Details for gene set V$ARNT

Table: GSEA Results Summary

Dataset	set03_absentNotch_versus_normalThy
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_pos
GeneSet	V$ARNT_01
Enrichment Score (ES)	0.32095134
Normalized Enrichment Score (NES)	1.4042501
Nominal p-value	0.0
FDR q-value	0.18151337
FWER p-Value	0.986

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SNX8	11	10.576	0.0305	Yes
2	VARS2	25	8.561	0.0549	Yes
3	HNRPA1	80	6.737	0.0718	Yes
4	IFRD2	98	6.290	0.0894	Yes
5	NUDC	120	5.874	0.1055	Yes
6	PPAT	158	5.554	0.1198	Yes
7	SHMT1	272	4.709	0.1275	Yes
8	EIF4B	291	4.621	0.1401	Yes
9	AATF	299	4.568	0.1532	Yes
10	QTRT1	309	4.524	0.1660	Yes
11	RCL1	336	4.377	0.1774	Yes
12	SLC39A11	379	4.227	0.1876	Yes
13	NR1D1	421	4.076	0.1973	Yes
14	HSPD1	446	3.986	0.2077	Yes
15	DDX3X	560	3.707	0.2125	Yes
16	PSME3	617	3.558	0.2199	Yes
17	AKAP12	650	3.499	0.2285	Yes
18	MTCH2	692	3.421	0.2363	Yes
19	TBC1D5	700	3.410	0.2459	Yes
20	BOK	702	3.410	0.2559	Yes
21	EIF2C2	713	3.387	0.2653	Yes
22	PAICS	798	3.244	0.2703	Yes
23	EIF4E	869	3.123	0.2757	Yes
24	AMPD2	980	2.947	0.2784	Yes
25	CLN3	1012	2.914	0.2852	Yes
26	SYNCRIP	1090	2.817	0.2893	Yes
27	DSCAM	1305	2.544	0.2852	Yes
28	UBE1	1345	2.502	0.2905	Yes
29	GATA4	1361	2.484	0.2969	Yes
30	EIF3S10	1365	2.478	0.3041	Yes
31	RAB3IL1	1514	2.334	0.3029	Yes
32	PER1	1581	2.278	0.3060	Yes
33	VLDLR	1667	2.221	0.3079	Yes
34	CCAR1	1883	2.075	0.3024	Yes
35	PPRC1	1892	2.070	0.3080	Yes
36	OPRS1	2136	1.935	0.3005	Yes
37	HOXB4	2137	1.934	0.3062	Yes
38	GTF2H1	2175	1.914	0.3098	Yes
39	ETV1	2183	1.911	0.3151	Yes
40	SYT3	2348	1.827	0.3115	Yes
41	UBXD3	2601	1.714	0.3029	Yes
42	SNX2	2625	1.698	0.3067	Yes
43	STMN1	2649	1.690	0.3104	Yes
44	TEF	2673	1.680	0.3141	Yes
45	COPS7A	2711	1.662	0.3170	Yes
46	RHEBL1	2751	1.643	0.3197	Yes
47	TCERG1	2816	1.619	0.3210	Yes
48	CD164	3024	1.535	0.3142	No
49	LTBR	3198	1.474	0.3092	No
50	CHD4	3237	1.460	0.3114	No
51	CELSR3	3283	1.444	0.3132	No
52	POGK	3300	1.437	0.3166	No
53	RBBP6	3422	1.390	0.3141	No
54	COMMD3	3444	1.382	0.3170	No
55	PPP1R1B	3479	1.372	0.3192	No
56	SYT6	3793	1.270	0.3060	No
57	UBE4B	3801	1.267	0.3093	No
58	TCEAL1	3840	1.255	0.3109	No
59	HMGN2	3884	1.241	0.3123	No
60	PRPS1	4009	1.203	0.3091	No
61	ATP6V1C1	4046	1.192	0.3106	No
62	ZCCHC7	4584	1.059	0.2846	No
63	PPP1R3C	4605	1.055	0.2866	No
64	CNNM1	4845	0.994	0.2766	No
65	HIRA	5017	0.955	0.2701	No
66	NEUROG2	5145	0.925	0.2660	No
67	AP1S2	5265	0.892	0.2621	No
68	ARRDC3	5353	0.872	0.2600	No
69	ATP6V1A	5420	0.858	0.2589	No
70	RPL13A	5528	0.833	0.2556	No
71	MBNL1	5726	0.794	0.2472	No
72	NEUROD2	5814	0.776	0.2448	No
73	SNAP25	5828	0.775	0.2463	No
74	XPO1	5864	0.766	0.2467	No
75	ZBTB10	6115	0.716	0.2352	No
76	PLCG2	6130	0.712	0.2366	No
77	DNMT3A	6216	0.696	0.2340	No
78	MYST3	6354	0.664	0.2285	No
79	PICALM	6681	0.598	0.2126	No
80	NKX2-2	6855	0.561	0.2049	No
81	HOXD10	6913	0.548	0.2034	No
82	FOXD3	7106	0.510	0.1945	No
83	PCDHA10	7146	0.502	0.1938	No
84	PTMA	7233	0.486	0.1906	No
85	CRY2	7235	0.485	0.1920	No
86	PAK2	7318	0.467	0.1889	No
