Details for gene set IMMUNE_SYSTEM

Table: GSEA Results Summary

Dataset	set02_ATM_minus_versus_BT_ATM_minus
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_neg
GeneSet	IMMUNE_SYSTEM_PROCESS
Enrichment Score (ES)	-0.42850927
Normalized Enrichment Score (NES)	-2.0154657
Nominal p-value	0.0
FDR q-value	0.05016665
FWER p-Value	0.122

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	IL2RA	15	4.747	0.0117	No
2	TCF12	109	3.364	0.0163	No
3	IFITM2	130	3.244	0.0238	No
4	LCK	137	3.203	0.0319	No
5	MIA3	289	2.633	0.0319	No
6	BST1	377	2.470	0.0343	No
7	MAP3K7	448	2.353	0.0372	No
8	RAG1	498	2.276	0.0409	No
9	RUNX1	523	2.244	0.0457	No
10	SKAP1	568	2.185	0.0494	No
11	CDK6	570	2.184	0.0551	No
12	SCIN	681	2.078	0.0554	No
13	ODZ1	777	1.986	0.0563	No
14	HELLS	786	1.977	0.0611	No
15	TLR4	1012	1.810	0.0554	No
16	SOD1	1102	1.758	0.0559	No
17	CTLA4	1130	1.742	0.0592	No
18	TAZ	1276	1.668	0.0569	No
19	SYK	1418	1.598	0.0546	No
20	PTPRC	1419	1.597	0.0588	No
21	ALAS2	1468	1.573	0.0607	No
22	CD164	1470	1.573	0.0647	No
23	DOCK2	1485	1.568	0.0682	No
24	GZMA	1534	1.548	0.0700	No
25	TRAF6	1621	1.510	0.0700	No
26	CD86	1658	1.497	0.0723	No
27	CD47	1791	1.442	0.0700	No
28	RGS1	1848	1.415	0.0711	No
29	PAX5	2179	1.302	0.0593	No
30	PF4	2273	1.269	0.0583	No
31	CD28	2449	1.211	0.0534	No
32	APLN	2574	1.181	0.0508	No
33	MYST3	2616	1.171	0.0519	No
34	ICOSLG	2782	1.132	0.0473	No
35	HDAC4	2975	1.089	0.0413	No
36	DPP4	3013	1.080	0.0424	No
37	GLMN	3016	1.078	0.0451	No
38	CCL25	3024	1.077	0.0476	No
39	SOCS5	3096	1.061	0.0471	No
40	TRAT1	3180	1.041	0.0460	No
41	MS4A2	3260	1.023	0.0450	No
42	RSAD2	3570	0.954	0.0333	No
43	CEBPG	3610	0.947	0.0340	No
44	CEBPB	3658	0.937	0.0342	No
45	PTAFR	3743	0.919	0.0328	No
46	CCR2	3950	0.880	0.0256	No
47	DEFB1	3976	0.876	0.0267	No
48	MALT1	4026	0.868	0.0267	No
49	CD22	4047	0.864	0.0281	No
50	NCK1	4115	0.853	0.0272	No
51	TLR7	4203	0.838	0.0254	No
52	CCL24	4313	0.820	0.0225	No
53	LAT2	4355	0.811	0.0227	No
54	CCL5	4636	0.767	0.0118	No
55	BCAR1	4667	0.762	0.0124	No
56	ETS1	4712	0.754	0.0124	No
57	CFHR1	4772	0.745	0.0116	No
58	XBP1	4839	0.734	0.0105	No
59	AKT1	4977	0.711	0.0060	No
60	CCBP2	5183	0.683	-0.0017	No
61	TM7SF4	5474	0.638	-0.0134	No
62	MAL	5502	0.634	-0.0130	No
63	CDC42	5916	0.572	-0.0305	No
64	IL4	5986	0.560	-0.0322	No
65	CHUK	6349	0.506	-0.0476	No
66	CCL27	6460	0.491	-0.0514	No
67	CLEC7A	6518	0.484	-0.0528	No
68	COLEC12	6646	0.467	-0.0574	No
69	MS4A1	6687	0.461	-0.0581	No
