	CNTN6	7576	0.123	-0.0309	No
74	JPH4	7647	0.104	-0.0343	No
75	ZIC4	7739	0.081	-0.0389	No
76	SERTAD4	7784	0.073	-0.0410	No
77	EVA1	7882	0.046	-0.0461	No
78	PROCR	7962	0.023	-0.0503	No
79	PHF8	8119	-0.012	-0.0588	No
80	ZFPM2	8298	-0.059	-0.0682	No
81	GRPR	8438	-0.097	-0.0754	No
82	CACNG3	8555	-0.128	-0.0812	No
83	MSR1	8572	-0.132	-0.0816	No
84	POU3F1	8587	-0.135	-0.0819	No
85	BPGM	8748	-0.173	-0.0900	No
86	CDH6	8806	-0.188	-0.0924	No
87	RKHD1	8869	-0.203	-0.0950	No
88	NKX2-8	8945	-0.219	-0.0983	No
89	EDN1	9106	-0.260	-0.1060	No
90	HOXD10	9116	-0.262	-0.1056	No
91	ITSN1	9186	-0.277	-0.1083	No
92	GABARAP	9440	-0.328	-0.1208	No
93	MAP2K7	9488	-0.337	-0.1222	No
94	CTLA4	9669	-0.384	-0.1306	No
95	DSPP	9732	-0.398	-0.1325	No
96	PI15	9822	-0.421	-0.1358	No
97	SREBF2	9854	-0.427	-0.1359	No
98	PURA	9948	-0.451	-0.1393	No
99	HOXA6	9984	-0.460	-0.1396	No
100	TBR1	10086	-0.483	-0.1433	No
101	HNRPA0	10123	-0.494	-0.1435	No
102	GADD45A	10538	-0.584	-0.1638	No
103	C1QTNF7	10544	-0.585	-0.1620	No
104	GREM1	10662	-0.612	-0.1661	No
105	SLC26A3	10680	-0.615	-0.1648	No
106	BMP4	10728	-0.625	-0.1651	No
107	HOXA3	10787	-0.638	-0.1659	No
108	CDON	11050	-0.692	-0.1776	No
109	HOXC4	11153	-0.714	-0.1806	No
110	DDR2	11184	-0.722	-0.1796	No
111	CREM	11594	-0.807	-0.1988	No
112	IRF2BP1	11837	-0.855	-0.2089	No
113	SOX15	11849	-0.857	-0.2064	No
114	ZIC1	11927	-0.874	-0.2074	No
115	SOX9	12020	-0.892	-0.2091	No
116	RHOA	12134	-0.912	-0.2120	No
117	DSG3	12168	-0.920	-0.2104	No
118	CHRM1	12174	-0.921	-0.2074	No
119	MTMR4	12380	-0.967	-0.2150	No
120	BCL9	12974	-1.087	-0.2432	No
121	JMJD1C	13139	-1.120	-0.2481	No
122	CCR7	13626	-1.238	-0.2700	No
123	TCF1	13671	-1.250	-0.2678	No
124	PCDH8	13884	-1.302	-0.2746	Yes
125	BDNF	13934	-1.313	-0.2725	Yes
126	HOXA9	14019	-1.331	-0.2722	Yes
127	NFIA	14031	-1.334	-0.2680	Yes
128	PHYHIP	14081	-1.349	-0.2658	Yes
129	IL16	14094	-1.352	-0.2615	Yes
130	EXOC7	14199	-1.377	-0.2622	Yes
131	DCX	14465	-1.447	-0.2713	Yes
132	ETS1	14475	-1.449	-0.2666	Yes
133	MAP3K3	14527	-1.464	-0.2640	Yes
134	FOXP2	14704	-1.508	-0.2681	Yes
135	PLCD4	14760	-1.523	-0.2656	Yes
136	GFRA3	14807	-1.534	-0.2625	Yes
137	SOX5	14917	-1.569	-0.2627	Yes
138	SOSTDC1	14936	-1.575	-0.2580	Yes
139	CPEB3	15022	-1.598	-0.2568	Yes
140	RKHD3	15178	-1.647	-0.2593	Yes
141	HOXB6	15192	-1.651	-0.2540	Yes
142	TRAF4	15204	-1.659	-0.2486	Yes
143	GPRC5D	15319	-1.692	-0.2486	Yes
144	ARHGEF2	15383	-1.710	-0.2459	Yes
145	PHACTR3	15437	-1.727	-0.2425	Yes
146	NR2F2	15439	-1.727	-0.2363	Yes
147	NEXN	15472	-1.736	-0.2317	Yes
148	EBF2	15591	-1.772	-0.2317	Yes
149	RAB6B	15618	-1.780	-0.2266	Yes
150	RORA	15626	-1.783	-0.2206	Yes
151	KLF12	15631	-1.785	-0.2143	Yes
152	GRK6	15662	-1.797	-0.2094	Yes
153	DPF3	15754	-1.836	-0.2077	Yes
154	CDX2	15756	-1.837	-0.2011	Yes
155	HIST1H1T	15777	-1.845	-0.1955	Yes
156	ASB4	15904	-1.899	-0.1955	Yes
157	ICAM4	15923	-1.906	-0.1895	Yes
158	HIST1H1E	15986	-1.932	-0.1859	Yes
159	PPP2R2A	16113	-1.987	-0.1855	Yes
160	HOXC8	16196	-2.025	-0.1826	Yes
161	CALN1	16202	-2.027	-0.1756	Yes
162	MAP4K2	16259	-2.046	-0.1712	Yes
163	WDR23	16378	-2.106	-0.1700	Yes
164	ATP5G2	16435	-2.128	-0.1653	Yes
165	BTG1	16454	-2.135	-0.1585	Yes
166	ELAVL4	16496	-2.156	-0.1529	Yes
167	TSGA10	16523	-2.169	-0.1465	Yes
168	ADD3	16532	-2.177	-0.1390	Yes
169	HOXB8	16694	-2.261	-0.1396	Yes
170	ANGPT1	16713	-2.268	-0.1323	Yes
171	CREB5	16764	-2.299	-0.1267	Yes
172	HIVEP3	16770	-2.305	-0.1186	Yes
173	HOXB3	16779	-2.314	-0.1107	Yes
174	MRGPRF	16792	-2.321	-0.1029	Yes
175	HOXA10	16854	-2.351	-0.0977	Yes
176	SP8	16952	-2.417	-0.0942	Yes
177	CLMN	17029	-2.467	-0.0894	Yes
178	RPS6KB1	17050	-2.477	-0.0815	Yes
179	GPR17	17111	-2.517	-0.0756	Yes
180	CACNB2	17116	-2.522	-0.0667	Yes
181	CAMK2D	17135	-2.535	-0.0585	Yes
182	NRXN3	17364	-2.712	-0.0610	Yes
183	PTHLH	17380	-2.723	-0.0520	Yes
184	PRKAG1	17424	-2.756	-0.0443	Yes
185	PDLIM1	17523	-2.838	-0.0394	Yes
186	TCTA	17662	-2.985	-0.0360	Yes
187	BCL9L	18074	-3.539	-0.0455	Yes
188	USP5	18153	-3.687	-0.0364	Yes
189	BRUNOL4	18160	-3.697	-0.0233	Yes
190	MAP2K5	18266	-3.966	-0.0146	Yes
191	HMGA1	18432	-4.595	-0.0069	Yes
192	AGPAT4	18452	-4.657	0.0089	Yes