87	ATP6V0B	7374	0.457	0.1873	No
88	TBC1D15	7493	0.434	0.1821	No
89	JPH1	7623	0.409	0.1764	No
90	BMP2K	7685	0.399	0.1742	No
91	NR5A1	7693	0.397	0.1750	No
92	UTX	7962	0.343	0.1615	No
93	SIRT1	8112	0.315	0.1543	No
94	DNAJB9	8648	0.214	0.1259	No
95	TRPM7	8686	0.207	0.1246	No
96	ALDH6A1	8915	0.170	0.1127	No
97	NPM1	8937	0.166	0.1120	No
98	NPTX1	8966	0.160	0.1110	No
99	FOXF2	9038	0.147	0.1076	No
100	ARMET	9257	0.106	0.0961	No
101	PHC3	9488	0.059	0.0838	No
102	SLC38A5	9503	0.055	0.0832	No
103	ODC1	9549	0.045	0.0809	No
104	TIMM9	9635	0.024	0.0763	No
105	FLT3	9819	-0.016	0.0664	No
106	ABCA1	9904	-0.033	0.0620	No
107	MRPL40	9979	-0.055	0.0581	No
108	BHLHB3	9995	-0.058	0.0575	No
109	HOXA11	9997	-0.058	0.0576	No
110	ADAMTS19	10227	-0.107	0.0455	No
111	NEUROD1	10311	-0.126	0.0414	No
112	HPS3	10507	-0.169	0.0313	No
113	TESK2	10584	-0.183	0.0277	No
114	LAMP1	10676	-0.201	0.0234	No
115	BMP4	11108	-0.292	0.0009	No
116	FGF14	11201	-0.310	-0.0032	No
117	PAX6	11207	-0.311	-0.0026	No
118	TGFB2	11211	-0.313	-0.0018	No
119	CBARA1	11231	-0.316	-0.0019	No
120	SNX5	11340	-0.339	-0.0068	No
121	ARF6	11489	-0.371	-0.0137	No
122	EGLN2	11601	-0.395	-0.0186	No
123	NDUFA7	12306	-0.558	-0.0551	No
124	GATA5	12320	-0.562	-0.0542	No
125	STX6	12333	-0.565	-0.0532	No
126	ETV4	12404	-0.580	-0.0552	No
127	HOXB5	12480	-0.599	-0.0576	No
128	ELAVL3	12621	-0.632	-0.0633	No
129	SLCO1C1	12854	-0.692	-0.0738	No
130	BDNF	12902	-0.703	-0.0743	No
131	PABPN1	13066	-0.751	-0.0809	No
132	DCTN4	13091	-0.757	-0.0800	No
133	JAG1	13173	-0.779	-0.0821	No
134	RNF128	13442	-0.851	-0.0942	No
135	B3GALT6	13443	-0.851	-0.0917	No
136	MTUS1	13586	-0.900	-0.0967	No
137	HOXA1	13771	-0.955	-0.1039	No
138	RPA1	13806	-0.965	-0.1029	No
139	ILF3	14335	-1.146	-0.1282	No
140	SLC35A5	14355	-1.152	-0.1258	No
141	TAC1	14458	-1.189	-0.1278	No
142	DUSP7	14571	-1.226	-0.1303	No
143	MNT	14597	-1.236	-0.1280	No
144	NRIP3	14637	-1.250	-0.1265	No
145	DVL2	14755	-1.299	-0.1290	No
146	SCYL1	14786	-1.309	-0.1268	No
147	ESRRA	14952	-1.382	-0.1317	No
148	UBE2B	15649	-1.725	-0.1643	No
149	CBX5	15705	-1.755	-0.1622	No
150	ARMCX3	15757	-1.788	-0.1597	No
151	PDGFB	15770	-1.798	-0.1550	No
152	AKAP10	15845	-1.846	-0.1536	No
153	HOXB7	15886	-1.873	-0.1503	No
154	CSRP2BP	16008	-1.942	-0.1511	No
155	SMYD4	16061	-1.973	-0.1482	No
156	IL15RA	16258	-2.145	-0.1525	No
157	LEF1	16397	-2.266	-0.1533	No
158	ATF7IP	16541	-2.408	-0.1540	No
159	NIT1	16577	-2.439	-0.1487	No
160	COMMD8	16599	-2.457	-0.1426	No
161	UBXD1	16794	-2.674	-0.1453	No
162	RTN4	16951	-2.869	-0.1453	No
163	LZTS2	17184	-3.207	-0.1485	No
164	VPS16	17345	-3.485	-0.1469	No
165	AP1GBP1	17519	-3.860	-0.1450	No
166	MAP2K6	17544	-3.918	-0.1348	No
167	FXYD6	17853	-4.680	-0.1377	No
168	EPC1	17925	-4.900	-0.1272	No
169	BCL11B	18037	-5.272	-0.1177	No
170	KBTBD2	18041	-5.284	-0.1023	No
171	BRD2	18095	-5.480	-0.0891	No
172	RNF44	18193	-5.987	-0.0768	No
173	ZFYVE26	18439	-8.137	-0.0661	No
174	ISGF3G	18468	-8.565	-0.0425	No
175	HOXA7	18589	-17.167	0.0015	No