70	KIRREL3	6730	0.455	-0.0588	No
71	NCR1	6732	0.455	-0.0577	No
72	MR1	6788	0.447	-0.0590	No
73	CD24	6997	0.420	-0.0675	No
74	VTN	7002	0.420	-0.0666	No
75	CCR9	7347	0.373	-0.0815	No
76	NOTCH4	7465	0.358	-0.0860	No
77	BNIP3L	7546	0.347	-0.0888	No
78	CST7	7620	0.337	-0.0913	No
79	CCL4	7646	0.333	-0.0915	No
80	LAT	7660	0.331	-0.0913	No
81	IL8RB	7730	0.323	-0.0936	No
82	IL31RA	7772	0.318	-0.0947	No
83	CXCL12	7857	0.306	-0.0977	No
84	LY75	8355	0.239	-0.1201	No
85	CALCA	8482	0.219	-0.1253	No
86	INHA	8502	0.217	-0.1256	No
87	SLA2	8586	0.206	-0.1289	No
88	IL17A	8790	0.176	-0.1378	No
89	IL10	9221	0.117	-0.1573	No
90	TBX1	9357	0.096	-0.1633	No
91	YTHDF2	9436	0.083	-0.1667	No
92	IL21	9457	0.080	-0.1674	No
93	THY1	9592	0.061	-0.1734	No
94	DMBT1	9604	0.060	-0.1738	No
95	APOA2	9627	0.055	-0.1747	No
96	FTH1	9649	0.051	-0.1755	No
97	BNIP3	9666	0.049	-0.1761	No
98	SEMA3C	9713	0.042	-0.1781	No
99	OPRD1	9746	0.036	-0.1795	No
100	DEFB103A	9900	0.012	-0.1865	No
101	FYB	9940	0.005	-0.1883	No
102	TLR8	9998	-0.004	-0.1910	No
103	CCL20	10016	-0.007	-0.1917	No
104	IL18	10222	-0.036	-0.2011	No
105	BLNK	10309	-0.050	-0.2049	No
106	MLF1	10558	-0.087	-0.2161	No
107	CD97	10755	-0.116	-0.2249	No
108	SCG2	10945	-0.147	-0.2332	No
109	IL15	11599	-0.228	-0.2628	No
110	FCGRT	11767	-0.247	-0.2698	No
111	EREG	12034	-0.276	-0.2814	No
112	MBL2	12175	-0.292	-0.2871	No
113	SPACA3	12198	-0.294	-0.2873	No
114	IK	12222	-0.297	-0.2876	No
115	TRAF2	12318	-0.311	-0.2912	No
116	CARTPT	12337	-0.313	-0.2912	No
117	CTSE	12348	-0.315	-0.2908	No
118	PRG3	12370	-0.317	-0.2910	No
119	CNIH	12483	-0.329	-0.2953	No
120	DEFB4	12745	-0.361	-0.3064	No
121	POU2F2	12770	-0.364	-0.3065	No
122	DYRK3	12796	-0.367	-0.3067	No
123	LTB4R	12852	-0.373	-0.3083	No
124	IL12A	12986	-0.388	-0.3134	No
125	SEMA7A	13073	-0.400	-0.3163	No
126	CD276	13122	-0.405	-0.3175	No
127	SCYE1	13358	-0.434	-0.3272	No
128	CCL19	13388	-0.437	-0.3274	No
129	TARBP2	13435	-0.443	-0.3284	No
130	CCR1	13552	-0.456	-0.3325	No
131	LY86	13558	-0.456	-0.3316	No
132	CTSG	13568	-0.457	-0.3308	No
133	CHST4	13576	-0.458	-0.3299	No
134	C5AR1	13581	-0.458	-0.3289	No
135	CRHR1	13729	-0.477	-0.3344	No
136	SIT1	13995	-0.508	-0.3453	No
137	HDAC7A	14057	-0.515	-0.3468	No
138	HRH2	14152	-0.526	-0.3497	No
139	IL18BP	14288	-0.543	-0.3546	No
140	CMKLR1	14438	-0.561	-0.3600	No
141	IL28RA	14452	-0.563	-0.3591	No
142	FCGR3A	14464	-0.564	-0.3581	No
143	LRMP	14660	-0.591	-0.3656	No
