Details for gene set V$E2F_Q4

Table: GSEA Results Summary

Dataset	set03_absentNotch_versus_normalThy
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	V$E2F_Q4_01
Enrichment Score (ES)	0.3392102
Normalized Enrichment Score (NES)	1.469822
Nominal p-value	0.006329114
FDR q-value	0.13293214
FWER p-Value	0.924

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	BMP7	3	13.344	0.0419	Yes
2	EIF5A	26	8.461	0.0675	Yes
3	HNRPA1	80	6.737	0.0858	Yes
4	IMPDH2	260	4.782	0.0912	Yes
5	PRIM1	316	4.464	0.1023	Yes
6	SLC38A1	347	4.333	0.1144	Yes
7	PVRL1	429	4.049	0.1228	Yes
8	RPS19	455	3.961	0.1339	Yes
9	PCSK4	463	3.934	0.1460	Yes
10	ATP5G2	470	3.913	0.1580	Yes
11	ATAD2	544	3.756	0.1659	Yes
12	UNG	571	3.670	0.1760	Yes
13	NUTF2	572	3.669	0.1876	Yes
14	ABCF2	627	3.544	0.1959	Yes
15	PIK3R3	654	3.483	0.2055	Yes
16	EPHB2	726	3.367	0.2122	Yes
17	AP4M1	796	3.247	0.2187	Yes
18	MCM6	829	3.191	0.2271	Yes
19	DNAJC11	916	3.048	0.2320	Yes
20	PPP1R8	938	3.014	0.2404	Yes
21	YWHAQ	1040	2.880	0.2440	Yes
22	RFC1	1047	2.871	0.2528	Yes
23	RANBP1	1098	2.805	0.2589	Yes
24	IPO11	1136	2.751	0.2656	Yes
25	NCL	1174	2.702	0.2721	Yes
26	RAD51	1206	2.652	0.2788	Yes
27	E2F1	1260	2.582	0.2841	Yes
28	NASP	1272	2.565	0.2916	Yes
29	UXT	1302	2.546	0.2980	Yes
30	MYC	1312	2.533	0.3055	Yes
31	MCM4	1339	2.506	0.3120	Yes
32	MELK	1471	2.375	0.3124	Yes
33	NR3C2	1634	2.242	0.3107	Yes
34	E2F3	1780	2.138	0.3096	Yes
35	PPRC1	1892	2.070	0.3101	Yes
36	APRIN	1975	2.026	0.3121	Yes
37	MCM3	2001	2.009	0.3171	Yes
38	ADAMTS2	2026	1.998	0.3221	Yes
39	MCM7	2035	1.992	0.3279	Yes
40	HMGA1	2154	1.926	0.3276	Yes
41	POLA2	2218	1.890	0.3302	Yes
42	STAG1	2259	1.867	0.3339	Yes
43	RBBP4	2393	1.803	0.3324	Yes
44	NRP2	2425	1.787	0.3363	Yes
45	STMN1	2649	1.690	0.3296	Yes
46	ERG	2730	1.654	0.3305	Yes
47	TOP1	2747	1.646	0.3348	Yes
48	TNPO2	2762	1.639	0.3392	Yes
49	SFRS2	3178	1.480	0.3214	No
50	CDC25A	3235	1.463	0.3230	No
51	PHF15	3471	1.374	0.3146	No
52	PCDH7	3500	1.365	0.3174	No
53	TBX3	3544	1.353	0.3193	No
54	RNF121	3565	1.343	0.3225	No
55	PLK4	3662	1.309	0.3214	No
56	HTF9C	3683	1.304	0.3244	No
57	KPNB1	3811	1.264	0.3215	No
58	HMGN2	3884	1.241	0.3216	No
59	MAP3K13	3979	1.212	0.3203	No
60	GMNN	4463	1.085	0.2975	No
61	DLST	4566	1.062	0.2954	No
62	CDC6	4627	1.049	0.2954	No
63	CDCA7	5180	0.919	0.2684	No
64	AP1S2	5265	0.892	0.2667	No
65	HOXA9	5376	0.866	0.2635	No
66	ACBD6	5389	0.864	0.2655	No
67	FMO4	5406	0.860	0.2674	No
68	MAT2A	5468	0.847	0.2668	No
69	ASXL2	5496	0.840	0.2679	No
70	TNFRSF19L	5576	0.826	0.2663	No
71	SLC6A4	5579	0.826	0.2688	No
72	USP2	6024	0.731	0.2470	No
73	MCM2	6089	0.721	0.2458	No
74	KNTC1	6172	0.702	0.2436	No
75	PAQR4	6181	0.701	0.2454	No
76	STAG2	6458	0.642	0.2324	No
77	SFMBT1	6671	0.600	0.2229	No