144	TCF7	14663	-0.592	-0.3641	No
145	RPS19	14743	-0.600	-0.3662	No
146	PRL	14765	-0.602	-0.3656	No
147	WAS	14950	-0.623	-0.3724	No
148	CD3D	14982	-0.626	-0.3722	No
149	RASGRP4	15158	-0.647	-0.3786	No
150	BST2	15229	-0.655	-0.3801	No
151	OPRK1	15238	-0.656	-0.3788	No
152	CD96	15311	-0.666	-0.3804	No
153	UBE2N	15327	-0.668	-0.3793	No
154	JAG2	15378	-0.674	-0.3798	No
155	IL17B	15461	-0.684	-0.3818	No
156	LIG1	15585	-0.699	-0.3857	No
157	IKBKAP	15694	-0.715	-0.3888	No
158	TREM1	15981	-0.754	-0.4000	No
159	IL6	16016	-0.760	-0.3996	No
160	AQP9	16102	-0.772	-0.4015	No
161	NHEJ1	16129	-0.774	-0.4007	No
162	ZAP70	16176	-0.781	-0.4008	No
163	CTSC	16368	-0.806	-0.4075	No
164	GBP2	16369	-0.806	-0.4053	No
165	CD40LG	16375	-0.807	-0.4035	No
166	CD3E	16458	-0.818	-0.4051	No
167	CD34	16470	-0.819	-0.4035	No
168	GPR44	16487	-0.821	-0.4021	No
169	GEM	16500	-0.823	-0.4005	No
170	CSF1	16524	-0.826	-0.3994	No
171	C2	16556	-0.830	-0.3986	No
172	CD79B	16562	-0.830	-0.3967	No
173	SFTPD	16639	-0.840	-0.3980	No
174	TPD52	16722	-0.851	-0.3995	No
175	SP2	16973	-0.887	-0.4087	No
176	CXCR4	17018	-0.894	-0.4084	No
177	NFIL3	17281	-0.934	-0.4181	No
178	TNFSF13	17322	-0.941	-0.4175	No
179	CCR6	17391	-0.953	-0.4181	No
180	IL7R	17421	-0.957	-0.4169	No
181	MAFB	17493	-0.971	-0.4177	No
182	IL1R2	17621	-0.994	-0.4209	No
183	CXCL13	17683	-1.004	-0.4211	No
184	IFITM3	17691	-1.006	-0.4188	No
185	GPR65	17717	-1.009	-0.4173	No
186	GTPBP1	17765	-1.017	-0.4168	No
187	NCK2	17832	-1.027	-0.4172	No
188	CCRL1	17856	-1.033	-0.4155	No
189	PRKRA	17878	-1.038	-0.4138	No
190	NFAM1	17899	-1.042	-0.4120	No
191	TREM2	17996	-1.057	-0.4136	No
192	PSMB10	18105	-1.077	-0.4158	No
193	LST1	18181	-1.089	-0.4164	No
194	SEMA4D	18316	-1.118	-0.4197	No
195	SPINK5	18471	-1.148	-0.4238	No
196	ACVR2A	18496	-1.154	-0.4219	No
197	CIITA	18497	-1.154	-0.4189	No
198	C1QBP	18518	-1.157	-0.4167	No
199	BCL2	18625	-1.179	-0.4185	No
200	CCL2	18809	-1.219	-0.4238	No
201	TGFB2	18912	-1.243	-0.4253	Yes
202	IKBKG	18928	-1.246	-0.4227	Yes
203	NOTCH2	18991	-1.260	-0.4222	Yes
204	ZBTB16	18997	-1.261	-0.4192	Yes
205	HDAC9	19004	-1.263	-0.4161	Yes
206	PTGER4	19069	-1.275	-0.4158	Yes
207	APOA4	19157	-1.298	-0.4164	Yes
208	INHBA	19192	-1.307	-0.4145	Yes
209	APOA1	19366	-1.357	-0.4190	Yes
210	VIPR1	19503	-1.394	-0.4216	Yes
211	MADCAM1	19568	-1.416	-0.4208	Yes
212	ACIN1	19579	-1.419	-0.4176	Yes
213	IL12B	19697	-1.458	-0.4192	Yes
214	CD4	19717	-1.467	-0.4162	Yes