78	KCND2	6680	0.598	0.2243	No
79	POLE2	6724	0.587	0.2238	No
80	PTMA	7233	0.486	0.1978	No
81	HOXC10	7254	0.481	0.1983	No
82	DCLRE1A	7344	0.463	0.1949	No
83	PODN	7546	0.426	0.1854	No
84	JPH1	7623	0.409	0.1825	No
85	SEMA5A	7751	0.386	0.1769	No
86	HNRPD	7882	0.358	0.1710	No
87	SFRS1	8028	0.331	0.1642	No
88	UFD1L	8109	0.315	0.1608	No
89	H2AFZ	8134	0.311	0.1605	No
90	CTCF	8141	0.310	0.1612	No
91	NDUFA11	8249	0.292	0.1563	No
92	DIO3	8250	0.292	0.1572	No
93	WEE1	8488	0.246	0.1451	No
94	GLRA3	8536	0.235	0.1433	No
95	BRMS1L	8570	0.228	0.1423	No
96	NEGR1	8899	0.172	0.1250	No
97	SLBP	9180	0.120	0.1102	No
98	GPRC5B	9572	0.040	0.0892	No
99	TOPBP1	9864	-0.025	0.0735	No
100	ERBB2IP	10144	-0.089	0.0587	No
101	RPS6KA5	10181	-0.097	0.0570	No
102	HIST1H1D	10232	-0.107	0.0547	No
103	UCHL1	10272	-0.118	0.0529	No
104	YBX2	10371	-0.141	0.0481	No
105	TIAM1	11381	-0.346	-0.0055	No
106	DNMT1	11467	-0.366	-0.0090	No
107	SLC16A2	11475	-0.367	-0.0082	No
108	DMD	11628	-0.401	-0.0152	No
109	IPO7	11662	-0.410	-0.0157	No
110	SUV39H1	11677	-0.413	-0.0151	No
111	ANP32E	11781	-0.435	-0.0193	No
112	FBXO5	11851	-0.451	-0.0216	No
113	EPHB1	11889	-0.462	-0.0222	No
114	FANCC	12037	-0.493	-0.0286	No
115	KCNA6	12039	-0.493	-0.0271	No
116	ETV4	12404	-0.580	-0.0450	No
117	PIK3R4	12431	-0.587	-0.0445	No
118	CASP8AP2	12448	-0.592	-0.0435	No
119	DMRT1	12944	-0.714	-0.0681	No
120	ARID4A	13045	-0.742	-0.0712	No
121	PCNA	13131	-0.768	-0.0734	No
122	LUC7L2	13251	-0.798	-0.0773	No
123	SALL1	13282	-0.805	-0.0764	No
124	ATE1	13483	-0.864	-0.0845	No
125	EZH2	13846	-0.978	-0.1010	No
126	PEG3	13972	-1.019	-0.1046	No
127	FANCG	14208	-1.104	-0.1138	No
128	PRKDC	14560	-1.225	-0.1290	No
129	ORC1L	14579	-1.228	-0.1261	No
130	POLE4	14607	-1.240	-0.1236	No
131	CDC45L	14785	-1.309	-0.1291	No
132	BAI1	14927	-1.371	-0.1324	No
133	PPM1D	14995	-1.396	-0.1316	No
134	GATA3	15141	-1.459	-0.1349	No
135	NHLRC2	15326	-1.554	-0.1399	No
136	CITED2	15581	-1.686	-0.1484	No
137	CBX5	15705	-1.755	-0.1495	No
138	ZCCHC8	15971	-1.916	-0.1578	No
139	MAP4K1	16285	-2.168	-0.1679	No
140	GPS2	16325	-2.206	-0.1631	No
141	MAZ	16484	-2.346	-0.1642	No
142	MXD3	16506	-2.368	-0.1579	No
143	CASP2	16591	-2.452	-0.1547	No
144	NCOA6	16646	-2.503	-0.1497	No
145	ERF	16970	-2.888	-0.1581	No
146	FBXL20	17123	-3.100	-0.1566	No
147	DAXX	17296	-3.389	-0.1552	No
148	KLF5	17429	-3.641	-0.1509	No
149	AXUD1	17645	-4.123	-0.1495	No
150	SYT11	17717	-4.305	-0.1398	No
151	DPYSL2	17791	-4.509	-0.1295	No
152	E2F7	18127	-5.625	-0.1299	No
153	RAB11B	18190	-5.975	-0.1144	No
154	USP52	18212	-6.083	-0.0963	No
155	DCK	18298	-6.679	-0.0799	No
156	DDB2	18301	-6.705	-0.0588	No
157	PPP1R9B	18353	-7.203	-0.0388	No
158	FBXO9	18417	-7.759	-0.0178	No
159	HRBL	18494	-9.033	0.0066	No