215	SAA1	19848	-1.512	-0.4182	Yes
216	IL7	19888	-1.525	-0.4160	Yes
217	HCLS1	19929	-1.540	-0.4139	Yes
218	IL4R	19931	-1.540	-0.4099	Yes
219	SPI1	20025	-1.580	-0.4100	Yes
220	FYN	20107	-1.612	-0.4095	Yes
221	LDB1	20147	-1.628	-0.4071	Yes
222	DPP8	20210	-1.656	-0.4056	Yes
223	SECTM1	20218	-1.661	-0.4016	Yes
224	CRTAM	20319	-1.706	-0.4017	Yes
225	CCR5	20354	-1.722	-0.3988	Yes
226	IGSF6	20360	-1.724	-0.3945	Yes
227	CX3CL1	20401	-1.741	-0.3918	Yes
228	LCP2	20409	-1.744	-0.3875	Yes
229	NCF4	20437	-1.760	-0.3842	Yes
230	SART1	20474	-1.779	-0.3812	Yes
231	RAB3D	20563	-1.828	-0.3805	Yes
232	EDG6	20617	-1.855	-0.3780	Yes
233	RFX1	20626	-1.862	-0.3735	Yes
234	ATP6V0A2	20646	-1.875	-0.3695	Yes
235	SNRK	20712	-1.916	-0.3675	Yes
236	ACVR1B	20827	-1.983	-0.3676	Yes
237	MYST1	20904	-2.033	-0.3657	Yes
238	CD274	20948	-2.069	-0.3623	Yes
239	LTF	20956	-2.072	-0.3572	Yes
240	IL16	21037	-2.143	-0.3553	Yes
241	ELF4	21041	-2.147	-0.3498	Yes
242	EBI3	21047	-2.149	-0.3444	Yes
243	LIG3	21049	-2.151	-0.3388	Yes
244	IL6ST	21050	-2.151	-0.3332	Yes
245	IL10RB	21090	-2.188	-0.3293	Yes
246	NCOA6	21144	-2.230	-0.3259	Yes
247	MAP4K2	21147	-2.232	-0.3201	Yes
248	HDAC5	21150	-2.234	-0.3144	Yes
249	CKLF	21154	-2.242	-0.3086	Yes
250	BCL10	21159	-2.247	-0.3029	Yes
251	CTSS	21186	-2.279	-0.2982	Yes
252	TNFAIP1	21213	-2.303	-0.2933	Yes
253	IL6R	21241	-2.335	-0.2885	Yes
254	FOXP3	21314	-2.435	-0.2854	Yes
255	ANXA11	21360	-2.498	-0.2809	Yes
256	ARHGDIB	21394	-2.566	-0.2757	Yes
257	LAX1	21425	-2.616	-0.2703	Yes
258	TAPBP	21470	-2.730	-0.2652	Yes
259	MBP	21512	-2.822	-0.2597	Yes
260	TNFRSF14	21534	-2.867	-0.2531	Yes
261	TGFB1	21573	-2.995	-0.2470	Yes
262	IRF8	21610	-3.117	-0.2405	Yes
263	CNR2	21631	-3.181	-0.2331	Yes
264	IL2RG	21665	-3.322	-0.2260	Yes
265	CD79A	21671	-3.365	-0.2174	Yes
266	CTSW	21672	-3.373	-0.2085	Yes
267	MMP9	21679	-3.409	-0.1999	Yes
268	FCGR2B	21689	-3.450	-0.1913	Yes
269	PDCD1	21717	-3.625	-0.1830	Yes
270	CD74	21718	-3.626	-0.1735	Yes
271	CD7	21729	-3.696	-0.1643	Yes
272	MYH9	21766	-3.969	-0.1556	Yes
273	CCR4	21861	-4.910	-0.1471	Yes
274	POU2AF1	21866	-4.982	-0.1342	Yes
275	CD83	21872	-5.185	-0.1209	Yes
276	IL27RA	21874	-5.232	-0.1072	Yes
277	ITGB2	21875	-5.244	-0.0935	Yes
278	TNFRSF4	21877	-5.296	-0.0796	Yes
279	CCL22	21893	-5.744	-0.0653	Yes
280	EBI2	21905	-6.015	-0.0501	Yes
281	CCR8	21912	-6.302	-0.0338	Yes
282	ST6GAL1	21925	-6.682	-0.0169	Yes
283	CD2	21926	-6.817	0.0010	Yes